Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g016180.2.1 | Tomato | nucleus | 97.49 | 97.66 |
| PGSC0003DMT400035592 | Potato | nucleus | 78.37 | 79.58 |
| VIT_11s0065g00310.t01 | Wine grape | nucleus | 77.2 | 77.13 |
| KRH49070 | Soybean | nucleus | 69.3 | 69.55 |
| KRH74145 | Soybean | nucleus | 66.61 | 67.21 |
| KRH60117 | Soybean | nucleus | 64.27 | 65.15 |
| KRH41404 | Soybean | nucleus | 64.99 | 65.05 |
| GSMUA_Achr3P05460_001 | Banana | nucleus | 55.83 | 63.93 |
| GSMUA_Achr9P14090_001 | Banana | nucleus | 51.8 | 63.41 |
| Os06t0702600-01 | Rice | nucleus | 54.4 | 61.15 |
| Os08t0520550-01 | Rice | nucleus | 34.02 | 59.5 |
| GSMUA_Achr5P05010_001 | Banana | nucleus | 46.23 | 59.13 |
| GSMUA_Achr6P01740_001 | Banana | nucleus | 54.31 | 58.23 |
| Os08t0520500-01 | Rice | cytosol | 2.6 | 58.0 |
| GSMUA_Achr8P23850_001 | Banana | nucleus | 55.21 | 57.64 |
| EER90336 | Sorghum | nucleus | 58.26 | 56.0 |
| Os02t0141100-00 | Rice | nucleus | 55.39 | 55.29 |
| TraesCS7B01G316600.1 | Wheat | nucleus | 58.26 | 55.28 |
| TraesCS7A01G416400.1 | Wheat | nucleus | 58.17 | 55.24 |
| TraesCS7D01G409700.1 | Wheat | nucleus | 58.26 | 55.23 |
| TraesCS6D01G102300.1 | Wheat | nucleus | 55.57 | 54.83 |
| TraesCS7A01G252000.2 | Wheat | nucleus | 53.41 | 54.74 |
| TraesCS7D01G250100.4 | Wheat | nucleus | 53.59 | 54.67 |
| HORVU7Hr1G051930.4 | Barley | nucleus | 53.05 | 54.57 |
| TraesCS7B01G138900.6 | Wheat | nucleus | 53.5 | 54.48 |
| TraesCS6B01G141300.2 | Wheat | nucleus | 55.3 | 54.47 |
| TraesCS6A01G113000.1 | Wheat | nucleus | 55.48 | 54.45 |
| HORVU6Hr1G020330.30 | Barley | nucleus | 55.48 | 54.16 |
| OQU84350 | Sorghum | nucleus | 51.8 | 53.93 |
| Zm00001d014690_P014 | Maize | nucleus | 57.54 | 53.69 |
| Zm00001d031522_P007 | Maize | nucleus | 52.24 | 53.59 |
| HORVU7Hr1G096460.7 | Barley | mitochondrion, nucleus, vacuole | 57.72 | 53.49 |
| EES15359 | Sorghum | nucleus | 52.42 | 53.33 |
| Zm00001d015243_P001 | Maize | nucleus | 50.54 | 51.56 |
| PGSC0003DMT400006151 | Potato | nucleus | 47.76 | 45.98 |
| PGSC0003DMT400041127 | Potato | nucleus | 35.46 | 44.28 |
| PGSC0003DMT400048034 | Potato | nucleus | 29.89 | 44.28 |
| PGSC0003DMT400074169 | Potato | nucleus | 33.66 | 42.42 |
