Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES02172 | Sorghum | nucleus | 86.42 | 86.92 |
| Os01t0236300-01 | Rice | nucleus | 71.68 | 70.96 |
| TraesCS3A01G159200.1 | Wheat | nucleus | 66.33 | 60.47 |
| TraesCS3B01G190100.1 | Wheat | nucleus | 66.19 | 60.42 |
| TraesCS3D01G166700.1 | Wheat | nucleus | 66.19 | 60.42 |
| HORVU3Hr1G032230.6 | Barley | nucleus, plastid | 66.76 | 57.75 |
| Bra014419.1-P | Field mustard | nucleus | 38.01 | 47.39 |
| CDY47607 | Canola | nucleus | 39.31 | 45.03 |
| CDX80025 | Canola | nucleus | 37.86 | 44.86 |
| Bra004530.1-P | Field mustard | nucleus | 37.86 | 44.86 |
| Bra013748.1-P | Field mustard | nucleus | 38.58 | 44.35 |
| VIT_02s0025g01740.t01 | Wine grape | nucleus | 43.5 | 44.13 |
| CDX95705 | Canola | nucleus | 34.68 | 44.04 |
| KRH00001 | Soybean | nucleus | 42.05 | 43.83 |
| AT2G46530.3 | Thale cress | endoplasmic reticulum, vacuole | 39.31 | 43.73 |
| AT3G61830.1 | Thale cress | nucleus | 38.01 | 43.69 |
| CDY03502 | Canola | nucleus | 37.72 | 43.5 |
| GSMUA_Achr10P... | Banana | nucleus | 41.91 | 43.48 |
| KRH49135 | Soybean | nucleus | 41.62 | 43.37 |
| GSMUA_Achr2P19760_001 | Banana | nucleus | 40.9 | 42.37 |
| VIT_15s0046g00290.t01 | Wine grape | nucleus | 42.92 | 42.31 |
| KRH65922 | Soybean | nucleus | 42.2 | 42.26 |
| CDY10978 | Canola | nucleus | 38.15 | 42.24 |
| AT4G23980.1 | Thale cress | nucleus | 38.87 | 42.16 |
| CDY50434 | Canola | nucleus | 37.86 | 41.92 |
| KRH75716 | Soybean | nucleus | 41.91 | 41.91 |
| Bra019255.1-P | Field mustard | nucleus | 37.72 | 41.89 |
| Zm00001d050781_P001 | Maize | nucleus | 37.72 | 41.43 |
| KRH68924 | Soybean | nucleus | 39.6 | 41.39 |
| Solyc08g082630.2.1 | Tomato | nucleus | 37.86 | 40.68 |
| PGSC0003DMT400031965 | Potato | nucleus | 38.29 | 40.46 |
| PGSC0003DMT400000345 | Potato | nucleus | 39.88 | 40.29 |
| KRH06451 | Soybean | nucleus | 41.62 | 40.22 |
| Solyc01g096070.2.1 | Tomato | nucleus | 39.74 | 39.91 |
| KRH47893 | Soybean | nucleus | 40.75 | 39.39 |
| Zm00001d003601_P006 | Maize | nucleus | 38.15 | 38.71 |
| Solyc08g008380.2.1 | Tomato | nucleus | 38.15 | 38.65 |
| Zm00001d016838_P001 | Maize | nucleus | 39.02 | 38.41 |
| AT1G34390.1 | Thale cress | nucleus | 31.79 | 36.79 |
| CDY69758 | Canola | nucleus | 22.11 | 36.78 |
| AT1G34310.1 | Thale cress | nucleus | 31.5 | 36.76 |
| AT1G35540.1 | Thale cress | nucleus | 31.65 | 36.2 |
| AT1G35240.1 | Thale cress | nucleus | 30.92 | 36.15 |
| Bra034234.1-P | Field mustard | nucleus | 28.03 | 35.86 |
| AT1G34410.1 | Thale cress | nucleus | 31.36 | 35.81 |
| CDY67714 | Canola | nucleus | 27.46 | 35.78 |
| CDY53570 | Canola | nucleus | 25.87 | 35.73 |
| CDY48583 | Canola | nucleus | 28.03 | 35.47 |
| AT1G35520.1 | Thale cress | nucleus | 30.35 | 35.41 |
| CDY21993 | Canola | nucleus | 27.89 | 35.41 |
| Bra027944.1-P | Field mustard | nucleus | 27.46 | 34.61 |
| CDY41720 | Canola | nucleus | 27.46 | 34.55 |
