Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES13038 | Sorghum | nucleus | 89.99 | 91.23 |
| Zm00001d001945_P002 | Maize | nucleus | 86.97 | 87.97 |
| TraesCS2D01G491200.2 | Wheat | nucleus | 77.37 | 77.7 |
| TraesCS2B01G519200.2 | Wheat | nucleus | 77.37 | 77.7 |
| TraesCS2A01G491000.1 | Wheat | nucleus | 77.27 | 77.59 |
| Os04t0664400-01 | Rice | nucleus | 74.04 | 77.17 |
| HORVU2Hr1G109650.18 | Barley | nucleus | 76.12 | 76.28 |
| Bra025775.1-P | Field mustard | nucleus | 33.37 | 68.09 |
| GSMUA_Achr1P20040_001 | Banana | nucleus | 44.42 | 54.48 |
| GSMUA_Achr6P36980_001 | Banana | nucleus | 45.99 | 51.4 |
| Bra016492.1-P | Field mustard | nucleus | 40.25 | 46.17 |
| CDX83741 | Canola | nucleus | 40.67 | 46.1 |
| CDY62586 | Canola | nucleus | 40.56 | 45.98 |
| CDY01393 | Canola | nucleus | 41.19 | 45.66 |
| CDY61164 | Canola | nucleus | 40.98 | 45.64 |
| Bra012190.1-P | Field mustard | nucleus | 41.19 | 45.56 |
| KRH17404 | Soybean | nucleus | 44.11 | 45.48 |
| CDY29392 | Canola | nucleus | 41.5 | 45.43 |
| KRH05923 | Soybean | nucleus | 44.0 | 45.23 |
| AT1G19850.1 | Thale cress | nucleus | 42.34 | 45.01 |
| CDY39348 | Canola | nucleus | 41.19 | 44.94 |
| VIT_18s0001g13930.t01 | Wine grape | nucleus | 44.42 | 44.7 |
| Solyc04g081240.2.1 | Tomato | nucleus | 42.44 | 43.76 |
| PGSC0003DMT400009660 | Potato | nucleus | 42.13 | 43.49 |
| GSMUA_Achr1P20000_001 | Banana | nucleus | 43.48 | 42.95 |
| Zm00001d001879_P036 | Maize | nucleus | 32.85 | 38.56 |
| GSMUA_Achr1P20010_001 | Banana | plasma membrane, plastid | 41.5 | 37.9 |
| Zm00001d031064_P003 | Maize | nucleus | 34.1 | 36.45 |
| Zm00001d014377_P002 | Maize | nucleus | 34.83 | 36.42 |
| Zm00001d041497_P005 | Maize | nucleus | 33.68 | 36.37 |
| Zm00001d050781_P001 | Maize | nucleus | 23.88 | 36.35 |
| Zm00001d053819_P002 | Maize | nucleus | 34.41 | 35.91 |
| Zm00001d026590_P003 | Maize | nucleus | 31.7 | 35.85 |
| Zm00001d036593_P001 | Maize | plastid | 34.83 | 34.79 |
| Zm00001d016838_P001 | Maize | nucleus | 24.09 | 32.86 |
| Zm00001d045026_P002 | Maize | nucleus | 35.98 | 32.76 |
| Zm00001d003601_P006 | Maize | nucleus | 22.94 | 32.26 |
| Zm00001d023659_P007 | Maize | nucleus | 25.44 | 29.54 |
| Zm00001d031522_P007 | Maize | nucleus | 33.37 | 29.47 |
| Zm00001d014690_P014 | Maize | nucleus | 36.08 | 28.98 |
| Zm00001d041056_P019 | Maize | nucleus | 25.44 | 28.91 |
| Zm00001d011953_P002 | Maize | nucleus | 24.09 | 28.66 |
| Zm00001d039267_P005 | Maize | nucleus | 20.65 | 28.61 |
| Zm00001d042267_P003 | Maize | nucleus | 24.19 | 28.36 |
| Zm00001d049295_P001 | Maize | nucleus | 25.86 | 28.31 |
| Zm00001d015243_P001 | Maize | nucleus | 30.66 | 26.92 |
