Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES15359 | Sorghum | nucleus | 82.89 | 48.22 |
| TraesCS7D01G250100.4 | Wheat | nucleus | 82.1 | 47.89 |
| TraesCS7B01G138900.6 | Wheat | nucleus | 82.1 | 47.81 |
| TraesCS7A01G252000.2 | Wheat | nucleus | 81.32 | 47.65 |
| HORVU7Hr1G051930.4 | Barley | nucleus | 80.22 | 47.18 |
| Zm00001d031522_P007 | Maize | nucleus | 80.22 | 47.05 |
| Os11t0523800-01 | Rice | nucleus | 26.84 | 46.72 |
| Os06t0702600-01 | Rice | nucleus | 65.78 | 42.28 |
| Os02t0141100-00 | Rice | nucleus | 62.95 | 35.93 |
| VIT_11s0065g00310.t01 | Wine grape | nucleus | 62.48 | 35.7 |
| GSMUA_Achr6P01740_001 | Banana | nucleus | 56.04 | 34.36 |
| Solyc07g016180.2.1 | Tomato | nucleus | 59.65 | 34.17 |
| PGSC0003DMT400025312 | Potato | nucleus | 59.5 | 34.02 |
| PGSC0003DMT400035592 | Potato | nucleus | 58.24 | 33.82 |
| Solyc05g047460.2.1 | Tomato | nucleus | 58.08 | 33.73 |
| KRH49070 | Soybean | nucleus | 57.77 | 33.15 |
| Os04t0671900-01 | Rice | nucleus | 42.07 | 32.76 |
| KRH74145 | Soybean | nucleus | 56.2 | 32.43 |
| Os02t0164900-01 | Rice | nucleus | 45.37 | 31.83 |
| Os06t0677800-01 | Rice | nucleus | 45.53 | 31.62 |
| Os12t0613700-01 | Rice | nucleus | 44.43 | 31.48 |
| Os06t0196700-02 | Rice | nucleus | 51.65 | 31.18 |
| KRH60117 | Soybean | nucleus | 53.06 | 30.76 |
| KRH41404 | Soybean | nucleus | 52.75 | 30.19 |
| Os04t0664400-01 | Rice | nucleus | 41.76 | 28.91 |
| Os04t0442000-01 | Rice | nucleus | 29.2 | 27.64 |
| Os02t0557200-01 | Rice | nucleus | 29.2 | 27.43 |
| Os01t0927600-01 | Rice | nucleus | 31.08 | 24.5 |
| Os01t0236300-01 | Rice | nucleus | 26.22 | 23.89 |
| Os12t0479400-02 | Rice | nucleus | 30.3 | 22.95 |
| Os08t0520500-01 | Rice | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:15.5.5.1 | Gene3D:2.30.30.1040 | Gene3D:2.40.330.10 | UniProt:A0A0P0XIX0 | InterPro:Auxin_resp | InterPro:B3_DNA-bd |
| ProteinID:BAT06294.1 | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009719 | GO:GO:0009725 | GO:GO:0009734 | GO:GO:0009987 | InterPro:IPR003340 | InterPro:IPR015300 |
| EnsemblPlantsGene:Os08g0520550 | EnsemblPlants:Os08t0520550-01 | PFAM:PF02362 | PFAM:PF06507 | PFscan:PS50863 | PANTHER:PTHR31384 |
