Factsheet for GSMUA_Achr9P14090_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P05460_001	Banana	nucleus	82.31	76.98
GSMUA_Achr8P23850_001	Banana	nucleus	79.45	67.76
GSMUA_Achr5P05010_001	Banana	nucleus	63.52	66.36
GSMUA_Achr8P13630_001	Banana	cytosol, nucleus, plastid	20.44	62.21
GSMUA_Achr6P01740_001	Banana	nucleus	67.25	58.9
Os06t0702600-01	Rice	nucleus	63.74	58.53
EER90336	Sorghum	nucleus	71.43	56.08
Os02t0141100-00	Rice	nucleus	67.69	55.2
TraesCS6D01G102300.1	Wheat	nucleus	67.58	54.47
TraesCS7A01G416400.1	Wheat	nucleus	70.0	54.31
VIT_11s0065g00310.t01	Wine grape	nucleus	66.48	54.26
TraesCS7B01G316600.1	Wheat	nucleus	70.0	54.26
Zm00001d014690_P014	Maize	nucleus	70.99	54.1
TraesCS7D01G409700.1	Wheat	nucleus	69.78	54.04
TraesCS6B01G141300.2	Wheat	nucleus	67.03	53.93
TraesCS6A01G113000.1	Wheat	nucleus	67.14	53.83
HORVU6Hr1G020330.30	Barley	nucleus	67.47	53.81
OQU84350	Sorghum	nucleus	63.19	53.74
GSMUA_Achr3P10240_001	Banana	nucleus	36.48	53.55
Solyc07g016180.2.1	Tomato	nucleus	63.85	52.25
HORVU7Hr1G096460.7	Barley	mitochondrion, nucleus, vacuole	68.79	52.08
Zm00001d015243_P001	Maize	nucleus	62.42	52.01
PGSC0003DMT400025312	Potato	nucleus	63.41	51.8
KRH49070	Soybean	nucleus	61.1	50.09
GSMUA_Achr9P18170_001	Banana	nucleus	46.92	50.0
PGSC0003DMT400035592	Potato	nucleus	59.45	49.32
Solyc05g047460.2.1	Tomato	nucleus	59.34	49.23
KRH74145	Soybean	nucleus	59.56	49.09
KRH60117	Soybean	nucleus	57.36	47.5
KRH41404	Soybean	nucleus	57.25	46.81
GSMUA_AchrUn_...	Banana	mitochondrion	25.6	45.6
GSMUA_Achr3P23290_001	Banana	nucleus	40.33	44.76
GSMUA_Achr5P26580_001	Banana	nucleus	39.34	44.36
GSMUA_Achr5P02450_001	Banana	nucleus	40.33	44.32
GSMUA_Achr4P25960_001	Banana	nucleus	38.68	43.95
GSMUA_Achr11P...	Banana	nucleus	39.89	43.79
GSMUA_Achr1P20040_001	Banana	nucleus	36.92	42.97
GSMUA_Achr11P...	Banana	nucleus	38.24	42.96
GSMUA_Achr6P19850_001	Banana	nucleus	39.89	42.46
GSMUA_Achr5P00590_001	Banana	nucleus	40.99	41.03
GSMUA_Achr11P...	Banana	nucleus	40.55	40.42
GSMUA_Achr1P08230_001	Banana	mitochondrion	28.68	39.31
GSMUA_Achr6P36980_001	Banana	nucleus	36.92	39.16
GSMUA_Achr9P08310_001	Banana	vacuole	20.44	38.19
GSMUA_Achr2P19760_001	Banana	nucleus	26.92	36.68
GSMUA_Achr6P07390_001	Banana	nucleus	26.15	36.34
GSMUA_Achr10P...	Banana	nucleus	26.48	36.13
GSMUA_Achr10P...	Banana	nucleus	26.59	35.91
GSMUA_Achr6P12780_001	Banana	nucleus	27.25	35.63
GSMUA_AchrUn_...	Banana	nucleus	24.29	34.8
GSMUA_Achr6P29070_001	Banana	nucleus, vacuole	26.48	34.58
GSMUA_Achr7P24330_001	Banana	nucleus	24.4	33.33
GSMUA_Achr1P20000_001	Banana	nucleus	35.27	33.06
GSMUA_Achr6P08090_001	Banana	nucleus	29.12	32.16
GSMUA_Achr10P...	Banana	nucleus	28.02	30.95
GSMUA_Achr8P13620_001	Banana	nucleus	16.37	30.79
GSMUA_Achr6P16450_001	Banana	nucleus	29.12	30.36
GSMUA_AchrUn_...	Banana	nucleus	28.79	29.64
GSMUA_Achr1P20010_001	Banana	plasma membrane, plastid	33.96	29.43

Protein Annotations

MapMan:15.5.5.1	Gene3D:2.30.30.1040	Gene3D:2.40.330.10	Gene3D:3.10.20.90	InterPro:AUX/IAA_dom	InterPro:Auxin_resp
InterPro:B3_DNA-bd	ncoils:Coil	InterPro:DNA-bd_pseudobarrel_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009725	GO:GO:0009734	GO:GO:0009987
EnsemblPlantsGene:GSMUA_Achr9G14090_001	EnsemblPlants:GSMUA_Achr9P14090_001	EnsemblPlants:GSMUA_Achr9T14090_001	InterPro:IPR000270	InterPro:IPR003340	InterPro:IPR015300
UniProt:M0U067	InterPro:PB1_dom	PFAM:PF02309	PFAM:PF02362	PFAM:PF06507	PFscan:PS50863
PFscan:PS51745	PANTHER:PTHR31384	PANTHER:PTHR31384:SF9	SMART:SM01019	SUPFAM:SSF101936	SUPFAM:SSF54277
UniParc:UPI000296E740	SEG:seg	:	:	:	:

Description

Auxin response factor 5 [Source:GMGC_GENE;Acc:GSMUA_Achr9G14090_001]

Coordinates

chr9:+:9160518..9169966

Molecular Weight (calculated)

101297.0 Da

IEP (calculated)

6.469

GRAVY (calculated)

-0.500

Length

910 amino acids

Sequence
(BLAST)

001: MKADASGAAA PSPCEGERKT INPELWYACA GPLVTVPPVG SLVVYFPQGH SEQMVEPNFV AASMQKDINA HIPNYPNLPS KLICLLHNVT LHADPETDEV
101: YAQMTLQPVN SYDKEALQAS ELALKQTRPQ TEFFCKTLTA SDTSTHGGFS VPRRAAEKIF PSLDFSMQPP AQELQARDLH DNLWTFRHIY RGQPKRHLLT
201: TGWSLFVSGK RLFAGDSVLF IRDKKQQLLL GIRRANRQPT NLSSSVLSTD SMHIGILAAA AHAAANHSPF TVFYNPRASP SEFVIPFAKY QKAVYSNQVS
301: LGMRFRMMFE TEELGTRRYM GTITGISDLD PVRWKNSQWR NLQVGWDESA AGERRNRVSI WEIEPVVAPF FICPPPFFGK RPRQPGMQDD ESSEMENLFK
401: RAMPWLGEEI CIKDSQTQST IMPGLSLVQW MNMQQNPSLG NQTLQTEYLR SLAVGAFSRP PQQVQDLAMQ QKQQLQQQQQ HQQLQQQYQQ AQSRMPVKLP
501: VQVNQQLSDQ QIQLQLLQKL QQEQQQQALF SQPRLCNSNS LVQQPLIPQQ CAKTTSQAVR LPQILQNQSQ QKPQQQQIPS SDFPEAVLST TPVTNLIPAS
601: GSSLLAAGGT QSGVTDDIPS CSTSPSANNG SILPHSILNR NGHHNLISTE KTSQSVITML NPSSFEAATT YLSNTAQMDY LDTTSSATSP SMLRYAPPES
701: DIPGTDPRNN VLFGVNIDGS MGIPLTADAL LVNNIDSGKF QNHIPGDAVA NYSTSKDAQQ ELNSWAPAPP PTIQRMRTYT KVYKRGAVGR SMDITRYSGY
801: DELKHDLARM FSIEGQLEDR QRIGWKLVYV DHENDVLLVG DDPWEEFVSC VRCIKILSPQ EVQQMSLDVD LGNNSLPNQA CSSSDGGNAW RGQCDQNSGN
901: PSAGSYDHFE

Best Arabidopsis Sequence Match ( AT1G19220.1 )
(BLAST)

0001: MKAPSNGFLP SSNEGEKKPI NSQLWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMQKQ TDFIPNYPNL PSKLICLLHS VTLHADTETD EVYAQMTLQP
0101: VNKYDREALL ASDMGLKLNR QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIVAKD LHDTTWTFRH IYRGQPKRHL LTTGWSVFVS
0201: TKRLFAGDSV LFVRDEKSQL MLGIRRANRQ TPTLSSSVIS SDSMHIGILA AAAHANANSS PFTIFFNPRA SPSEFVVPLA KYNKALYAQV SLGMRFRMMF
0301: ETEDCGVRRY MGTVTGISDL DPVRWKGSQW RNLQVGWDES TAGDRPSRVS IWEIEPVITP FYICPPPFFR PKYPRQPGMP DDELDMENAF KRAMPWMGED
0401: FGMKDAQSSM FPGLSLVQWM SMQQNNPLSG SATPQLPSAL SSFNLPNNFA SNDPSKLLNF QSPNLSSANS QFNKPNTVNH ISQQMQAQPA MVKSQQQQQQ
0501: QQQQHQHQQQ QLQQQQQLQM SQQQVQQQGI YNNGTIAVAN QVSCQSPNQP TGFSQSQLQQ QSMLPTGAKM THQNINSMGN KGLSQMTSFA QEMQFQQQLE
0601: MHNSSQLLRN QQEQSSLHSL QQNLSQNPQQ LQMQQQSSKP SPSQQLQLQL LQKLQQQQQQ QSIPPVSSSL QPQLSALQQT QSHQLQQLLS SQNQQPLAHG
0701: NNSFPASTFM QPPQIQVSPQ QQGQMSNKNL VAAGRSHSGH TDGEAPSCST SPSANNTGHD NVSPTNFLSR NQQQGQAASV SASDSVFERA SNPVQELYTK
0801: TESRISQGMM NMKSAGEHFR FKSAVTDQID VSTAGTTYCP DVVGPVQQQQ TFPLPSFGFD GDCQSHHPRN NLAFPGNLEA VTSDPLYSQK DFQNLVPNYG
0901: NTPRDIETEL SSAAISSQSF GIPSIPFKPG CSNEVGGIND SGIMNGGGLW PNQTQRMRTY TKVQKRGSVG RSIDVTRYSG YDELRHDLAR MFGIEGQLED
1001: PLTSDWKLVY TDHENDILLV GDDPWEEFVN CVQNIKILSS VEVQQMSLDG DLAAIPTTNQ ACSETDSGNA WKVHYEDTSA AASFNR

Arabidopsis Description

ARF19Auxin response factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q8RYC8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.