Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G141300.2 | Wheat | nucleus | 80.82 | 79.75 |
| TraesCS6D01G102300.1 | Wheat | nucleus | 80.65 | 79.72 |
| TraesCS6A01G113000.1 | Wheat | nucleus | 80.91 | 79.56 |
| OQU84350 | Sorghum | nucleus | 75.72 | 78.97 |
| HORVU6Hr1G020330.30 | Barley | nucleus | 80.73 | 78.97 |
| Os06t0702600-01 | Rice | nucleus | 67.29 | 75.78 |
| Zm00001d015243_P001 | Maize | nucleus | 72.85 | 74.45 |
| GSMUA_Achr3P05460_001 | Banana | nucleus | 59.68 | 68.45 |
| Os08t0520500-01 | Rice | cytosol | 3.05 | 68.0 |
| GSMUA_Achr9P14090_001 | Banana | nucleus | 55.2 | 67.69 |
| GSMUA_Achr5P05010_001 | Banana | nucleus | 50.18 | 64.29 |
| Os08t0520550-01 | Rice | nucleus | 35.93 | 62.95 |
| GSMUA_Achr8P23850_001 | Banana | nucleus | 59.32 | 62.04 |
| VIT_11s0065g00310.t01 | Wine grape | nucleus | 57.62 | 57.67 |
| Solyc07g016180.2.1 | Tomato | nucleus | 55.65 | 55.85 |
| PGSC0003DMT400025312 | Potato | nucleus | 55.29 | 55.39 |
| KRH49070 | Soybean | nucleus | 53.23 | 53.51 |
| Solyc05g047460.2.1 | Tomato | nucleus | 52.33 | 53.24 |
| PGSC0003DMT400035592 | Potato | nucleus | 52.33 | 53.24 |
| KRH74145 | Soybean | nucleus | 52.51 | 53.08 |
| KRH60117 | Soybean | nucleus | 49.46 | 50.23 |
| KRH41404 | Soybean | nucleus | 49.28 | 49.42 |
| Os11t0523800-01 | Rice | nucleus | 15.68 | 47.81 |
| Os06t0196700-02 | Rice | nucleus | 43.19 | 45.69 |
| Os04t0671900-01 | Rice | nucleus | 32.44 | 44.25 |
| Os02t0164900-01 | Rice | nucleus | 35.48 | 43.61 |
| Os06t0677800-01 | Rice | nucleus | 35.57 | 43.29 |
| Os12t0613700-01 | Rice | nucleus | 33.24 | 41.27 |
| Os02t0557200-01 | Rice | nucleus | 23.12 | 38.05 |
| Os04t0442000-01 | Rice | nucleus | 21.95 | 36.4 |
| Os04t0664400-01 | Rice | nucleus | 29.21 | 35.43 |
| Os01t0927600-01 | Rice | nucleus | 24.1 | 33.29 |
| Os12t0479400-02 | Rice | nucleus | 24.37 | 32.34 |
| Os01t0236300-01 | Rice | nucleus | 20.07 | 32.05 |
Protein Annotations
| MapMan:15.5.5.1 | Gene3D:2.30.30.1040 | Gene3D:2.40.330.10 | Gene3D:3.10.20.90 | UniProt:A0A0P0VEL8 | InterPro:AUX/IAA_dom |
| InterPro:Auxin_resp | InterPro:B3_DNA-bd | ProteinID:BAS76922.1 | ncoils:Coil | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009725 |
| GO:GO:0009734 | GO:GO:0009987 | InterPro:IPR000270 | InterPro:IPR003340 | InterPro:IPR015300 | EnsemblPlantsGene:Os02g0141100 |
| EnsemblPlants:Os02t0141100-00 | InterPro:PB1_dom | PFAM:PF02309 | PFAM:PF02362 | PFAM:PF06507 | PFscan:PS50863 |
| PFscan:PS51745 | PANTHER:PTHR31384 | PANTHER:PTHR31384:SF14 | SMART:SM01019 | SUPFAM:SSF101936 | SUPFAM:SSF54277 |
| UniParc:UPI000393A6C6 | SEG:seg | : | : | : | : |
Description
