Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G252000.2 | Wheat | nucleus | 97.89 | 98.34 |
| TraesCS7B01G138900.6 | Wheat | nucleus | 98.26 | 98.08 |
| HORVU7Hr1G051930.4 | Barley | nucleus | 95.24 | 96.03 |
| Os08t0520550-01 | Rice | nucleus | 47.89 | 82.1 |
| Os08t0520500-01 | Rice | cytosol | 3.75 | 82.0 |
| EES15359 | Sorghum | nucleus | 77.66 | 77.44 |
| Zm00001d031522_P007 | Maize | nucleus | 76.37 | 76.8 |
| VIT_11s0065g00310.t01 | Wine grape | nucleus | 56.96 | 55.78 |
| TraesCS6D01G102300.1 | Wheat | nucleus | 55.95 | 54.12 |
| Solyc07g016180.2.1 | Tomato | nucleus | 54.95 | 53.96 |
| GSMUA_Achr6P01740_001 | Banana | nucleus | 51.19 | 53.8 |
| PGSC0003DMT400025312 | Potato | nucleus | 54.67 | 53.59 |
| TraesCS7D01G409700.1 | Wheat | nucleus | 56.96 | 52.94 |
| KRH49070 | Soybean | nucleus | 53.48 | 52.61 |
| PGSC0003DMT400035592 | Potato | nucleus | 52.47 | 52.23 |
| Solyc05g047460.2.1 | Tomato | nucleus | 52.29 | 52.05 |
| KRH74145 | Soybean | nucleus | 51.92 | 51.36 |
| KRH60117 | Soybean | nucleus | 48.72 | 48.41 |
| KRH41404 | Soybean | nucleus | 48.72 | 47.8 |
| TraesCS7D01G161900.1 | Wheat | nucleus | 42.4 | 43.47 |
| TraesCS7D01G449900.2 | Wheat | nucleus | 35.35 | 42.51 |
| TraesCS2D01G548900.1 | Wheat | nucleus | 31.96 | 41.9 |
| TraesCS6D01G127600.2 | Wheat | nucleus | 34.62 | 40.78 |
| TraesCS5D01G045700.2 | Wheat | nucleus | 32.6 | 39.56 |
| TraesCS2D01G307600.1 | Wheat | nucleus | 21.34 | 35.63 |
| TraesCS2D01G491200.2 | Wheat | nucleus | 30.95 | 35.39 |
| TraesCS3D01G434700.1 | Wheat | nucleus | 23.63 | 32.41 |
| TraesCS3D01G166700.1 | Wheat | nucleus | 20.15 | 29.02 |
| TraesCS3D01G442000.7 | Wheat | nucleus | 22.89 | 28.22 |
Protein Annotations
| MapMan:15.5.5.1 | Gene3D:2.30.30.1040 | Gene3D:2.40.330.10 | Gene3D:3.10.20.90 | InterPro:AUX/IAA_dom | InterPro:Auxin_resp |
| InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009725 |
| GO:GO:0009987 | InterPro:IPR000270 | InterPro:IPR003340 | InterPro:IPR015300 | InterPro:PB1_dom | PFAM:PF02309 |
| PFAM:PF02362 | PFAM:PF06507 | PFscan:PS50863 | PFscan:PS51745 | PANTHER:PTHR31384 | PANTHER:PTHR31384:SF18 |
| SMART:SM01019 | SUPFAM:SSF101936 | SUPFAM:SSF54277 | EnsemblPlantsGene:TraesCS7D01G250100 | EnsemblPlants:TraesCS7D01G250100.4 | TIGR:cd10017 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr7D:+:222138867..222145006
Molecular Weight (calculated)
121213.0 Da
IEP (calculated)
6.455
GRAVY (calculated)
-0.503
Length