| PGSC0003DMT400009660 | Potato | nucleus | 34.83 | 41.77 |
| PGSC0003DMT400048032 | Potato | nucleus | 6.01 | 41.1 |
| PGSC0003DMT400053380 | Potato | nucleus | 22.44 | 38.23 |
| PGSC0003DMT400031965 | Potato | nucleus | 21.01 | 35.73 |
| PGSC0003DMT400000345 | Potato | nucleus | 21.45 | 34.89 |
| PGSC0003DMT400037454 | Potato | nucleus | 25.49 | 34.26 |
| PGSC0003DMT400036765 | Potato | nucleus | 25.31 | 33.37 |
| PGSC0003DMT400020839 | Potato | nucleus | 21.9 | 30.09 |
Protein Annotations
| EntrezGene:102592438 | MapMan:15.5.5.1 | Gene3D:2.30.30.1040 | Gene3D:2.40.330.10 | Gene3D:3.10.20.90 | ProteinID:ACV31211 |
| ProteinID:ACV31211.1 | InterPro:AUX/IAA_dom | InterPro:Auxin_resp | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009725 |
| GO:GO:0009734 | GO:GO:0009987 | EMBL:GQ386949 | InterPro:IPR000270 | InterPro:IPR003340 | InterPro:IPR015300 |
| UniProt:M1ALA4 | InterPro:PB1_dom | PFAM:PF02309 | PFAM:PF02362 | PFAM:PF06507 | EnsemblPlantsGene:PGSC0003DMG400009773 |
| PGSC:PGSC0003DMG400009773 | EnsemblPlants:PGSC0003DMT400025312 | PFscan:PS50863 | PFscan:PS51745 | PANTHER:PTHR31384 | PANTHER:PTHR31384:SF9 |
| SMART:SM01019 | SUPFAM:SSF101936 | SUPFAM:SSF54277 | UniParc:UPI000294FD74 | RefSeq:XP_006365636.1 | SEG:seg |
Description
Auxin response factor 19 [Source:PGSC_GENE;Acc:PGSC0003DMG400009773]
Coordinates
chr7:-:9124243..9131912
Molecular Weight (calculated)
123663.0 Da
IEP (calculated)
6.551
GRAVY (calculated)
-0.567
Length
1114 amino acids
Sequence
(BLAST)
(BLAST)
0001: MKTPANTAGV QQQQQHTVNG NHPAEVEKKS INPELWQACA GPLVNLPAAG THVVYFPQGH SEQVAASMKK DVDAQIPNYP NLPSKLVCLL HNITLHADPE
0101: TDEVYAQMTL QPVPSFDKEA LLRSDLSMKL NKPQTEFFCK TLTASDTSTH GGFSVPRRSA EKIFPPLDYS MQPPAQELVA RDLHDNLWTF RHIYRGQPKR
0201: HLLTTGWSLF VSGKRLFAGD SVLFIRDEKQ QLLLGIRRAN RQPTNLSSSV LSSDSMHIGI LAAAAHAAAN NSPFTVFYNP RASPSEFVIP LAKYYKATYS
0301: CQVSLGMRFR MMFETEESGT RRYMGTITGI SDLDPVRWKN SQWRNLQVGW DESTAGERRN RVSIWEIEPV TAPFFICPTP PFFRSKRPRL PGMPDDDCSD
0401: LDGLFKRTMP WLGDDFGMKD PQGLPGLSLV QWMNMQQNPS LANSMQPNYL HSLSGSVLQN VGGGADLSRQ LGLPAPQLPQ QNTLQFGAQR PTQQVQQLDQ
0501: LQKLPTTTLS PAGSIMQSQQ QLSDISQQPR QNLINQSVPT NHVQAQLLQA QSLVQSQNVL QQQQSFQNQL QRNLPQNLPQ QQQIMNQTQQ QSFMPPQPND
