Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P14090_001 | Banana | nucleus | 76.98 | 82.31 |
| GSMUA_Achr8P23850_001 | Banana | nucleus | 78.11 | 71.23 |
| GSMUA_Achr5P05010_001 | Banana | nucleus | 63.41 | 70.84 |
| Os06t0702600-01 | Rice | nucleus | 68.55 | 67.31 |
| GSMUA_Achr8P13630_001 | Banana | cytosol, nucleus, plastid | 19.12 | 62.21 |
| GSMUA_Achr6P01740_001 | Banana | nucleus | 65.16 | 61.02 |
| EER90336 | Sorghum | nucleus | 72.05 | 60.48 |
| Os02t0141100-00 | Rice | nucleus | 68.45 | 59.68 |
| TraesCS7A01G416400.1 | Wheat | nucleus | 71.74 | 59.51 |
| TraesCS7D01G409700.1 | Wheat | nucleus | 71.74 | 59.4 |
| TraesCS7B01G316600.1 | Wheat | nucleus | 71.63 | 59.37 |
| TraesCS6D01G102300.1 | Wheat | nucleus | 68.45 | 58.99 |
| OQU84350 | Sorghum | nucleus | 64.75 | 58.88 |
| Zm00001d014690_P014 | Maize | nucleus | 72.15 | 58.79 |
| TraesCS6A01G113000.1 | Wheat | nucleus | 68.55 | 58.77 |
| VIT_11s0065g00310.t01 | Wine grape | nucleus | 67.32 | 58.74 |
| TraesCS6B01G141300.2 | Wheat | nucleus | 68.14 | 58.62 |
| HORVU6Hr1G020330.30 | Barley | nucleus | 68.45 | 58.37 |
| HORVU7Hr1G096460.7 | Barley | mitochondrion, nucleus, vacuole | 70.2 | 56.82 |
| Zm00001d015243_P001 | Maize | nucleus | 63.72 | 56.78 |
| Solyc07g016180.2.1 | Tomato | nucleus | 64.44 | 56.38 |
| PGSC0003DMT400025312 | Potato | nucleus | 63.93 | 55.83 |
| KRH49070 | Soybean | nucleus | 62.38 | 54.68 |
| GSMUA_Achr3P10240_001 | Banana | nucleus | 34.74 | 54.52 |
| KRH74145 | Soybean | nucleus | 60.53 | 53.35 |
| Solyc05g047460.2.1 | Tomato | nucleus | 60.02 | 53.24 |
| PGSC0003DMT400035592 | Potato | nucleus | 59.81 | 53.05 |
| GSMUA_Achr9P18170_001 | Banana | nucleus | 46.35 | 52.81 |
| KRH60117 | Soybean | nucleus | 57.86 | 51.23 |
| KRH41404 | Soybean | nucleus | 57.97 | 50.67 |
| GSMUA_Achr5P26580_001 | Banana | nucleus | 38.64 | 46.59 |
| GSMUA_Achr3P23290_001 | Banana | nucleus | 39.26 | 46.59 |
| GSMUA_Achr5P02450_001 | Banana | nucleus | 39.47 | 46.38 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 24.05 | 45.79 |
| GSMUA_Achr11P... | Banana | nucleus | 38.95 | 45.72 |
| GSMUA_Achr4P25960_001 | Banana | nucleus | 37.0 | 44.94 |
| GSMUA_Achr11P... | Banana | nucleus | 37.41 | 44.94 |
| GSMUA_Achr6P19850_001 | Banana | nucleus | 39.16 | 44.56 |
| GSMUA_Achr5P00590_001 | Banana | nucleus | 40.19 | 43.01 |