| CDX94748 | Canola | endoplasmic reticulum, vacuole | 18.35 | 34.32 |
| AT1G34170.3 | Thale cress | nucleus | 26.73 | 33.88 |
| CDX94777 | Canola | nucleus | 26.59 | 33.03 |
| CDY49005 | Canola | nucleus | 26.59 | 33.03 |
| CDY54111 | Canola | nucleus | 26.3 | 32.1 |
| Bra017362.1-P | Field mustard | nucleus | 24.86 | 31.85 |
| CDY36940 | Canola | nucleus | 25.43 | 31.77 |
| Bra018124.1-P | Field mustard | nucleus | 25.29 | 31.53 |
| CDY55738 | Canola | nucleus | 24.42 | 31.3 |
| CDY24168 | Canola | nucleus | 25.43 | 31.26 |
| Zm00001d011953_P002 | Maize | nucleus | 35.69 | 30.65 |
| Zm00001d042267_P003 | Maize | nucleus | 36.13 | 30.56 |
| Zm00001d023659_P007 | Maize | nucleus | 34.1 | 28.57 |
| Zm00001d041056_P019 | Maize | nucleus | 34.83 | 28.55 |
| Zm00001d049295_P001 | Maize | nucleus | 34.83 | 27.51 |
| CDX94484 | Canola | nucleus | 23.84 | 26.36 |
| Bra007632.1-P | Field mustard | nucleus | 38.01 | 24.93 |
| CDX94528 | Canola | nucleus | 22.83 | 23.62 |
| Zm00001d001879_P036 | Maize | nucleus | 27.6 | 23.38 |
| Zm00001d031064_P003 | Maize | nucleus | 28.76 | 22.19 |
| Zm00001d041497_P005 | Maize | nucleus | 28.32 | 22.07 |
| Zm00001d014377_P002 | Maize | nucleus | 28.76 | 21.7 |
| Zm00001d053819_P002 | Maize | nucleus | 28.03 | 21.11 |
| Zm00001d001945_P002 | Maize | nucleus | 28.9 | 21.1 |
| Zm00001d026590_P003 | Maize | nucleus | 25.72 | 20.99 |
| Zm00001d026540_P002 | Maize | nucleus | 28.61 | 20.65 |
| Zm00001d036593_P001 | Maize | plastid | 28.47 | 20.52 |
| Zm00001d045026_P002 | Maize | nucleus | 30.06 | 19.75 |
| CDY24162 | Canola | nucleus | 18.5 | 19.69 |
| Zm00001d031522_P007 | Maize | nucleus | 28.76 | 18.32 |
| Zm00001d014690_P014 | Maize | nucleus | 29.19 | 16.92 |
| Zm00001d015243_P001 | Maize | nucleus | 26.01 | 16.48 |
| Zm00001d052637_P001 | Maize | mitochondrion | 1.73 | 14.63 |
Protein Annotations
| EntrezGene:100857063 | MapMan:15.5.5.1 | Gene3D:2.30.30.1040 | Gene3D:2.40.330.10 | Gene3D:3.10.20.90 | UniProt:A0A1D6MEU8 |
| InterPro:AUX/IAA_dom | InterPro:Auxin_resp | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009725 | GO:GO:0009734 |
| GO:GO:0009987 | InterPro:IPR000270 | InterPro:IPR003340 | InterPro:IPR015300 | ProteinID:ONM28161.1 | ProteinID:ONM28167.1 |
| InterPro:PB1_dom | PFAM:PF02309 | PFAM:PF02362 | PFAM:PF06507 | PFscan:PS50863 | PFscan:PS51745 |
| PANTHER:PTHR31384 | PANTHER:PTHR31384:SF17 | SMART:SM01019 | SUPFAM:SSF101936 | UniParc:UPI0008427DFA | EnsemblPlantsGene:Zm00001d039267 |
| EnsemblPlants:Zm00001d039267_P005 | EnsemblPlants:Zm00001d039267_T005 | SEG:seg | : | : | : |
Description
ARF-transcription factor 7Auxin response factor 7
Coordinates
chr3:-:838392..842742
Molecular Weight (calculated)
77293.4 Da
IEP (calculated)
7.115
GRAVY (calculated)
-0.556
Length
692 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQGAGRDPE ELFEELWRAC AGPLVELPQT NERVFYFLQG HLEQLQEPTD PALLAEQIKM FQVPNKILCK VVNVELKARR DRNGRDVRPD HSAAGTRCKA