AUXIN RESPONSE FACTOR 5Similar to Auxin response factor 5. (Os02t0141100-00)
Coordinates
chr2:-:2207998..2214514
Molecular Weight (calculated)
124273.0 Da
IEP (calculated)
6.617
GRAVY (calculated)
-0.511
Length
1116 amino acids
Sequence
(BLAST)
(BLAST)
0001: RGGCGGAGER KAAAINSELW HACAGPLVSL PPVGSLVVYF PQGHSEQVAA SMQKDVDAHV PSYPNLPSKL ICLLHGVNLH ADPDTDEVYA QMTLQPVNTY
0101: GKEALQISEL ALKQARPQME FFCKTLTASD TSTHGGFSVP RRAAEKIFPP LDFSMQPPAQ ELQARDIHDN VWTFRHIYRG QPKRHLLTTG WSLFVSGKRL
0201: FAGDSVIVVR DEKHQLLLGI RRANRQPTNI SSSVLSSDSM HIGVLAAAAH AAANSSPFTI FYNPRASPTE FVIPFAKYQK ALYSNQISLG MRFRMMFETE
0301: ELGTRRYMGT ITGISDLDPV RWKNSQWRNL QVGWDESAAG ERRNRVSIWE IEPVAAPFFL CPQPFFGVKR PRQLDDESEM ENLFKRAMPW LGEEVCIKDT
0401: QNQNSTAPGL SLVQWMNMNR QQSSSLANTA AQSEYLQALG NPAMQNLAAD ELARQLYVQN NLLQQNCIQF NSPKLPQQMQ TMNDLSKAAI PLNQLGAIIN
0501: PQDQKQDAVN HQRQQNSIQV IPLSQAQSNL VQAQVIVQNQ MQQQKPSPTQ NPQRINGQRL LLSHQQKDQN LQLQQQLLLQ QKQQLQQQQQ QQQQNQQQLN
0601: KSLGQLVNLA SQQSKLFDEE LQLQILQKLQ QQSLMSQSTS TLSQPPLIQE QQKLITDMQK QLSNSHSLAQ QQMMPQQEIK PSLQATPLLP TVQQEQQQKL
0701: LQKQVSLADV SGVAFQPISS TNVIPKTGGA MIISGATQSV VTEEMPSCST SPSTANGNHF TQSTKNRHCI NTERLPPSTA PMLIPTSIDA VTATPLMTKE
0801: LPKPNNNVKQ SVVNSKLPNV APGPQNCINH ALQTDNLETS SSATSLCPSR TDGLVHQGFP SSNFNQHQMF KDALPDVEME GVDPSNSGLF GINNDNLLGF
0901: PIETEDLLIN ALDSVKYQNH ISTDVENNYP MQKDALQEIS TSMVSQSFGQ SDMAFNSIDS AINDGAFLNK NSWPAAPLLQ RMRTFTKVYK RGAVGRSIDI
1001: GRYSGYEELK HALARMFGIE GQLEDRQRIG WKLVYKDHED DILLLGDDPW EEFVNCVRCI RILSPQEVQQ MSLDGDLGSN VLPNQACSSS DGVNGWRPRC
1101: DQNPGNPSIG PYDQFE
0101: GKEALQISEL ALKQARPQME FFCKTLTASD TSTHGGFSVP RRAAEKIFPP LDFSMQPPAQ ELQARDIHDN VWTFRHIYRG QPKRHLLTTG WSLFVSGKRL
0201: FAGDSVIVVR DEKHQLLLGI RRANRQPTNI SSSVLSSDSM HIGVLAAAAH AAANSSPFTI FYNPRASPTE FVIPFAKYQK ALYSNQISLG MRFRMMFETE
0301: ELGTRRYMGT ITGISDLDPV RWKNSQWRNL QVGWDESAAG ERRNRVSIWE IEPVAAPFFL CPQPFFGVKR PRQLDDESEM ENLFKRAMPW LGEEVCIKDT
0401: QNQNSTAPGL SLVQWMNMNR QQSSSLANTA AQSEYLQALG NPAMQNLAAD ELARQLYVQN NLLQQNCIQF NSPKLPQQMQ TMNDLSKAAI PLNQLGAIIN
0501: PQDQKQDAVN HQRQQNSIQV IPLSQAQSNL VQAQVIVQNQ MQQQKPSPTQ NPQRINGQRL LLSHQQKDQN LQLQQQLLLQ QKQQLQQQQQ QQQQNQQQLN
0601: KSLGQLVNLA SQQSKLFDEE LQLQILQKLQ QQSLMSQSTS TLSQPPLIQE QQKLITDMQK QLSNSHSLAQ QQMMPQQEIK PSLQATPLLP TVQQEQQQKL
0701: LQKQVSLADV SGVAFQPISS TNVIPKTGGA MIISGATQSV VTEEMPSCST SPSTANGNHF TQSTKNRHCI NTERLPPSTA PMLIPTSIDA VTATPLMTKE
0801: LPKPNNNVKQ SVVNSKLPNV APGPQNCINH ALQTDNLETS SSATSLCPSR TDGLVHQGFP SSNFNQHQMF KDALPDVEME GVDPSNSGLF GINNDNLLGF
0901: PIETEDLLIN ALDSVKYQNH ISTDVENNYP MQKDALQEIS TSMVSQSFGQ SDMAFNSIDS AINDGAFLNK NSWPAAPLLQ RMRTFTKVYK RGAVGRSIDI
1001: GRYSGYEELK HALARMFGIE GQLEDRQRIG WKLVYKDHED DILLLGDDPW EEFVNCVRCI RILSPQEVQQ MSLDGDLGSN VLPNQACSSS DGVNGWRPRC
