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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:nucleus
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr1P20000_001
GSMUA_Achr1P20010_001
GSMUA_Achr1P20040_001
GSMUA_Achr2P12630_001
GSMUA_Achr2P19760_001
GSMUA_Achr3P16300_001
GSMUA_Achr4P05200_001
GSMUA_Achr4P21020_001
GSMUA_Achr4P21030_001
GSMUA_Achr4P22520_001
GSMUA_Achr4P22530_001
GSMUA_Achr5P03110_001
GSMUA_Achr5P09310_001
GSMUA_Achr6P07390_001
GSMUA_Achr6P12780_001
GSMUA_Achr6P29070_001
GSMUA_Achr6P36980_001
GSMUA_Achr7P13680_001
GSMUA_Achr7P24330_001
GSMUA_Achr8P20610_001
GSMUA_Achr8P20620_001
GSMUA_Achr8P29850_001
GSMUA_Achr9P08310_001
GSMUA_Achr9P10690_001
GSMUA_Achr9P10700_001
GSMUA_Achr9P16800_001
GSMUA_Achr9P24330_001
GSMUA_Achr9P25550_001
GSMUA_Achr9P26900_001
GSMUA_Achr9P26910_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G19850.1 GSMUA_Achr10P... AT1G04250.1 21734647
AT1G19850.1 GSMUA_Achr4P21020_001 AT1G04250.1 21734647
AT1G19850.1 GSMUA_Achr4P22520_001 AT1G04250.1 21734647
AT1G19850.1 GSMUA_Achr8P20610_001 AT1G04250.1 21734647
AT1G19850.1 GSMUA_Achr9P10700_001 AT1G04250.1 21734647
AT1G19850.1 GSMUA_Achr9P25550_001 AT1G04250.1 21734647
AT1G19850.1 GSMUA_Achr1P20000_001 AT1G19850.1 14729917
AT1G19850.1 GSMUA_Achr1P20010_001 AT1G19850.1 14729917
AT1G19850.1 GSMUA_Achr1P20040_001 AT1G19850.1 14729917
AT1G19850.1 GSMUA_Achr6P36980_001 AT1G19850.1 14729917
AT1G19850.1 GSMUA_Achr1P20000_001 AT1G19850.1 21734647
AT1G19850.1 GSMUA_Achr1P20010_001 AT1G19850.1 21734647
AT1G19850.1 GSMUA_Achr1P20040_001 AT1G19850.1 21734647
AT1G19850.1 GSMUA_Achr6P36980_001 AT1G19850.1 21734647
AT1G19850.1 GSMUA_Achr1P20000_001 AT1G19850.1 22096563
AT1G19850.1 GSMUA_Achr1P20010_001 AT1G19850.1 22096563
AT1G19850.1 GSMUA_Achr1P20040_001 AT1G19850.1 22096563
AT1G19850.1 GSMUA_Achr6P36980_001 AT1G19850.1 22096563
AT1G19850.1 GSMUA_Achr1P20000_001 AT1G19850.1 24485461
AT1G19850.1 GSMUA_Achr1P20010_001 AT1G19850.1 24485461
AT1G19850.1 GSMUA_Achr1P20040_001 AT1G19850.1 24485461
AT1G19850.1 GSMUA_Achr6P36980_001 AT1G19850.1 24485461
AT1G19850.1 GSMUA_Achr10P... AT1G59750.1 22096563
AT1G19850.1 GSMUA_Achr6P07390_001 AT1G59750.1 22096563
AT1G19850.1 GSMUA_Achr6P12780_001 AT1G59750.1 22096563
AT1G19850.1 GSMUA_Achr6P29070_001 AT1G59750.1 22096563
AT1G19850.1 GSMUA_Achr9P08310_001 AT1G59750.1 22096563
AT1G19850.1 GSMUA_Achr8P29850_001 AT3G17600.1 21734647
AT1G19850.1 GSMUA_Achr9P16800_001 AT3G17600.1 21734647
AT1G19850.1 GSMUA_Achr10P... AT3G23050.1 21734647
AT1G19850.1 GSMUA_Achr4P21020_001 AT3G23050.1 21734647
AT1G19850.1 GSMUA_Achr4P22520_001 AT3G23050.1 21734647
AT1G19850.1 GSMUA_Achr8P20610_001 AT3G23050.1 21734647
AT1G19850.1 GSMUA_Achr9P10700_001 AT3G23050.1 21734647
AT1G19850.1 GSMUA_Achr9P25550_001 AT3G23050.1 21734647