| PANTHER:PTHR31384:SF18 | SMART:SM01019 | SUPFAM:SSF101936 | UniParc:UPI0003938FC4 | SEG:seg | : |
Description
Similar to Auxin response factor 21. (Os08t0520550-01)
Coordinates
chr8:-:25873389..25877678
Molecular Weight (calculated)
71167.9 Da
IEP (calculated)
8.175
GRAVY (calculated)
-0.433
Length
637 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSGGGGGG GEEGEGRGAT KVNQELWYAC AGPLVSLPPQ GSLIVYFPQG HSEQVAASMR KDADAQIPSY PNLPSKLICI LHSVTMLADP DTDEVYARMT
101: LQPVSNVTQC DKETLLASEL ALKQTRPQTE FFCKTLTASD TSTHGGFSVP RRAAERIFPR LDFSMQPPAQ ELQARDLHDN VWTFRHIYRG QPKRHLLTTG
201: WSLFVSGKRL LAGDSVLFIR DAKQQLLLGI RRANRQPTNL SSSVLSSDSM HIGILAAAAH AAANNSQFTI YYNPRASTSE FVIPFAKYQK AVYGNQLSLG
301: MRFRMMFETE ESGTRRYMGT ITGISDLDPV RWKTSHWRNI QVAWDEAAPT ERRTRVSLWE IEPIIAPFFI YPSPLFTAKR PRLPGMTDDE TEMDGLLKRA
401: MPWVGEEICK KDLNIQNSVV PGLNLAQWMN MQHSSSLPGT VVQPELLNSL SGKPVQNLAA ADLSRQISFH PQFLQQNNIQ FNTALVPQQN QQTEQLAKVI
501: PTPNQLGSVI IPQKVVQDCN SEQRQHVVTQ PVQGSQPNIN IPQPQLVVQA QLQQPQVILQ AQLQQPQVVV QAQLQQTQPS VQSHTVLQGG LQQIQLLQQQ
601: QPHVQHQQIP QQLHHQQQQT QQLQPVQQVQ QSVQEHQ
101: LQPVSNVTQC DKETLLASEL ALKQTRPQTE FFCKTLTASD TSTHGGFSVP RRAAERIFPR LDFSMQPPAQ ELQARDLHDN VWTFRHIYRG QPKRHLLTTG
201: WSLFVSGKRL LAGDSVLFIR DAKQQLLLGI RRANRQPTNL SSSVLSSDSM HIGILAAAAH AAANNSQFTI YYNPRASTSE FVIPFAKYQK AVYGNQLSLG
301: MRFRMMFETE ESGTRRYMGT ITGISDLDPV RWKTSHWRNI QVAWDEAAPT ERRTRVSLWE IEPIIAPFFI YPSPLFTAKR PRLPGMTDDE TEMDGLLKRA
401: MPWVGEEICK KDLNIQNSVV PGLNLAQWMN MQHSSSLPGT VVQPELLNSL SGKPVQNLAA ADLSRQISFH PQFLQQNNIQ FNTALVPQQN QQTEQLAKVI
501: PTPNQLGSVI IPQKVVQDCN SEQRQHVVTQ PVQGSQPNIN IPQPQLVVQA QLQQPQVILQ AQLQQPQVVV QAQLQQTQPS VQSHTVLQGG LQQIQLLQQQ
601: QPHVQHQQIP QQLHHQQQQT QQLQPVQQVQ QSVQEHQ
0001: MKAPSSNGVS PNPVEGERRN INSELWHACA GPLISLPPAG SLVVYFPQGH SEQVAASMQK QTDFIPSYPN LPSKLICMLH NVTLNADPET DEVYAQMTLQ
0101: PVNKYDRDAL LASDMGLKLN RQPNEFFCKT LTASDTSTHG GFSVPRRAAE KIFPALDFSM QPPCQELVAK DIHDNTWTFR HIYRGQPKRH LLTTGWSVFV
0201: STKRLFAGDS VLFIRDGKAQ LLLGIRRANR QQPALSSSVI SSDSMHIGVL AAAAHANANN SPFTIFYNPR AAPAEFVVPL AKYTKAMYAQ VSLGMRFRMI
0301: FETEECGVRR YMGTVTGISD LDPVRWKNSQ WRNLQIGWDE SAAGDRPSRV SVWDIEPVLT PFYICPPPFF RPRFSGQPGM PDDETDMESA LKRAMPWLDN
0401: SLEMKDPSST IFPGLSLVQW MNMQQQNGQL PSAAAQPGFF PSMLSPTAAL HNNLGGTDDP SKLLSFQTPH GGISSSNLQF NKQNQQAPMS QLPQPPTTLS