1092 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAPEGSGAG GGEGARGSRV NQELWYACAG PLVALPPPGS LVVYFPQGHS EQVAASMRKD ADAQIPSYPN LPSKLICILH SVTMQSDPDT DEVYARMTLQ
0101: PVSNVSQCDK EILLASELAL KQNKPQTEFF CKTLTASDTS THGGFSVPRR AAERIFPRLD FSLQPPAQEL QARDLHDTIW TFRHIFRGQP KRHLLTTGWS
0201: LFISGKRLLA GDSVLFIRDA KQQLLLGIRR ANRQPTNLSS SVLSSDSMHI GVLAAAAHAA ANNSQFTIFY NPRASPSEFV IPFAKYQKAV YGNQLSLGMR
0301: FRMMFETEES GTRRYMGTIT GISDLDPVRW KNSQWRNIQV AWDEAAPSER RTRVSLWDIE PVIAPFFIYP TPLFTAKRAR QPGMIDDDTS GMDNLFKRTM
0401: PWLGEEICKK DMNTQNSIVP GLNIAQSLQW MNMQQNLSLA GTVMQPELLN SLAGKHVQNL SAADISRQIS FQPQFLQQNN IQFNTSLLPQ QNQQAEQLAK
0501: AIATPNQLGN IMVPQKVDQD CNSDQKQHTV TQSVQGSQAN LNVTQPEHVV QAQFQQPRVI LQAQLQQQQP LVQSHTVFQG GLQQIQVLQQ QQPHLQQQLQ
0601: QQQPQHHQQV QHSVQEQQQM KIQPVHVSSD ANMNTQLSDH QMKLQLLKAL HSQQHLTMEQ QKMLFDLQQQ VVNSQSDPQQ CVQGATQTVG FHNSNTIQYA
0701: TQQKAQSHQP IEDSPRGTIP VAKSDIVTSM GASSLNGTGR MQSVRTDNVP SSSTSPSTTT NHVLLQSIPS SSKNQSLPTA AKTSQSSVVL GPTIEQEMKS
0801: YQSVKPTIMV PKMIEQGPAT ERDYINNPHM DYLDTSSSAT SVCLSQADGS LQQNFPSSSF DQHQLLRDTA PDSEFEISDP TNNVLFGVNI DGQLGLPLNA
0901: DALIANSIEN DKFMDEMAGN GISNYISSKD SQQELSSSMI SHSLGVADMG FNSIDSAIND PSFLNRNSRA PAPAHQCMRT YTKVHKRGAV GRSIDMNRYS
1001: GYDELKHDIA RMFGIEGQLG DQSRVGWKLV YEDHEKDVLL VGDDPWEDFL NCVRCIRILS PQEEMQMRLV GDFGDGFLPN QACSSSDGGQ PW
0101: PVSNVSQCDK EILLASELAL KQNKPQTEFF CKTLTASDTS THGGFSVPRR AAERIFPRLD FSLQPPAQEL QARDLHDTIW TFRHIFRGQP KRHLLTTGWS
0201: LFISGKRLLA GDSVLFIRDA KQQLLLGIRR ANRQPTNLSS SVLSSDSMHI GVLAAAAHAA ANNSQFTIFY NPRASPSEFV IPFAKYQKAV YGNQLSLGMR
0301: FRMMFETEES GTRRYMGTIT GISDLDPVRW KNSQWRNIQV AWDEAAPSER RTRVSLWDIE PVIAPFFIYP TPLFTAKRAR QPGMIDDDTS GMDNLFKRTM
0401: PWLGEEICKK DMNTQNSIVP GLNIAQSLQW MNMQQNLSLA GTVMQPELLN SLAGKHVQNL SAADISRQIS FQPQFLQQNN IQFNTSLLPQ QNQQAEQLAK
0501: AIATPNQLGN IMVPQKVDQD CNSDQKQHTV TQSVQGSQAN LNVTQPEHVV QAQFQQPRVI LQAQLQQQQP LVQSHTVFQG GLQQIQVLQQ QQPHLQQQLQ
0601: QQQPQHHQQV QHSVQEQQQM KIQPVHVSSD ANMNTQLSDH QMKLQLLKAL HSQQHLTMEQ QKMLFDLQQQ VVNSQSDPQQ CVQGATQTVG FHNSNTIQYA
0701: TQQKAQSHQP IEDSPRGTIP VAKSDIVTSM GASSLNGTGR MQSVRTDNVP SSSTSPSTTT NHVLLQSIPS SSKNQSLPTA AKTSQSSVVL GPTIEQEMKS
0801: YQSVKPTIMV PKMIEQGPAT ERDYINNPHM DYLDTSSSAT SVCLSQADGS LQQNFPSSSF DQHQLLRDTA PDSEFEISDP TNNVLFGVNI DGQLGLPLNA
0901: DALIANSIEN DKFMDEMAGN GISNYISSKD SQQELSSSMI SHSLGVADMG FNSIDSAIND PSFLNRNSRA PAPAHQCMRT YTKVHKRGAV GRSIDMNRYS
1001: GYDELKHDIA RMFGIEGQLG DQSRVGWKLV YEDHEKDVLL VGDDPWEDFL NCVRCIRILS PQEEMQMRLV GDFGDGFLPN QACSSSDGGQ PW
0001: MKAPSNGFLP SSNEGEKKPI NSQLWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMQKQ TDFIPNYPNL PSKLICLLHS VTLHADTETD EVYAQMTLQP