| GSMUA_Achr11P... | Banana | nucleus | 39.98 | 42.61 |
| GSMUA_Achr1P20040_001 | Banana | nucleus | 33.4 | 41.56 |
| GSMUA_Achr1P08230_001 | Banana | mitochondrion | 27.95 | 40.96 |
| GSMUA_Achr6P36980_001 | Banana | nucleus | 34.22 | 38.81 |
| GSMUA_Achr9P08310_001 | Banana | vacuole | 19.22 | 38.4 |
| GSMUA_Achr10P... | Banana | nucleus | 25.9 | 37.39 |
| GSMUA_Achr2P19760_001 | Banana | nucleus | 25.39 | 36.98 |
| GSMUA_Achr6P07390_001 | Banana | nucleus | 24.87 | 36.95 |
| GSMUA_Achr6P12780_001 | Banana | nucleus | 26.1 | 36.49 |
| GSMUA_Achr10P... | Banana | nucleus | 24.67 | 35.98 |
| GSMUA_Achr6P29070_001 | Banana | nucleus, vacuole | 24.97 | 34.86 |
| GSMUA_AchrUn_... | Banana | nucleus | 22.71 | 34.8 |
| GSMUA_Achr7P24330_001 | Banana | nucleus | 23.02 | 33.63 |
| GSMUA_Achr8P13620_001 | Banana | nucleus | 16.55 | 33.26 |
| GSMUA_Achr1P20000_001 | Banana | nucleus | 32.68 | 32.75 |
| GSMUA_Achr6P08090_001 | Banana | nucleus | 27.65 | 32.65 |
| GSMUA_Achr10P... | Banana | nucleus | 26.93 | 31.8 |
| GSMUA_Achr6P16450_001 | Banana | nucleus | 27.54 | 30.7 |
| GSMUA_AchrUn_... | Banana | nucleus | 27.13 | 29.86 |
| GSMUA_Achr1P20010_001 | Banana | plasma membrane, plastid | 31.45 | 29.14 |
Protein Annotations
| MapMan:15.5.5.1 | Gene3D:2.30.30.1040 | Gene3D:2.40.330.10 | Gene3D:3.10.20.90 | InterPro:AUX/IAA_dom | InterPro:Auxin_resp |
| InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009725 | GO:GO:0009734 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr3G05460_001 |
| EnsemblPlants:GSMUA_Achr3P05460_001 | EnsemblPlants:GSMUA_Achr3T05460_001 | InterPro:IPR000270 | InterPro:IPR003340 | InterPro:IPR015300 | UniProt:M0SC14 |
| InterPro:PB1_dom | PFAM:PF02309 | PFAM:PF02362 | PFAM:PF06507 | PFscan:PS50863 | PFscan:PS51745 |
| PANTHER:PTHR31384 | PANTHER:PTHR31384:SF14 | SMART:SM01019 | SUPFAM:SSF101936 | SUPFAM:SSF54277 | UniParc:UPI000295649D |
| SEG:seg | : | : | : | : | : |
Description
Auxin response factor 5 [Source:GMGC_GENE;Acc:GSMUA_Achr3G05460_001]
Coordinates
chr3:-:3622133..3631637
Molecular Weight (calculated)
109164.0 Da
IEP (calculated)
6.993
GRAVY (calculated)
-0.551
Length
973 amino acids
Sequence
(BLAST)
(BLAST)
001: MKAAAHGAAA PNPCEGERKT INPELWYACA GPLVTVPPVG SLVVYFPQGH SEQVAASMQR DIDAHIPNYP NLPSKLICLL HNVTLHADPE TDEVYAQMTL
