Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G250100.4 | Wheat | nucleus | 98.34 | 97.89 |
| TraesCS7B01G138900.6 | Wheat | nucleus | 98.07 | 97.44 |
| HORVU7Hr1G051930.4 | Barley | nucleus | 95.49 | 95.84 |
| Os08t0520500-01 | Rice | cytosol | 3.77 | 82.0 |
| Os08t0520550-01 | Rice | nucleus | 47.65 | 81.32 |
| EES15359 | Sorghum | nucleus | 78.29 | 77.72 |
| Zm00001d031522_P007 | Maize | nucleus | 76.91 | 76.98 |
| VIT_11s0065g00310.t01 | Wine grape | nucleus | 57.04 | 55.61 |
| GSMUA_Achr6P01740_001 | Banana | nucleus | 51.52 | 53.9 |
| TraesCS6A01G113000.1 | Wheat | nucleus | 55.93 | 53.57 |
| Solyc07g016180.2.1 | Tomato | nucleus | 54.74 | 53.51 |
| PGSC0003DMT400025312 | Potato | nucleus | 54.74 | 53.41 |
| KRH49070 | Soybean | nucleus | 53.73 | 52.61 |
| TraesCS7A01G416400.1 | Wheat | nucleus | 56.76 | 52.6 |
| PGSC0003DMT400035592 | Potato | nucleus | 52.35 | 51.87 |
| Solyc05g047460.2.1 | Tomato | nucleus | 52.16 | 51.69 |
| KRH74145 | Soybean | nucleus | 52.07 | 51.27 |
| KRH60117 | Soybean | nucleus | 48.85 | 48.32 |
| KRH41404 | Soybean | nucleus | 49.03 | 47.89 |
| TraesCS7A01G160800.1 | Wheat | nucleus | 42.78 | 43.62 |
| TraesCS7A01G461700.1 | Wheat | nucleus | 35.51 | 42.46 |
| TraesCS2A01G547800.1 | Wheat | nucleus | 31.83 | 41.64 |
| TraesCS6A01G138600.4 | Wheat | nucleus | 34.87 | 40.84 |
| TraesCS5A01G038300.2 | Wheat | nucleus | 32.75 | 39.6 |
| TraesCS2A01G309300.1 | Wheat | nucleus | 21.62 | 35.93 |
| TraesCS2A01G491000.1 | Wheat | nucleus | 31.0 | 35.29 |
| TraesCS3A01G442000.1 | Wheat | nucleus | 23.83 | 32.5 |
| TraesCS3A01G449300.3 | Wheat | nucleus | 22.91 | 30.04 |
| TraesCS3A01G159200.1 | Wheat | nucleus | 20.15 | 28.85 |
Protein Annotations
| MapMan:15.5.5.1 | Gene3D:2.30.30.1040 | Gene3D:2.40.330.10 | Gene3D:3.10.20.90 | InterPro:AUX/IAA_dom | InterPro:Auxin_resp |
| InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009725 |
| GO:GO:0009987 | InterPro:IPR000270 | InterPro:IPR003340 | InterPro:IPR015300 | InterPro:PB1_dom | PFAM:PF02309 |
| PFAM:PF02362 | PFAM:PF06507 | PFscan:PS50863 | PFscan:PS51745 | PANTHER:PTHR31384 | PANTHER:PTHR31384:SF18 |
| SMART:SM01019 | SUPFAM:SSF101936 | SUPFAM:SSF54277 | EnsemblPlantsGene:TraesCS7A01G252000 | EnsemblPlants:TraesCS7A01G252000.2 | TIGR:cd10017 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr7A:+:236612094..236620292
Molecular Weight (calculated)
120579.0 Da
IEP (calculated)
6.511
GRAVY (calculated)
-0.487
Length