0601: PLNQQLHFSD NQLQMQLLQK LQQQSLLAQQ SLLQQPSQLM PIQDQQKHID VSQNFSRSLA TSQMLDMSQT TSTSTTLSQP QVAQQQMTIN NSQSNLRFAQ
0701: PNQHMKQQQQ QQPGILPEIP GQVGQILPPT TNQLSANCSS FLTGAVGGGQ SVVTDDIPSC STSPSTNNCQ NVVQPIMNGR IHRGTAAADE TTQSSLPLLS
0801: SSGLEAMSPN RNLVKDLQQK PDVKPSLNIS KSQNHGFSTP QTYLNTAVPQ MDYLDSSSSA TSVYFSQNDV QLQQTTNPMS FSSQAVVFRD SQDGEVQGDP
0901: RNSVAFGANM DNQLGISMMP DSLITNSLVG SRKDVSNNIS SGGGMLSSYE NPKDAQPELS SSIVSQSFGV PDMAFNSIDS TINEGSFMNR GAWAPPPQMP
1001: RMRTFTKVHK RGAVGRSIDI TRYSGYEELK QDLARRFGIE GQLEDRQRIG WKLVYVDHEN DDLLVGDDPW EEFVNCVRCI KILSPQEVQQ MSLDGDFGYN
1101: VQNQAFSSSD GGNM
0101: TDEVYAQMTL QPVPSFDKEA LLRSDLSMKL NKPQTEFFCK TLTASDTSTH GGFSVPRRSA EKIFPPLDYS MQPPAQELVA RDLHDNLWTF RHIYRGQPKR
0201: HLLTTGWSLF VSGKRLFAGD SVLFIRDEKQ QLLLGIRRAN RQPTNLSSSV LSSDSMHIGI LAAAAHAAAN NSPFTVFYNP RASPSEFVIP LAKYYKATYS
0301: CQVSLGMRFR MMFETEESGT RRYMGTITGI SDLDPVRWKN SQWRNLQVGW DESTAGERRN RVSIWEIEPV TAPFFICPTP PFFRSKRPRL PGMPDDDCSD
0401: LDGLFKRTMP WLGDDFGMKD PQGLPGLSLV QWMNMQQNPS LANSMQPNYL HSLSGSVLQN VGGGADLSRQ LGLPAPQLPQ QNTLQFGAQR PTQQVQQLDQ
0501: LQKLPTTTLS PAGSIMQSQQ QLSDISQQPR QNLINQSVPT NHVQAQLLQA QSLVQSQNVL QQQQSFQNQL QRNLPQNLPQ QQQIMNQTQQ QSFMPPQPND
0601: PLNQQLHFSD NQLQMQLLQK LQQQSLLAQQ SLLQQPSQLM PIQDQQKHID VSQNFSRSLA TSQMLDMSQT TSTSTTLSQP QVAQQQMTIN NSQSNLRFAQ
0701: PNQHMKQQQQ QQPGILPEIP GQVGQILPPT TNQLSANCSS FLTGAVGGGQ SVVTDDIPSC STSPSTNNCQ NVVQPIMNGR IHRGTAAADE TTQSSLPLLS
0801: SSGLEAMSPN RNLVKDLQQK PDVKPSLNIS KSQNHGFSTP QTYLNTAVPQ MDYLDSSSSA TSVYFSQNDV QLQQTTNPMS FSSQAVVFRD SQDGEVQGDP
0901: RNSVAFGANM DNQLGISMMP DSLITNSLVG SRKDVSNNIS SGGGMLSSYE NPKDAQPELS SSIVSQSFGV PDMAFNSIDS TINEGSFMNR GAWAPPPQMP
1001: RMRTFTKVHK RGAVGRSIDI TRYSGYEELK QDLARRFGIE GQLEDRQRIG WKLVYVDHEN DDLLVGDDPW EEFVNCVRCI KILSPQEVQQ MSLDGDFGYN
1101: VQNQAFSSSD GGNM
0001: MKAPSNGFLP SSNEGEKKPI NSQLWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMQKQ TDFIPNYPNL PSKLICLLHS VTLHADTETD EVYAQMTLQP
0101: VNKYDREALL ASDMGLKLNR QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIVAKD LHDTTWTFRH IYRGQPKRHL LTTGWSVFVS
0201: TKRLFAGDSV LFVRDEKSQL MLGIRRANRQ TPTLSSSVIS SDSMHIGILA AAAHANANSS PFTIFFNPRA SPSEFVVPLA KYNKALYAQV SLGMRFRMMF