101: TSQVDLPQLP EPPLQETSRP VVHSFCKILT PSDTSTHGGF SVLRRHANEC LPALDMSMPT PTQELITKDL HGSEWRFKHI YRGQPRRHLL TTGWSTFVTS
201: KKLIAGDAFV YLRSETGQQR VGVRRLVQKQ STMPASVISS QSMHLGVLAS ASHAIRTHSI FLVYYRPRLS QSQYIVRLNK YLESSKIGFD VGMRFKMSFE
301: GDDVPIKKFS GTVVDKGDLS PQWQGSEWKT LKVKWDEATN LNGPERVSSW EIEPFDASAP AITMPVQPSM KNKRPRETAE GLDIHALEPA QEFWLSGRPE
401: QHEKTSVSSS EPKHQVAWTS ERAGYSAMSS SICQNSAVTG SWFKGFNSSG SHPSLPEISQ KLFQVTSNDA RVPPWPGLSA YHADEPSSKL SCNTALCSYQ
501: TEEVAPRFSN AVEEEKKEPG MFRLFGVNLI NHARSSATAD KTSVGAGETS ARAAGSFEDS AQLSRVTKDH THMVNGSPRE IQSHQSCSGR SRIKVQMHGN
601: DVCRAVDLGN LDGYEQLMGE VGEMFEIKDL GSKEKEEWKV TFINDENETM EVGAVPWQEF CQMVRKIVIH SIGDRGHMEA CPCLGQDGKR DY
101: TSQVDLPQLP EPPLQETSRP VVHSFCKILT PSDTSTHGGF SVLRRHANEC LPALDMSMPT PTQELITKDL HGSEWRFKHI YRGQPRRHLL TTGWSTFVTS
201: KKLIAGDAFV YLRSETGQQR VGVRRLVQKQ STMPASVISS QSMHLGVLAS ASHAIRTHSI FLVYYRPRLS QSQYIVRLNK YLESSKIGFD VGMRFKMSFE
301: GDDVPIKKFS GTVVDKGDLS PQWQGSEWKT LKVKWDEATN LNGPERVSSW EIEPFDASAP AITMPVQPSM KNKRPRETAE GLDIHALEPA QEFWLSGRPE
401: QHEKTSVSSS EPKHQVAWTS ERAGYSAMSS SICQNSAVTG SWFKGFNSSG SHPSLPEISQ KLFQVTSNDA RVPPWPGLSA YHADEPSSKL SCNTALCSYQ
501: TEEVAPRFSN AVEEEKKEPG MFRLFGVNLI NHARSSATAD KTSVGAGETS ARAAGSFEDS AQLSRVTKDH THMVNGSPRE IQSHQSCSGR SRIKVQMHGN
601: DVCRAVDLGN LDGYEQLMGE VGEMFEIKDL GSKEKEEWKV TFINDENETM EVGAVPWQEF CQMVRKIVIH SIGDRGHMEA CPCLGQDGKR DY
001: MAASNHSSGK PGGVLSDALC RELWHACAGP LVTLPREGER VYYFPEGHME QLEASMHQGL EQQMPSFNLP SKILCKVINI QRRAEPETDE VYAQITLLPE
101: LDQSEPTSPD APVQEPEKCT VHSFCKTLTA SDTSTHGGFS VLRRHADDCL PPLDMSQQPP WQELVATDLH NSEWHFRHIF RGQPRRHLLT TGWSVFVSSK
201: KLVAGDAFIF LRGENEELRV GVRRHMRQQT NIPSSVISSH SMHIGVLATA AHAITTGTIF SVFYKPRTSR SEFIVSVNRY LEAKTQKLSV GMRFKMRFEG
301: EEAPEKRFSG TIVGVQENKS SVWHDSEWRS LKVQWDEPSS VFRPERVSPW ELEPLVANST PSSQPQPPQR NKRPRPPGLP SPATGPSDGV WKSPADTPSS
401: VPLFSPPAKA ATFGHGGNKS FGVSIGSAFW PTNADSAAES FASAFNNEST EKKQTNGNVC RLFGFELVEN VNVDECFSAA SVSGAVAVDQ PVPSNEFDSG
501: QQSEPLNINQ SDIPSGSGDP EKSSLRSPQE SQSRQIRSCT KVHMQGSAVG RAIDLTRSEC YEDLFKKLEE MFDIKGELLE STKKWQVVYT DDEDDMMMVG
601: DDPWNEFCGM VRKIFIYTPE EVKKLSPKNK LAVNARMQLK ADAEENGNTE GRSSSMAGSR
101: LDQSEPTSPD APVQEPEKCT VHSFCKTLTA SDTSTHGGFS VLRRHADDCL PPLDMSQQPP WQELVATDLH NSEWHFRHIF RGQPRRHLLT TGWSVFVSSK
201: KLVAGDAFIF LRGENEELRV GVRRHMRQQT NIPSSVISSH SMHIGVLATA AHAITTGTIF SVFYKPRTSR SEFIVSVNRY LEAKTQKLSV GMRFKMRFEG
301: EEAPEKRFSG TIVGVQENKS SVWHDSEWRS LKVQWDEPSS VFRPERVSPW ELEPLVANST PSSQPQPPQR NKRPRPPGLP SPATGPSDGV WKSPADTPSS
401: VPLFSPPAKA ATFGHGGNKS FGVSIGSAFW PTNADSAAES FASAFNNEST EKKQTNGNVC RLFGFELVEN VNVDECFSAA SVSGAVAVDQ PVPSNEFDSG
501: QQSEPLNINQ SDIPSGSGDP EKSSLRSPQE SQSRQIRSCT KVHMQGSAVG RAIDLTRSEC YEDLFKKLEE MFDIKGELLE STKKWQVVYT DDEDDMMMVG
601: DDPWNEFCGM VRKIFIYTPE EVKKLSPKNK LAVNARMQLK ADAEENGNTE GRSSSMAGSR
Arabidopsis Description
ARF1Auxin response factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7G0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.