101: QPVNSYDKEA LQASELALKQ TRPQTEFFCK TLTASDTSTH GGFSVPRRAA EKIFPPLDFS MQPPAQELEA RDLHDNLWTF RHIYRGQPKR HLLTTGWSLF
201: VSGKRLFAGD SVLFISQKIK ILVKAYVFLI HYLMCRDQKQ QLLLGIRRAN RQPTNIQSSV LSTDSMHIGI LAAAAHAAAN HSPFTIFYNP RASPSEFVIP
301: FAKYQKAVYS NQISLGMRFR MMFETEELGT RRYMGTITGI SDLDPVRWKN SQWRNLQVGW DESAAGERRN RVSIWEIEPV VAPFFICPPP FFRKRPRQPG
401: MPDDESSEME NLFKRAMPWL GEEICIKDSQ TQNTIMPGLS LVQWMNMQQN PSLANQTLQT EYLRSLTGPV MQNLGPTDIS RQLGLQAQML QQNNIQFNTG
501: RLPQQGQQVD EHAKVSVPLN QVSAVSRAPQ QMQDPSMQQK QQLVNQALPV NQTQNNIIQP QALVQTQVQP QQQQQQQPPM IQNNQLLLQT LQQQQQQQQS
601: LFSQPRTQQP QLPQVQEYQR TLPDVPQQLS NSHSLLQQSV IPQQCAKPTS QSVRLPQPLQ NQSQQKPQQP QVLIRAQSGV TDDIPSCSTS PSANNGMILP
701: HAILNRNEHR NPMSTEKTSK SPSLLRDAPP DGDVPGTDPR NNVLFGVNIE GSMGMPLATD TLLVNNIDSG KYQNHIPGDL VANYNTSKDA QQELSSSMVS
801: QSFGVPDMAF NSIDSTINDS ALLNRNSFAP APPPPLQRMR TYTKVYKRGA VGRSIDIARY SGYDELKHDL ARMFSIEGQL EDRQRIGWKL VYVDHENDVL
901: LVGDDPWEEF VNCVRCIKIL SPQEVQQMSL DVDLGNNNLP NQACSSSDGG NVWRGHCDQN SGNPSAGSYD HFE
101: QPVNSYDKEA LQASELALKQ TRPQTEFFCK TLTASDTSTH GGFSVPRRAA EKIFPPLDFS MQPPAQELEA RDLHDNLWTF RHIYRGQPKR HLLTTGWSLF
201: VSGKRLFAGD SVLFISQKIK ILVKAYVFLI HYLMCRDQKQ QLLLGIRRAN RQPTNIQSSV LSTDSMHIGI LAAAAHAAAN HSPFTIFYNP RASPSEFVIP
301: FAKYQKAVYS NQISLGMRFR MMFETEELGT RRYMGTITGI SDLDPVRWKN SQWRNLQVGW DESAAGERRN RVSIWEIEPV VAPFFICPPP FFRKRPRQPG
401: MPDDESSEME NLFKRAMPWL GEEICIKDSQ TQNTIMPGLS LVQWMNMQQN PSLANQTLQT EYLRSLTGPV MQNLGPTDIS RQLGLQAQML QQNNIQFNTG
501: RLPQQGQQVD EHAKVSVPLN QVSAVSRAPQ QMQDPSMQQK QQLVNQALPV NQTQNNIIQP QALVQTQVQP QQQQQQQPPM IQNNQLLLQT LQQQQQQQQS
601: LFSQPRTQQP QLPQVQEYQR TLPDVPQQLS NSHSLLQQSV IPQQCAKPTS QSVRLPQPLQ NQSQQKPQQP QVLIRAQSGV TDDIPSCSTS PSANNGMILP
701: HAILNRNEHR NPMSTEKTSK SPSLLRDAPP DGDVPGTDPR NNVLFGVNIE GSMGMPLATD TLLVNNIDSG KYQNHIPGDL VANYNTSKDA QQELSSSMVS
801: QSFGVPDMAF NSIDSTINDS ALLNRNSFAP APPPPLQRMR TYTKVYKRGA VGRSIDIARY SGYDELKHDL ARMFSIEGQL EDRQRIGWKL VYVDHENDVL
901: LVGDDPWEEF VNCVRCIKIL SPQEVQQMSL DVDLGNNNLP NQACSSSDGG NVWRGHCDQN SGNPSAGSYD HFE
0001: MKAPSNGFLP SSNEGEKKPI NSQLWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMQKQ TDFIPNYPNL PSKLICLLHS VTLHADTETD EVYAQMTLQP
0101: VNKYDREALL ASDMGLKLNR QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIVAKD LHDTTWTFRH IYRGQPKRHL LTTGWSVFVS