AT1G19850.1 GSMUA_Achr10P... AT3G61830.1 22096563
AT1G19850.1 GSMUA_Achr2P19760_001 AT3G61830.1 22096563
AT1G19850.1 GSMUA_Achr7P24330_001 AT3G61830.1 22096563
AT1G19850.1 GSMUA_AchrUn_... AT3G61830.1 22096563
AT1G19850.1 GSMUA_Achr11P... AT4G14560.1 14729917
AT1G19850.1 GSMUA_Achr2P12630_001 AT4G14560.1 14729917
AT1G19850.1 GSMUA_Achr4P05200_001 AT4G14560.1 14729917
AT1G19850.1 GSMUA_Achr4P21030_001 AT4G14560.1 14729917
AT1G19850.1 GSMUA_Achr4P22530_001 AT4G14560.1 14729917
AT1G19850.1 GSMUA_Achr5P03110_001 AT4G14560.1 14729917
AT1G19850.1 GSMUA_Achr8P20620_001 AT4G14560.1 14729917
AT1G19850.1 GSMUA_Achr9P10690_001 AT4G14560.1 14729917
AT1G19850.1 GSMUA_Achr9P24330_001 AT4G14560.1 14729917
AT1G19850.1 GSMUA_Achr11P... AT4G14560.1 22096563
AT1G19850.1 GSMUA_Achr2P12630_001 AT4G14560.1 22096563
AT1G19850.1 GSMUA_Achr4P05200_001 AT4G14560.1 22096563
AT1G19850.1 GSMUA_Achr4P21030_001 AT4G14560.1 22096563
AT1G19850.1 GSMUA_Achr4P22530_001 AT4G14560.1 22096563
AT1G19850.1 GSMUA_Achr5P03110_001 AT4G14560.1 22096563
AT1G19850.1 GSMUA_Achr8P20620_001 AT4G14560.1 22096563
AT1G19850.1 GSMUA_Achr9P10690_001 AT4G14560.1 22096563
AT1G19850.1 GSMUA_Achr9P24330_001 AT4G14560.1 22096563
AT1G19850.1 GSMUA_Achr11P... AT4G14560.1 9342315
AT1G19850.1 GSMUA_Achr2P12630_001 AT4G14560.1 9342315
AT1G19850.1 GSMUA_Achr4P05200_001 AT4G14560.1 9342315
AT1G19850.1 GSMUA_Achr4P21030_001 AT4G14560.1 9342315
AT1G19850.1 GSMUA_Achr4P22530_001 AT4G14560.1 9342315
AT1G19850.1 GSMUA_Achr5P03110_001 AT4G14560.1 9342315
AT1G19850.1 GSMUA_Achr8P20620_001 AT4G14560.1 9342315
AT1G19850.1 GSMUA_Achr9P10690_001 AT4G14560.1 9342315
AT1G19850.1 GSMUA_Achr9P24330_001 AT4G14560.1 9342315
AT1G19850.1 GSMUA_Achr9P26900_001 AT4G32280.1 21734647
AT1G19850.1 GSMUA_Achr9P26910_001 AT4G32280.1 21734647
AT1G19850.1 GSMUA_Achr3P16300_001 AT5G25890.1 21734647
AT1G19850.1 GSMUA_Achr5P09310_001 AT5G25890.1 21734647
AT1G19850.1 GSMUA_Achr7P13680_001 AT5G25890.1 21734647
AT1G19850.1 GSMUA_AchrUn_... AT5G25890.1 21734647
AT1G19850.1 GSMUA_Achr3P16300_001 AT5G25890.1 22096563
AT1G19850.1 GSMUA_Achr5P09310_001 AT5G25890.1 22096563
AT1G19850.1 GSMUA_Achr7P13680_001 AT5G25890.1 22096563
AT1G19850.1 GSMUA_AchrUn_... AT5G25890.1 22096563
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr1P20040_001 Banana nucleus 68.88 75.58
Bra025775.1-P Field mustard nucleus 37.06 67.66
GSMUA_Achr8P13630_001 Banana cytosol, nucleus, plastid 20.86 59.87
GSMUA_Achr1P20000_001 Banana nucleus 65.27 57.67
GSMUA_Achr1P20010_001 Banana plasma membrane, plastid 61.19 50.0
Os04t0664400-01 Rice nucleus 51.17 47.72
Bra016492.1-P Field mustard nucleus 45.92 47.13
EES13038 Sorghum nucleus 51.75 46.93
CDY62586 Canola nucleus 46.15 46.81
TraesCS2D01G491200.2 Wheat nucleus 51.98 46.7