0301: ETEDCGVRRY MGTVTGISDL DPVRWKGSQW RNLQVGWDES TAGDRPSRVS IWEIEPVITP FYICPPPFFR PKYPRQPGMP DDELDMENAF KRAMPWMGED
0401: FGMKDAQSSM FPGLSLVQWM SMQQNNPLSG SATPQLPSAL SSFNLPNNFA SNDPSKLLNF QSPNLSSANS QFNKPNTVNH ISQQMQAQPA MVKSQQQQQQ
0501: QQQQHQHQQQ QLQQQQQLQM SQQQVQQQGI YNNGTIAVAN QVSCQSPNQP TGFSQSQLQQ QSMLPTGAKM THQNINSMGN KGLSQMTSFA QEMQFQQQLE
0601: MHNSSQLLRN QQEQSSLHSL QQNLSQNPQQ LQMQQQSSKP SPSQQLQLQL LQKLQQQQQQ QSIPPVSSSL QPQLSALQQT QSHQLQQLLS SQNQQPLAHG
0701: NNSFPASTFM QPPQIQVSPQ QQGQMSNKNL VAAGRSHSGH TDGEAPSCST SPSANNTGHD NVSPTNFLSR NQQQGQAASV SASDSVFERA SNPVQELYTK
0801: TESRISQGMM NMKSAGEHFR FKSAVTDQID VSTAGTTYCP DVVGPVQQQQ TFPLPSFGFD GDCQSHHPRN NLAFPGNLEA VTSDPLYSQK DFQNLVPNYG
0901: NTPRDIETEL SSAAISSQSF GIPSIPFKPG CSNEVGGIND SGIMNGGGLW PNQTQRMRTY TKVQKRGSVG RSIDVTRYSG YDELRHDLAR MFGIEGQLED
1001: PLTSDWKLVY TDHENDILLV GDDPWEEFVN CVQNIKILSS VEVQQMSLDG DLAAIPTTNQ ACSETDSGNA WKVHYEDTSA AASFNR
0101: VNKYDREALL ASDMGLKLNR QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIVAKD LHDTTWTFRH IYRGQPKRHL LTTGWSVFVS
0201: TKRLFAGDSV LFVRDEKSQL MLGIRRANRQ TPTLSSSVIS SDSMHIGILA AAAHANANSS PFTIFFNPRA SPSEFVVPLA KYNKALYAQV SLGMRFRMMF
0301: ETEDCGVRRY MGTVTGISDL DPVRWKGSQW RNLQVGWDES TAGDRPSRVS IWEIEPVITP FYICPPPFFR PKYPRQPGMP DDELDMENAF KRAMPWMGED
0401: FGMKDAQSSM FPGLSLVQWM SMQQNNPLSG SATPQLPSAL SSFNLPNNFA SNDPSKLLNF QSPNLSSANS QFNKPNTVNH ISQQMQAQPA MVKSQQQQQQ
0501: QQQQHQHQQQ QLQQQQQLQM SQQQVQQQGI YNNGTIAVAN QVSCQSPNQP TGFSQSQLQQ QSMLPTGAKM THQNINSMGN KGLSQMTSFA QEMQFQQQLE
0601: MHNSSQLLRN QQEQSSLHSL QQNLSQNPQQ LQMQQQSSKP SPSQQLQLQL LQKLQQQQQQ QSIPPVSSSL QPQLSALQQT QSHQLQQLLS SQNQQPLAHG
0701: NNSFPASTFM QPPQIQVSPQ QQGQMSNKNL VAAGRSHSGH TDGEAPSCST SPSANNTGHD NVSPTNFLSR NQQQGQAASV SASDSVFERA SNPVQELYTK
0801: TESRISQGMM NMKSAGEHFR FKSAVTDQID VSTAGTTYCP DVVGPVQQQQ TFPLPSFGFD GDCQSHHPRN NLAFPGNLEA VTSDPLYSQK DFQNLVPNYG
0901: NTPRDIETEL SSAAISSQSF GIPSIPFKPG CSNEVGGIND SGIMNGGGLW PNQTQRMRTY TKVQKRGSVG RSIDVTRYSG YDELRHDLAR MFGIEGQLED
1001: PLTSDWKLVY TDHENDILLV GDDPWEEFVN CVQNIKILSS VEVQQMSLDG DLAAIPTTNQ ACSETDSGNA WKVHYEDTSA AASFNR
Arabidopsis Description
ARF19Auxin response factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q8RYC8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.