0501: QQQQLQQLLH SSLNHQQQQS QSQQQQQQQQ LLQQQQQLQS QQHSNNNQSQ SQQQQQLLQQ QQQQQLQQQH QQPLQQQTQQ QQLRTQPLQS HSHPQPQQLQ
0601: QHKLQQLQVP QNQLYNGQQA AQQHQSQQAS THHLQPQLVS GSMASSVITP PSSSLNQSFQ QQQQQSKQLQ QAHHHLGAST SQSSVIETSK SSSNLMSAPP
0701: QETQFSRQVE QQQPPGLNGQ NQQTLLQQKA HQAQAQQIFQ QSLLEQPHIQ FQLLQRLQQQ QQQQFLSPQS QLPHHQLQSQ QLQQLPTLSQ GHQFPSSCTN
0801: NGLSTLQPPQ MLVSRPQEKQ NPPVGGGVKA YSGITDGGDA PSSSTSPSTN NCQISSSGFL NRSQSGPAIL IPDAAIDMSG NLVQDLYSKS DMRLKQELVG
0901: QQKSKASLTD HQLEASASGT SYGLDGGENN RQQNFLAPTF GLDGDSRNSL LGGANVDNGF VPDTLLSRGY DSQKDLQNML SNYGGVTNDI GTEMSTSAVR
1001: TQSFGVPNVP AISNDLAVND AGVLGGGLWP AQTQRMRTYT KVQKRGSVGR SIDVNRYRGY DELRHDLARM FGIEGQLEDP QTSDWKLVYV DHENDILLVG
1101: DDPWEEFVNC VQSIKILSSA EVQQMSLDGN FAGVPVTNQA CSGGDSGNAW RGHYDDNSAT SFNR
0101: PVNKYDRDAL LASDMGLKLN RQPNEFFCKT LTASDTSTHG GFSVPRRAAE KIFPALDFSM QPPCQELVAK DIHDNTWTFR HIYRGQPKRH LLTTGWSVFV
0201: STKRLFAGDS VLFIRDGKAQ LLLGIRRANR QQPALSSSVI SSDSMHIGVL AAAAHANANN SPFTIFYNPR AAPAEFVVPL AKYTKAMYAQ VSLGMRFRMI
0301: FETEECGVRR YMGTVTGISD LDPVRWKNSQ WRNLQIGWDE SAAGDRPSRV SVWDIEPVLT PFYICPPPFF RPRFSGQPGM PDDETDMESA LKRAMPWLDN
0401: SLEMKDPSST IFPGLSLVQW MNMQQQNGQL PSAAAQPGFF PSMLSPTAAL HNNLGGTDDP SKLLSFQTPH GGISSSNLQF NKQNQQAPMS QLPQPPTTLS
0501: QQQQLQQLLH SSLNHQQQQS QSQQQQQQQQ LLQQQQQLQS QQHSNNNQSQ SQQQQQLLQQ QQQQQLQQQH QQPLQQQTQQ QQLRTQPLQS HSHPQPQQLQ
0601: QHKLQQLQVP QNQLYNGQQA AQQHQSQQAS THHLQPQLVS GSMASSVITP PSSSLNQSFQ QQQQQSKQLQ QAHHHLGAST SQSSVIETSK SSSNLMSAPP
0701: QETQFSRQVE QQQPPGLNGQ NQQTLLQQKA HQAQAQQIFQ QSLLEQPHIQ FQLLQRLQQQ QQQQFLSPQS QLPHHQLQSQ QLQQLPTLSQ GHQFPSSCTN
0801: NGLSTLQPPQ MLVSRPQEKQ NPPVGGGVKA YSGITDGGDA PSSSTSPSTN NCQISSSGFL NRSQSGPAIL IPDAAIDMSG NLVQDLYSKS DMRLKQELVG
0901: QQKSKASLTD HQLEASASGT SYGLDGGENN RQQNFLAPTF GLDGDSRNSL LGGANVDNGF VPDTLLSRGY DSQKDLQNML SNYGGVTNDI GTEMSTSAVR
1001: TQSFGVPNVP AISNDLAVND AGVLGGGLWP AQTQRMRTYT KVQKRGSVGR SIDVNRYRGY DELRHDLARM FGIEGQLEDP QTSDWKLVYV DHENDILLVG
1101: DDPWEEFVNC VQSIKILSSA EVQQMSLDGN FAGVPVTNQA CSGGDSGNAW RGHYDDNSAT SFNR
Arabidopsis Description
NPH4Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related [Source:TAIR;Acc:AT5G20730]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.