| Zm00001d052637_P001 | Maize | mitochondrion | 0.94 | 10.98 |
Protein Annotations
| EntrezGene:103642166 | MapMan:15.5.5.1 | Gene3D:2.30.30.1040 | Gene3D:2.40.330.10 | Gene3D:3.10.20.90 | UniProt:A0A1D6JH51 |
| ProteinID:AQK46989.1 | ProteinID:AQK46990.1 | InterPro:AUX/IAA_dom | InterPro:Auxin_resp | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 |
| GO:GO:0009725 | GO:GO:0009734 | GO:GO:0009987 | InterPro:IPR000270 | InterPro:IPR003340 | InterPro:IPR015300 |
| InterPro:PB1_dom | PFAM:PF02309 | PFAM:PF02362 | PFAM:PF06507 | PFscan:PS50863 | PFscan:PS51745 |
| PANTHER:PTHR31384 | PANTHER:PTHR31384:SF10 | SMART:SM01019 | SUPFAM:SSF101936 | SUPFAM:SSF54277 | UniParc:UPI000843C910 |
| EnsemblPlantsGene:Zm00001d026540 | EnsemblPlants:Zm00001d026540_P002 | EnsemblPlants:Zm00001d026540_T002 | SEG:seg | : | : |
Description
ARF-transcription factor 29Auxin response factor 5
Coordinates
chr10:-:147919136..147925549
Molecular Weight (calculated)
105429.0 Da
IEP (calculated)
6.443
GRAVY (calculated)
-0.468
Length
959 amino acids
Sequence
(BLAST)
(BLAST)
001: MMASSQEKAT SGVLRNAAAL LDEMQLMGET QGAKKVINSE LWHACAGPLV CLPQRGSLVY YFPQGHSEQV AATTKKIPNS RIPNYPSLPP QLLCQVHNIT
101: LHADKETDEI YCQMTLQPLH SETDVFPIPT LGAYTKSKHP TEYFCKNLTA SDTSTHGGFS VPRRAAEKLF PQLVRASAQT RVFNPQDYSM QPPNQELIVR
201: DLHDNMWTFR HIYRGQPKRH LLTTGWSLFV GAKRLKAGDS VLFIRDEKSQ LLVGVRRATR QQPALSSSVL STDSMHIGVL AAAAHAASSG GSFTIYYNPR
301: TSPSPFVIPL ARYNKATYLQ PSVGMRFAMM FETEESSKRR CTGAIVGISD YDPMRWPNSK WRNLQVEWDE HGYGERPERV SIWDIETPEN MVFSSPLNSK
401: RQCLPSYGVP GLQIGSVNMS SIPRAQGNPI GNLQHMPGMG SELALLLLNQ SGQNIGSPIA CQQSSFSSII QNAKHSYFPP KTFGASTASM KQESMPSTEA
501: QPQLNALGIQ RSDRVSCEVQ TASDSNPAQE MSVKPRAPRS TDSHSSQSIS DQNSKGEPRT KTRRSKKSSY QKTISDKSEL CSVPSQICDD KKHGSEPRLA
601: DCEAEQATCG NNEESSGALT HGDFAGELQV QQQVEQHELL APPKIESSKS PDGGKSVSSF PNQGCIPQFF EGLDWMIPPS YYQDSNGIQS VTASDNIFNP
701: SEGIPSTMNA DALDAFQTSC LSECFPSSIQ EFIGSPDINT LAFMSPEMQQ LDAGSNLPST SNSYVQMSFS EESHSASLSG LHMEAIHINS SSCSQPLATG
801: SFDAGAFPKL SNIRECQPLP LQEIHTSSMG TPSCSMDAAA EYGTDRSAKQ MKPPVRTYTK VQKLGSVGRC IDVTRFRDYH ELRSAIACMF GLQGKLEHPG
901: SSDWKLVYVD YENDVLLVGD DPWEEFINCV RCIRILSPSE VQQMSENGVH VLNDCIQIA
101: LHADKETDEI YCQMTLQPLH SETDVFPIPT LGAYTKSKHP TEYFCKNLTA SDTSTHGGFS VPRRAAEKLF PQLVRASAQT RVFNPQDYSM QPPNQELIVR
201: DLHDNMWTFR HIYRGQPKRH LLTTGWSLFV GAKRLKAGDS VLFIRDEKSQ LLVGVRRATR QQPALSSSVL STDSMHIGVL AAAAHAASSG GSFTIYYNPR
301: TSPSPFVIPL ARYNKATYLQ PSVGMRFAMM FETEESSKRR CTGAIVGISD YDPMRWPNSK WRNLQVEWDE HGYGERPERV SIWDIETPEN MVFSSPLNSK
401: RQCLPSYGVP GLQIGSVNMS SIPRAQGNPI GNLQHMPGMG SELALLLLNQ SGQNIGSPIA CQQSSFSSII QNAKHSYFPP KTFGASTASM KQESMPSTEA