1087 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAPEGSGAG GGEGARGSRV NQELWYACAG PLVALPPPGS LVVYFPQGHS EQVAASMRKD ADAQIPSYPN LPSKLICILH SVTMESDPDT DEVYARMTLQ
0101: PVSNVTQCDK EILLASELAL KQNKPQTEFF CKTLTASDTS THGGFSVPRR AAERIFPRLD FSLQPPAQEL QARDLHDTIW TFRHIFRGQP KRHLLTTGWS
0201: LFISGKRLLA GDSVLFIRDA KQQLLLGIRR ANRQPTNLSS SVLSSDSMHI GVLAAAAHAA ANNSQFTIFY NPRASPSEFV IPFAKYQKAV YGNQLSLGMR
0301: FRMMFETEES GTRRYMGTIT GISDLDPVRW KNSQWRNIQV AWDEAAPSER RTRVSLWDIE PVIAPFFIYP TPLFTAKRAR EPGMIDDDSS GMDNLFKRTM
0401: PWLGEEICKK DMNTQNSIVP GLNLAQSLQW MNMQQNLSLA GTVMQPELLN SLAGKHVQNL SAADISRQIS FQPQFLQQNN IQFNTSLLPQ QNQQAEQLAK
0501: AIATPNQLGN IMVLQKVDQN CNSGQKQHTV TQSVQGSQAN LNVTQPEHVA QAQFQQPRVI LQAQLQQQQP LVQSHTVFQG GLQQIQVLQQ QQPHLQQQPQ
0601: HHQQVQHSVQ EQQQMKIQPV HVSSDANMNT QLSDHQMKLQ LLKALHSQQH LTMEQQKMLF DLQQQVVNSQ SDPQQCVQGA TQTVGFHNSN TIQYAAQQKA
0701: QSHQPIEDSP RGTIPVAKSD IVTSMGASSL NVAGRMQSVR TDNVPSSSTS PSTTTNHVLL QSIPSSSKNQ SLPTAAKTSQ SSVVLGPTIE QEMKSYQSVK
0801: PTIMIPKMIE QGPATERDYI TNPHMDYLDT SSSATSVCLS QADGSLQQNF PSSSFDQHQL LRDTAPDSEF EISDPTNNLL FGVNIDGQLG LPLNADALLA
0901: NSIENDKFMD EMAGNGISNY ISSKDSQQEL SSSMISHSLG VADMGFNSID SAINDPPFLN RNSRAPAPAH QRMRTYTKVH KRGAVGRSID MNRYSGYDEL
1001: KHDIARMFGI EGQLGDQSRV GWKLVYEDHE KDVLLVGDDP WEDFLNCVRC IRILSPQEEM QMRLVGDFGD GFLPNQACSS SDGGQPW
0101: PVSNVTQCDK EILLASELAL KQNKPQTEFF CKTLTASDTS THGGFSVPRR AAERIFPRLD FSLQPPAQEL QARDLHDTIW TFRHIFRGQP KRHLLTTGWS
0201: LFISGKRLLA GDSVLFIRDA KQQLLLGIRR ANRQPTNLSS SVLSSDSMHI GVLAAAAHAA ANNSQFTIFY NPRASPSEFV IPFAKYQKAV YGNQLSLGMR
0301: FRMMFETEES GTRRYMGTIT GISDLDPVRW KNSQWRNIQV AWDEAAPSER RTRVSLWDIE PVIAPFFIYP TPLFTAKRAR EPGMIDDDSS GMDNLFKRTM
0401: PWLGEEICKK DMNTQNSIVP GLNLAQSLQW MNMQQNLSLA GTVMQPELLN SLAGKHVQNL SAADISRQIS FQPQFLQQNN IQFNTSLLPQ QNQQAEQLAK
0501: AIATPNQLGN IMVLQKVDQN CNSGQKQHTV TQSVQGSQAN LNVTQPEHVA QAQFQQPRVI LQAQLQQQQP LVQSHTVFQG GLQQIQVLQQ QQPHLQQQPQ
0601: HHQQVQHSVQ EQQQMKIQPV HVSSDANMNT QLSDHQMKLQ LLKALHSQQH LTMEQQKMLF DLQQQVVNSQ SDPQQCVQGA TQTVGFHNSN TIQYAAQQKA
0701: QSHQPIEDSP RGTIPVAKSD IVTSMGASSL NVAGRMQSVR TDNVPSSSTS PSTTTNHVLL QSIPSSSKNQ SLPTAAKTSQ SSVVLGPTIE QEMKSYQSVK
0801: PTIMIPKMIE QGPATERDYI TNPHMDYLDT SSSATSVCLS QADGSLQQNF PSSSFDQHQL LRDTAPDSEF EISDPTNNLL FGVNIDGQLG LPLNADALLA
0901: NSIENDKFMD EMAGNGISNY ISSKDSQQEL SSSMISHSLG VADMGFNSID SAINDPPFLN RNSRAPAPAH QRMRTYTKVH KRGAVGRSID MNRYSGYDEL
1001: KHDIARMFGI EGQLGDQSRV GWKLVYEDHE KDVLLVGDDP WEDFLNCVRC IRILSPQEEM QMRLVGDFGD GFLPNQACSS SDGGQPW
0001: MKAPSNGFLP SSNEGEKKPI NSQLWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMQKQ TDFIPNYPNL PSKLICLLHS VTLHADTETD EVYAQMTLQP