0101: VNKYDREALL ASDMGLKLNR QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIVAKD LHDTTWTFRH IYRGQPKRHL LTTGWSVFVS
0201: TKRLFAGDSV LFVRDEKSQL MLGIRRANRQ TPTLSSSVIS SDSMHIGILA AAAHANANSS PFTIFFNPRA SPSEFVVPLA KYNKALYAQV SLGMRFRMMF
0301: ETEDCGVRRY MGTVTGISDL DPVRWKGSQW RNLQVGWDES TAGDRPSRVS IWEIEPVITP FYICPPPFFR PKYPRQPGMP DDELDMENAF KRAMPWMGED
0401: FGMKDAQSSM FPGLSLVQWM SMQQNNPLSG SATPQLPSAL SSFNLPNNFA SNDPSKLLNF QSPNLSSANS QFNKPNTVNH ISQQMQAQPA MVKSQQQQQQ
0501: QQQQHQHQQQ QLQQQQQLQM SQQQVQQQGI YNNGTIAVAN QVSCQSPNQP TGFSQSQLQQ QSMLPTGAKM THQNINSMGN KGLSQMTSFA QEMQFQQQLE
0601: MHNSSQLLRN QQEQSSLHSL QQNLSQNPQQ LQMQQQSSKP SPSQQLQLQL LQKLQQQQQQ QSIPPVSSSL QPQLSALQQT QSHQLQQLLS SQNQQPLAHG
0701: NNSFPASTFM QPPQIQVSPQ QQGQMSNKNL VAAGRSHSGH TDGEAPSCST SPSANNTGHD NVSPTNFLSR NQQQGQAASV SASDSVFERA SNPVQELYTK
0801: TESRISQGMM NMKSAGEHFR FKSAVTDQID VSTAGTTYCP DVVGPVQQQQ TFPLPSFGFD GDCQSHHPRN NLAFPGNLEA VTSDPLYSQK DFQNLVPNYG
0901: NTPRDIETEL SSAAISSQSF GIPSIPFKPG CSNEVGGIND SGIMNGGGLW PNQTQRMRTY TKVQKRGSVG RSIDVTRYSG YDELRHDLAR MFGIEGQLED
1001: PLTSDWKLVY TDHENDILLV GDDPWEEFVN CVQNIKILSS VEVQQMSLDG DLAAIPTTNQ ACSETDSGNA WKVHYEDTSA AASFNR
0101: VNKYDREALL ASDMGLKLNR QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIVAKD LHDTTWTFRH IYRGQPKRHL LTTGWSVFVS
0201: TKRLFAGDSV LFVRDEKSQL MLGIRRANRQ TPTLSSSVIS SDSMHIGILA AAAHANANSS PFTIFFNPRA SPSEFVVPLA KYNKALYAQV SLGMRFRMMF
0301: ETEDCGVRRY MGTVTGISDL DPVRWKGSQW RNLQVGWDES TAGDRPSRVS IWEIEPVITP FYICPPPFFR PKYPRQPGMP DDELDMENAF KRAMPWMGED
0401: FGMKDAQSSM FPGLSLVQWM SMQQNNPLSG SATPQLPSAL SSFNLPNNFA SNDPSKLLNF QSPNLSSANS QFNKPNTVNH ISQQMQAQPA MVKSQQQQQQ
0501: QQQQHQHQQQ QLQQQQQLQM SQQQVQQQGI YNNGTIAVAN QVSCQSPNQP TGFSQSQLQQ QSMLPTGAKM THQNINSMGN KGLSQMTSFA QEMQFQQQLE
0601: MHNSSQLLRN QQEQSSLHSL QQNLSQNPQQ LQMQQQSSKP SPSQQLQLQL LQKLQQQQQQ QSIPPVSSSL QPQLSALQQT QSHQLQQLLS SQNQQPLAHG
0701: NNSFPASTFM QPPQIQVSPQ QQGQMSNKNL VAAGRSHSGH TDGEAPSCST SPSANNTGHD NVSPTNFLSR NQQQGQAASV SASDSVFERA SNPVQELYTK
0801: TESRISQGMM NMKSAGEHFR FKSAVTDQID VSTAGTTYCP DVVGPVQQQQ TFPLPSFGFD GDCQSHHPRN NLAFPGNLEA VTSDPLYSQK DFQNLVPNYG
0901: NTPRDIETEL SSAAISSQSF GIPSIPFKPG CSNEVGGIND SGIMNGGGLW PNQTQRMRTY TKVQKRGSVG RSIDVTRYSG YDELRHDLAR MFGIEGQLED
1001: PLTSDWKLVY TDHENDILLV GDDPWEEFVN CVQNIKILSS VEVQQMSLDG DLAAIPTTNQ ACSETDSGNA WKVHYEDTSA AASFNR
Arabidopsis Description
ARF19Auxin response factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q8RYC8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.