501: QPQLNALGIQ RSDRVSCEVQ TASDSNPAQE MSVKPRAPRS TDSHSSQSIS DQNSKGEPRT KTRRSKKSSY QKTISDKSEL CSVPSQICDD KKHGSEPRLA
601: DCEAEQATCG NNEESSGALT HGDFAGELQV QQQVEQHELL APPKIESSKS PDGGKSVSSF PNQGCIPQFF EGLDWMIPPS YYQDSNGIQS VTASDNIFNP
701: SEGIPSTMNA DALDAFQTSC LSECFPSSIQ EFIGSPDINT LAFMSPEMQQ LDAGSNLPST SNSYVQMSFS EESHSASLSG LHMEAIHINS SSCSQPLATG
801: SFDAGAFPKL SNIRECQPLP LQEIHTSSMG TPSCSMDAAA EYGTDRSAKQ MKPPVRTYTK VQKLGSVGRC IDVTRFRDYH ELRSAIACMF GLQGKLEHPG
901: SSDWKLVYVD YENDVLLVGD DPWEEFINCV RCIRILSPSE VQQMSENGVH VLNDCIQIA
001: MMASLSCVED KMKTSCLVNG GGTITTTTSQ STLLEEMKLL KDQSGTRKPV INSELWHACA GPLVCLPQVG SLVYYFSQGH SEQVAVSTRR SATTQVPNYP
101: NLPSQLMCQV HNVTLHADKD SDEIYAQMSL QPVHSERDVF PVPDFGMLRG SKHPTEFFCK TLTASDTSTH GGFSVPRRAA EKLFPPLDYS AQPPTQELVV
201: RDLHENTWTF RHIYRGQPKR HLLTTGWSLF VGSKRLRAGD SVLFIRDEKS QLMVGVRRAN RQQTALPSSV LSADSMHIGV LAAAAHATAN RTPFLIFYNP
301: RACPAEFVIP LAKYRKAICG SQLSVGMRFG MMFETEDSGK RRYMGTIVGI SDLDPLRWPG SKWRNLQVEW DEPGCNDKPT RVSPWDIETP ESLFIFPSLT
401: SGLKRQLHPS YFAGETEWGS LIKRPLIRVP DSANGIMPYA SFPSMASEQL MKMMMRPHNN QNVPSFMSEM QQNIVMGNGG LLGDMKMQQP LMMNQKSEMV
501: QPQNKLTVNP SASNTSGQEQ NLSQSMSAPA KPENSTLSGC SSGRVQHGLE QSMEQASQVT TSTVCNEEKV NQLLQKPGAS SPVQADQCLD ITHQIYQPQS
601: DPINGFSFLE TDELTSQVSS FQSLAGSYKQ PFILSSQDSS AVVLPDSTNS PLFHDVWDTQ LNGLKFDQFS PLMQQDLYAS QNICMSNSTT SNILDPPLSN
701: TVLDDFCAIK DTDFQNHPSG CLVGNNNTSF AQDVQSQITS ASFADSQAFS RQDFPDNSGG TGTSSSNVDF DDCSLRQNSK GSSWQKIATP RVRTYTKVQK
801: TGSVGRSIDV TSFKDYEELK SAIECMFGLE GLLTHPQSSG WKLVYVDYES DVLLVGDDPW EEFVGCVRCI RILSPTEVQQ MSEEGMKLLN SAGINDLKTS
901: VS
101: NLPSQLMCQV HNVTLHADKD SDEIYAQMSL QPVHSERDVF PVPDFGMLRG SKHPTEFFCK TLTASDTSTH GGFSVPRRAA EKLFPPLDYS AQPPTQELVV
201: RDLHENTWTF RHIYRGQPKR HLLTTGWSLF VGSKRLRAGD SVLFIRDEKS QLMVGVRRAN RQQTALPSSV LSADSMHIGV LAAAAHATAN RTPFLIFYNP
301: RACPAEFVIP LAKYRKAICG SQLSVGMRFG MMFETEDSGK RRYMGTIVGI SDLDPLRWPG SKWRNLQVEW DEPGCNDKPT RVSPWDIETP ESLFIFPSLT
401: SGLKRQLHPS YFAGETEWGS LIKRPLIRVP DSANGIMPYA SFPSMASEQL MKMMMRPHNN QNVPSFMSEM QQNIVMGNGG LLGDMKMQQP LMMNQKSEMV
501: QPQNKLTVNP SASNTSGQEQ NLSQSMSAPA KPENSTLSGC SSGRVQHGLE QSMEQASQVT TSTVCNEEKV NQLLQKPGAS SPVQADQCLD ITHQIYQPQS
601: DPINGFSFLE TDELTSQVSS FQSLAGSYKQ PFILSSQDSS AVVLPDSTNS PLFHDVWDTQ LNGLKFDQFS PLMQQDLYAS QNICMSNSTT SNILDPPLSN
701: TVLDDFCAIK DTDFQNHPSG CLVGNNNTSF AQDVQSQITS ASFADSQAFS RQDFPDNSGG TGTSSSNVDF DDCSLRQNSK GSSWQKIATP RVRTYTKVQK
801: TGSVGRSIDV TSFKDYEELK SAIECMFGLE GLLTHPQSSG WKLVYVDYES DVLLVGDDPW EEFVGCVRCI RILSPTEVQQ MSEEGMKLLN SAGINDLKTS
901: VS
Arabidopsis Description
ARF5Auxin response factor [Source:UniProtKB/TrEMBL;Acc:A0A178W993]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.