0101: VNKYDREALL ASDMGLKLNR QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIVAKD LHDTTWTFRH IYRGQPKRHL LTTGWSVFVS
0201: TKRLFAGDSV LFVRDEKSQL MLGIRRANRQ TPTLSSSVIS SDSMHIGILA AAAHANANSS PFTIFFNPRA SPSEFVVPLA KYNKALYAQV SLGMRFRMMF
0301: ETEDCGVRRY MGTVTGISDL DPVRWKGSQW RNLQVGWDES TAGDRPSRVS IWEIEPVITP FYICPPPFFR PKYPRQPGMP DDELDMENAF KRAMPWMGED
0401: FGMKDAQSSM FPGLSLVQWM SMQQNNPLSG SATPQLPSAL SSFNLPNNFA SNDPSKLLNF QSPNLSSANS QFNKPNTVNH ISQQMQAQPA MVKSQQQQQQ
0501: QQQQHQHQQQ QLQQQQQLQM SQQQVQQQGI YNNGTIAVAN QVSCQSPNQP TGFSQSQLQQ QSMLPTGAKM THQNINSMGN KGLSQMTSFA QEMQFQQQLE
0601: MHNSSQLLRN QQEQSSLHSL QQNLSQNPQQ LQMQQQSSKP SPSQQLQLQL LQKLQQQQQQ QSIPPVSSSL QPQLSALQQT QSHQLQQLLS SQNQQPLAHG
0701: NNSFPASTFM QPPQIQVSPQ QQGQMSNKNL VAAGRSHSGH TDGEAPSCST SPSANNTGHD NVSPTNFLSR NQQQGQAASV SASDSVFERA SNPVQELYTK
0801: TESRISQGMM NMKSAGEHFR FKSAVTDQID VSTAGTTYCP DVVGPVQQQQ TFPLPSFGFD GDCQSHHPRN NLAFPGNLEA VTSDPLYSQK DFQNLVPNYG
0901: NTPRDIETEL SSAAISSQSF GIPSIPFKPG CSNEVGGIND SGIMNGGGLW PNQTQRMRTY TKVQKRGSVG RSIDVTRYSG YDELRHDLAR MFGIEGQLED
1001: PLTSDWKLVY TDHENDILLV GDDPWEEFVN CVQNIKILSS VEVQQMSLDG DLAAIPTTNQ ACSETDSGNA WKVHYEDTSA AASFNR
0101: VNKYDREALL ASDMGLKLNR QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIVAKD LHDTTWTFRH IYRGQPKRHL LTTGWSVFVS
0201: TKRLFAGDSV LFVRDEKSQL MLGIRRANRQ TPTLSSSVIS SDSMHIGILA AAAHANANSS PFTIFFNPRA SPSEFVVPLA KYNKALYAQV SLGMRFRMMF
0301: ETEDCGVRRY MGTVTGISDL DPVRWKGSQW RNLQVGWDES TAGDRPSRVS IWEIEPVITP FYICPPPFFR PKYPRQPGMP DDELDMENAF KRAMPWMGED
0401: FGMKDAQSSM FPGLSLVQWM SMQQNNPLSG SATPQLPSAL SSFNLPNNFA SNDPSKLLNF QSPNLSSANS QFNKPNTVNH ISQQMQAQPA MVKSQQQQQQ
0501: QQQQHQHQQQ QLQQQQQLQM SQQQVQQQGI YNNGTIAVAN QVSCQSPNQP TGFSQSQLQQ QSMLPTGAKM THQNINSMGN KGLSQMTSFA QEMQFQQQLE
0601: MHNSSQLLRN QQEQSSLHSL QQNLSQNPQQ LQMQQQSSKP SPSQQLQLQL LQKLQQQQQQ QSIPPVSSSL QPQLSALQQT QSHQLQQLLS SQNQQPLAHG
0701: NNSFPASTFM QPPQIQVSPQ QQGQMSNKNL VAAGRSHSGH TDGEAPSCST SPSANNTGHD NVSPTNFLSR NQQQGQAASV SASDSVFERA SNPVQELYTK
0801: TESRISQGMM NMKSAGEHFR FKSAVTDQID VSTAGTTYCP DVVGPVQQQQ TFPLPSFGFD GDCQSHHPRN NLAFPGNLEA VTSDPLYSQK DFQNLVPNYG
0901: NTPRDIETEL SSAAISSQSF GIPSIPFKPG CSNEVGGIND SGIMNGGGLW PNQTQRMRTY TKVQKRGSVG RSIDVTRYSG YDELRHDLAR MFGIEGQLED
1001: PLTSDWKLVY TDHENDILLV GDDPWEEFVN CVQNIKILSS VEVQQMSLDG DLAAIPTTNQ ACSETDSGNA WKVHYEDTSA AASFNR
Arabidopsis Description
ARF19Auxin response factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q8RYC8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.