TraesCS2B01G519200.2 Wheat nucleus 51.98 46.7
CDX83741 Canola nucleus 46.04 46.69
TraesCS2A01G491000.1 Wheat nucleus 51.86 46.6
Zm00001d001945_P002 Maize nucleus 51.28 46.41
HORVU2Hr1G109650.18 Barley nucleus 51.63 46.29
VIT_18s0001g13930.t01 Wine grape nucleus 51.4 46.27
Zm00001d026540_P002 Maize nucleus 51.4 45.99
CDY61164 Canola nucleus 45.92 45.76
KRH05923 Soybean nucleus 49.42 45.44
KRH17404 Soybean nucleus 49.18 45.38
CDY29392 Canola nucleus 46.15 45.21
Solyc04g081240.2.1 Tomato nucleus 48.95 45.16
CDY01393 Canola nucleus 45.34 44.97
PGSC0003DMT400009660 Potato nucleus 48.6 44.89
Bra012190.1-P Field mustard nucleus 45.34 44.87
CDY39348 Canola nucleus 45.8 44.71
AT1G19850.1 Thale cress nucleus 46.85 44.57
GSMUA_AchrUn_... Banana mitochondrion 26.34 44.23
GSMUA_Achr3P10240_001 Banana nucleus 29.72 41.13
GSMUA_Achr3P23290_001 Banana nucleus 38.23 40.0
GSMUA_Achr5P02450_001 Banana nucleus 38.34 39.73
GSMUA_Achr4P25960_001 Banana nucleus 37.06 39.7
GSMUA_Achr5P26580_001 Banana nucleus 37.06 39.41
GSMUA_Achr11P... Banana nucleus 37.88 39.2
GSMUA_Achr11P... Banana nucleus 36.95 39.14
GSMUA_Achr6P19850_001 Banana nucleus 38.23 38.36
GSMUA_Achr9P18170_001 Banana nucleus 37.53 37.7
GSMUA_Achr9P14090_001 Banana nucleus 39.16 36.92
GSMUA_Achr5P00590_001 Banana nucleus 38.69 36.52
GSMUA_Achr11P... Banana nucleus 38.23 35.93
GSMUA_Achr1P08230_001 Banana mitochondrion 27.39 35.39
GSMUA_Achr9P08310_001 Banana vacuole 19.93 35.11
GSMUA_Achr3P05460_001 Banana nucleus 38.81 34.22
GSMUA_Achr6P07390_001 Banana nucleus 25.64 33.59
GSMUA_Achr2P19760_001 Banana nucleus 26.11 33.53
GSMUA_Achr5P05010_001 Banana nucleus 33.33 32.84
GSMUA_AchrUn_... Banana nucleus 24.24 32.76
GSMUA_Achr10P... Banana nucleus 25.41 32.68
GSMUA_Achr10P... Banana nucleus 25.52 32.49
GSMUA_Achr6P01740_001 Banana nucleus 39.28 32.44
GSMUA_Achr6P29070_001 Banana nucleus, vacuole 26.22 32.28
GSMUA_Achr7P24330_001 Banana nucleus 24.83 31.98
GSMUA_Achr8P23850_001 Banana nucleus 39.74 31.96
GSMUA_Achr6P12780_001 Banana nucleus 25.76 31.75
GSMUA_Achr6P08090_001 Banana nucleus 28.32 29.49
GSMUA_Achr10P... Banana nucleus 27.39 28.52
GSMUA_Achr6P16450_001 Banana nucleus 28.09 27.61
GSMUA_AchrUn_... Banana nucleus 28.21 27.38
GSMUA_Achr8P13620_001 Banana nucleus 14.22 25.21
Protein Annotations
MapMan:15.5.5.1Gene3D:2.30.30.1040Gene3D:2.40.330.10Gene3D:3.10.20.90InterPro:AUX/IAA_domInterPro:Auxin_resp
InterPro:B3_DNA-bdInterPro:DNA-bd_pseudobarrel_sfGO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139
GO:GO:0006351GO:GO:0006355GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009719GO:GO:0009725GO:GO:0009734GO:GO:0009987EnsemblPlantsGene:GSMUA_Achr6G36980_001