0201: TKRLFAGDSV LFVRDEKSQL MLGIRRANRQ TPTLSSSVIS SDSMHIGILA AAAHANANSS PFTIFFNPRA SPSEFVVPLA KYNKALYAQV SLGMRFRMMF
0301: ETEDCGVRRY MGTVTGISDL DPVRWKGSQW RNLQVGWDES TAGDRPSRVS IWEIEPVITP FYICPPPFFR PKYPRQPGMP DDELDMENAF KRAMPWMGED
0401: FGMKDAQSSM FPGLSLVQWM SMQQNNPLSG SATPQLPSAL SSFNLPNNFA SNDPSKLLNF QSPNLSSANS QFNKPNTVNH ISQQMQAQPA MVKSQQQQQQ
0501: QQQQHQHQQQ QLQQQQQLQM SQQQVQQQGI YNNGTIAVAN QVSCQSPNQP TGFSQSQLQQ QSMLPTGAKM THQNINSMGN KGLSQMTSFA QEMQFQQQLE
0601: MHNSSQLLRN QQEQSSLHSL QQNLSQNPQQ LQMQQQSSKP SPSQQLQLQL LQKLQQQQQQ QSIPPVSSSL QPQLSALQQT QSHQLQQLLS SQNQQPLAHG
0701: NNSFPASTFM QPPQIQVSPQ QQGQMSNKNL VAAGRSHSGH TDGEAPSCST SPSANNTGHD NVSPTNFLSR NQQQGQAASV SASDSVFERA SNPVQELYTK
0801: TESRISQGMM NMKSAGEHFR FKSAVTDQID VSTAGTTYCP DVVGPVQQQQ TFPLPSFGFD GDCQSHHPRN NLAFPGNLEA VTSDPLYSQK DFQNLVPNYG
0901: NTPRDIETEL SSAAISSQSF GIPSIPFKPG CSNEVGGIND SGIMNGGGLW PNQTQRMRTY TKVQKRGSVG RSIDVTRYSG YDELRHDLAR MFGIEGQLED
1001: PLTSDWKLVY TDHENDILLV GDDPWEEFVN CVQNIKILSS VEVQQMSLDG DLAAIPTTNQ ACSETDSGNA WKVHYEDTSA AASFNR
0101: VNKYDREALL ASDMGLKLNR QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIVAKD LHDTTWTFRH IYRGQPKRHL LTTGWSVFVS
0201: TKRLFAGDSV LFVRDEKSQL MLGIRRANRQ TPTLSSSVIS SDSMHIGILA AAAHANANSS PFTIFFNPRA SPSEFVVPLA KYNKALYAQV SLGMRFRMMF
0301: ETEDCGVRRY MGTVTGISDL DPVRWKGSQW RNLQVGWDES TAGDRPSRVS IWEIEPVITP FYICPPPFFR PKYPRQPGMP DDELDMENAF KRAMPWMGED
0401: FGMKDAQSSM FPGLSLVQWM SMQQNNPLSG SATPQLPSAL SSFNLPNNFA SNDPSKLLNF QSPNLSSANS QFNKPNTVNH ISQQMQAQPA MVKSQQQQQQ
0501: QQQQHQHQQQ QLQQQQQLQM SQQQVQQQGI YNNGTIAVAN QVSCQSPNQP TGFSQSQLQQ QSMLPTGAKM THQNINSMGN KGLSQMTSFA QEMQFQQQLE
0601: MHNSSQLLRN QQEQSSLHSL QQNLSQNPQQ LQMQQQSSKP SPSQQLQLQL LQKLQQQQQQ QSIPPVSSSL QPQLSALQQT QSHQLQQLLS SQNQQPLAHG
0701: NNSFPASTFM QPPQIQVSPQ QQGQMSNKNL VAAGRSHSGH TDGEAPSCST SPSANNTGHD NVSPTNFLSR NQQQGQAASV SASDSVFERA SNPVQELYTK
0801: TESRISQGMM NMKSAGEHFR FKSAVTDQID VSTAGTTYCP DVVGPVQQQQ TFPLPSFGFD GDCQSHHPRN NLAFPGNLEA VTSDPLYSQK DFQNLVPNYG
0901: NTPRDIETEL SSAAISSQSF GIPSIPFKPG CSNEVGGIND SGIMNGGGLW PNQTQRMRTY TKVQKRGSVG RSIDVTRYSG YDELRHDLAR MFGIEGQLED
1001: PLTSDWKLVY TDHENDILLV GDDPWEEFVN CVQNIKILSS VEVQQMSLDG DLAAIPTTNQ ACSETDSGNA WKVHYEDTSA AASFNR
Arabidopsis Description
ARF19Auxin response factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q8RYC8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.