1101: DQNPGNPSIG PYDQFE
0001: MKAPSNGFLP SSNEGEKKPI NSQLWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMQKQ TDFIPNYPNL PSKLICLLHS VTLHADTETD EVYAQMTLQP
0101: VNKYDREALL ASDMGLKLNR QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIVAKD LHDTTWTFRH IYRGQPKRHL LTTGWSVFVS
0201: TKRLFAGDSV LFVRDEKSQL MLGIRRANRQ TPTLSSSVIS SDSMHIGILA AAAHANANSS PFTIFFNPRA SPSEFVVPLA KYNKALYAQV SLGMRFRMMF
0301: ETEDCGVRRY MGTVTGISDL DPVRWKGSQW RNLQVGWDES TAGDRPSRVS IWEIEPVITP FYICPPPFFR PKYPRQPGMP DDELDMENAF KRAMPWMGED
0401: FGMKDAQSSM FPGLSLVQWM SMQQNNPLSG SATPQLPSAL SSFNLPNNFA SNDPSKLLNF QSPNLSSANS QFNKPNTVNH ISQQMQAQPA MVKSQQQQQQ
0501: QQQQHQHQQQ QLQQQQQLQM SQQQVQQQGI YNNGTIAVAN QVSCQSPNQP TGFSQSQLQQ QSMLPTGAKM THQNINSMGN KGLSQMTSFA QEMQFQQQLE
0601: MHNSSQLLRN QQEQSSLHSL QQNLSQNPQQ LQMQQQSSKP SPSQQLQLQL LQKLQQQQQQ QSIPPVSSSL QPQLSALQQT QSHQLQQLLS SQNQQPLAHG
0701: NNSFPASTFM QPPQIQVSPQ QQGQMSNKNL VAAGRSHSGH TDGEAPSCST SPSANNTGHD NVSPTNFLSR NQQQGQAASV SASDSVFERA SNPVQELYTK
0801: TESRISQGMM NMKSAGEHFR FKSAVTDQID VSTAGTTYCP DVVGPVQQQQ TFPLPSFGFD GDCQSHHPRN NLAFPGNLEA VTSDPLYSQK DFQNLVPNYG
0901: NTPRDIETEL SSAAISSQSF GIPSIPFKPG CSNEVGGIND SGIMNGGGLW PNQTQRMRTY TKVQKRGSVG RSIDVTRYSG YDELRHDLAR MFGIEGQLED
1001: PLTSDWKLVY TDHENDILLV GDDPWEEFVN CVQNIKILSS VEVQQMSLDG DLAAIPTTNQ ACSETDSGNA WKVHYEDTSA AASFNR
0101: VNKYDREALL ASDMGLKLNR QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIVAKD LHDTTWTFRH IYRGQPKRHL LTTGWSVFVS
0201: TKRLFAGDSV LFVRDEKSQL MLGIRRANRQ TPTLSSSVIS SDSMHIGILA AAAHANANSS PFTIFFNPRA SPSEFVVPLA KYNKALYAQV SLGMRFRMMF
0301: ETEDCGVRRY MGTVTGISDL DPVRWKGSQW RNLQVGWDES TAGDRPSRVS IWEIEPVITP FYICPPPFFR PKYPRQPGMP DDELDMENAF KRAMPWMGED
0401: FGMKDAQSSM FPGLSLVQWM SMQQNNPLSG SATPQLPSAL SSFNLPNNFA SNDPSKLLNF QSPNLSSANS QFNKPNTVNH ISQQMQAQPA MVKSQQQQQQ
0501: QQQQHQHQQQ QLQQQQQLQM SQQQVQQQGI YNNGTIAVAN QVSCQSPNQP TGFSQSQLQQ QSMLPTGAKM THQNINSMGN KGLSQMTSFA QEMQFQQQLE
0601: MHNSSQLLRN QQEQSSLHSL QQNLSQNPQQ LQMQQQSSKP SPSQQLQLQL LQKLQQQQQQ QSIPPVSSSL QPQLSALQQT QSHQLQQLLS SQNQQPLAHG
0701: NNSFPASTFM QPPQIQVSPQ QQGQMSNKNL VAAGRSHSGH TDGEAPSCST SPSANNTGHD NVSPTNFLSR NQQQGQAASV SASDSVFERA SNPVQELYTK
0801: TESRISQGMM NMKSAGEHFR FKSAVTDQID VSTAGTTYCP DVVGPVQQQQ TFPLPSFGFD GDCQSHHPRN NLAFPGNLEA VTSDPLYSQK DFQNLVPNYG
0901: NTPRDIETEL SSAAISSQSF GIPSIPFKPG CSNEVGGIND SGIMNGGGLW PNQTQRMRTY TKVQKRGSVG RSIDVTRYSG YDELRHDLAR MFGIEGQLED
1001: PLTSDWKLVY TDHENDILLV GDDPWEEFVN CVQNIKILSS VEVQQMSLDG DLAAIPTTNQ ACSETDSGNA WKVHYEDTSA AASFNR
Arabidopsis Description
ARF19Auxin response factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q8RYC8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.