EnsemblPlants:GSMUA_Achr6P36980_001EnsemblPlants:GSMUA_Achr6T36980_001InterPro:IPR000270InterPro:IPR003340InterPro:IPR015300UniProt:M0TDD8
InterPro:PB1_domPFAM:PF02309PFAM:PF02362PFAM:PF06507PFscan:PS50863PFscan:PS51745
PANTHER:PTHR31384PANTHER:PTHR31384:SF10SMART:SM01019SUPFAM:SSF101936SUPFAM:SSF54277UniParc:UPI0002952F93
Description
Putative Auxin response factor 5 [Source:GMGC_GENE;Acc:GSMUA_Achr6G36980_001]
Coordinates
chr6:+:34874048..34881709
Molecular Weight (calculated)
95349.1 Da
IEP (calculated)
5.147
GRAVY (calculated)
-0.462
Length
858 amino acids
Sequence
(BLAST)
001: MSSIQENVGP VGLNSAAVLQ DEMKLLGEAP SGRKVINSEL WHACAGSFVS LPQPGSLVYY FPQGHSEQVT ASTRKIANSQ IPAYTDLPSQ LMCQVHNVAL
101: HADKETDEIY AQMTLQPVNS ESDVLHIPDL GYTKCKHPTE IFCKILTASD TSTHGGFSVP RRAAEKLFPQ LDYSMQPPNQ ELIVRDLHDN LWTFRHIYRG
201: QPKRHLLTTG WSLFVGAKRL KAGDSILFIR KSLRRKDKLC SFPETNETCG MYRDEKSQLL LGIRRAFRKQ IAQPSSVLST DSMHIGVLAA AAHATSSRSP
301: FTVYYNPRAC PSDFVIPLTK YHKAAYTQVP IGMRFGMMIE TEESSKRRYM GTIVGISDCD PVKWPNSKWR NLQVEWDEHG YGERPDRVSL WEIETPESLF
401: AFPSITSSLK RQCLPGYVGP AINIQFGNLK PFPKPAKNGN PNSEHLIAGV GSENLLNILN KPTSHDGLLG CHQSIYSISP AEPEQKFQDH NTGNENGINL
501: RRTENASLDE SSAQQSEMDS VVLPIDPNKQ SDDMIKTISH DILAENLDQL PNHQNQSDPT GAQSPGLEAT QSSDVCNLNN LLPCQDYLHH NLDHDEWIPQ
601: HSYSLYLSAA ENAATFTSDI SSLAKPHSFE PIETYQLSCI SDSDTGQHCT TNIQEYLGTQ LNSLDDELLG MPNSCGTMDL SEESNTQSET IGNLHLDPSN
701: ESMDMGLIPS VTIEGLNSES SLQDIPDCSA GTSSGSIAAN DYRLYRGSRK QVCQQPLRTY TKVQKLGSVG RSIDVTRFSN YHELRSAVAC MFGLEGQLDD
801: ARGSEWKLVY VDYENDVLLV GDDPWEEFIN CVRCIRILSA SEVQQMSQEG MQVMEGLV
Best Arabidopsis Sequence Match ( AT1G19850.1 )
(BLAST)
001: MMASLSCVED KMKTSCLVNG GGTITTTTSQ STLLEEMKLL KDQSGTRKPV INSELWHACA GPLVCLPQVG SLVYYFSQGH SEQVAVSTRR SATTQVPNYP
101: NLPSQLMCQV HNVTLHADKD SDEIYAQMSL QPVHSERDVF PVPDFGMLRG SKHPTEFFCK TLTASDTSTH GGFSVPRRAA EKLFPPLDYS AQPPTQELVV
201: RDLHENTWTF RHIYRGQPKR HLLTTGWSLF VGSKRLRAGD SVLFIRDEKS QLMVGVRRAN RQQTALPSSV LSADSMHIGV LAAAAHATAN RTPFLIFYNP
301: RACPAEFVIP LAKYRKAICG SQLSVGMRFG MMFETEDSGK RRYMGTIVGI SDLDPLRWPG SKWRNLQVEW DEPGCNDKPT RVSPWDIETP ESLFIFPSLT
401: SGLKRQLHPS YFAGETEWGS LIKRPLIRVP DSANGIMPYA SFPSMASEQL MKMMMRPHNN QNVPSFMSEM QQNIVMGNGG LLGDMKMQQP LMMNQKSEMV
501: QPQNKLTVNP SASNTSGQEQ NLSQSMSAPA KPENSTLSGC SSGRVQHGLE QSMEQASQVT TSTVCNEEKV NQLLQKPGAS SPVQADQCLD ITHQIYQPQS
601: DPINGFSFLE TDELTSQVSS FQSLAGSYKQ PFILSSQDSS AVVLPDSTNS PLFHDVWDTQ LNGLKFDQFS PLMQQDLYAS QNICMSNSTT SNILDPPLSN
701: TVLDDFCAIK DTDFQNHPSG CLVGNNNTSF AQDVQSQITS ASFADSQAFS RQDFPDNSGG TGTSSSNVDF DDCSLRQNSK GSSWQKIATP RVRTYTKVQK
801: TGSVGRSIDV TSFKDYEELK SAIECMFGLE GLLTHPQSSG WKLVYVDYES DVLLVGDDPW EEFVGCVRCI RILSPTEVQQ MSEEGMKLLN SAGINDLKTS
901: VS
Arabidopsis Description
ARF5Auxin response factor [Source:UniProtKB/TrEMBL;Acc:A0A178W993]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.