Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX80025 | Canola | nucleus | 82.39 | 76.88 |
| AT2G46530.3 | Thale cress | endoplasmic reticulum, vacuole | 83.67 | 73.31 |
| VIT_15s0046g00290.t01 | Wine grape | nucleus | 66.06 | 51.28 |
| CDY47607 | Canola | nucleus | 55.41 | 50.0 |
| PGSC0003DMT400000345 | Potato | nucleus | 60.92 | 48.47 |
| CDY10978 | Canola | nucleus | 55.23 | 48.16 |
| Solyc01g096070.2.1 | Tomato | nucleus | 60.73 | 48.04 |
| KRH68924 | Soybean | nucleus | 58.35 | 48.04 |
| CDY03502 | Canola | nucleus | 52.84 | 48.0 |
| GSMUA_AchrUn_... | Banana | nucleus | 55.41 | 47.56 |
| CDY50434 | Canola | nucleus | 54.5 | 47.52 |
| GSMUA_Achr10P... | Banana | nucleus | 56.15 | 45.88 |
| GSMUA_Achr7P24330_001 | Banana | nucleus | 55.23 | 45.2 |
| GSMUA_Achr2P19760_001 | Banana | nucleus | 55.23 | 45.06 |
| KRH47893 | Soybean | nucleus | 59.08 | 44.97 |
| KRH06451 | Soybean | nucleus | 58.17 | 44.27 |
| CDY27291 | Canola | nucleus | 50.28 | 44.26 |
| CDY33603 | Canola | nucleus | 50.46 | 41.6 |
| CDY65065 | Canola | nucleus | 50.46 | 41.6 |
| CDY67714 | Canola | nucleus | 37.98 | 38.98 |
| CDX94748 | Canola | endoplasmic reticulum, vacuole | 26.42 | 38.92 |
| CDY69758 | Canola | nucleus | 29.17 | 38.22 |
| CDY48583 | Canola | nucleus | 38.17 | 38.03 |
| CDY21993 | Canola | nucleus | 37.8 | 37.8 |
| Os01t0236300-01 | Rice | nucleus | 48.26 | 37.63 |
| EES02172 | Sorghum | nucleus | 46.79 | 37.06 |
| CDY53570 | Canola | nucleus | 33.95 | 36.93 |
| CDY41720 | Canola | nucleus | 37.06 | 36.73 |
| TraesCS3B01G190100.1 | Wheat | nucleus | 49.36 | 35.49 |
| TraesCS3A01G159200.1 | Wheat | nucleus | 49.36 | 35.44 |
| CDY36940 | Canola | nucleus | 35.96 | 35.38 |
| TraesCS3D01G166700.1 | Wheat | nucleus | 49.17 | 35.36 |
| CDY49005 | Canola | nucleus | 35.78 | 35.01 |
| Zm00001d039267_P005 | Maize | nucleus | 44.04 | 34.68 |
| CDX94777 | Canola | nucleus | 35.41 | 34.65 |
| CDX87230 | Canola | nucleus | 51.38 | 33.82 |
| CDY24168 | Canola | nucleus | 34.86 | 33.75 |
| CDY54111 | Canola | nucleus | 35.05 | 33.69 |
| HORVU3Hr1G032230.6 | Barley | nucleus, plastid | 48.99 | 33.38 |
| CDY67247 | Canola | nucleus | 51.56 | 33.02 |
| CDY00245 | Canola | nucleus | 51.38 | 32.9 |
| CDX86939 | Canola | nucleus | 51.19 | 32.82 |
| CDY55738 | Canola | nucleus | 32.48 | 32.78 |
| CDY16798 | Canola | nucleus | 51.19 | 31.81 |
| CDY31545 | Canola | nucleus | 38.53 | 27.74 |
| CDX94484 | Canola | nucleus | 31.74 | 27.64 |
| CDX80168 | Canola | nucleus | 38.35 | 27.54 |
| CDY39274 | Canola | nucleus | 37.98 | 26.57 |
| CDY07460 | Canola | nucleus | 37.8 | 26.38 |
| CDY53537 | Canola | nucleus | 38.17 | 25.55 |
| CDX74594 | Canola | nucleus | 38.17 | 25.4 |
| CDY12048 | Canola | nucleus | 39.45 | 25.38 |
| CDX94528 | Canola | nucleus | 31.01 | 25.26 |
| CDX90245 | Canola | nucleus | 39.27 | 25.12 |
| CDX83741 | Canola | nucleus | 38.17 | 24.59 |
| CDY02285 | Canola | nucleus | 39.27 | 24.51 |
| CDY09598 | Canola | nucleus | 39.08 | 24.48 |
| CDY61164 | Canola | nucleus | 38.53 | 24.39 |
| CDY62586 | Canola | nucleus | 37.8 | 24.35 |
| CDY01393 | Canola | nucleus | 38.53 | 24.28 |
| CDY24162 | Canola | nucleus | 28.81 | 24.15 |
| CDY29392 | Canola | nucleus | 38.17 | 23.74 |
| CDY39348 | Canola | nucleus | 37.98 | 23.55 |
| CDX96672 | Canola | nucleus | 37.25 | 19.9 |
| CDX92437 | Canola | nucleus | 37.61 | 19.71 |
| CDX83778 | Canola | nucleus | 36.7 | 19.61 |
| CDY16560 | Canola | nucleus | 37.25 | 19.48 |
| CDY26690 | Canola | nucleus | 37.43 | 19.45 |
| CDY41030 | Canola | nucleus | 37.25 | 19.19 |
| CDY45069 | Canola | nucleus | 37.8 | 18.51 |
Protein Annotations
| MapMan:15.5.5.1 | Gene3D:2.30.30.1040 | Gene3D:2.40.330.10 | Gene3D:3.10.20.90 | GO:A0A078E1S4 | InterPro:AUX/IAA_dom |
| InterPro:Auxin_resp | InterPro:B3_DNA-bd | EnsemblPlants:CDX95705 | ProteinID:CDX95705 | ProteinID:CDX95705.1 | InterPro:DNA-bd_pseudobarrel_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009725 |
| GO:GO:0009734 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00101601001 | InterPro:IPR000270 | InterPro:IPR003340 | InterPro:IPR015300 |
| InterPro:PB1_dom | PFAM:PF02309 | PFAM:PF02362 | PFAM:PF06507 | PFscan:PS50863 | PFscan:PS51745 |
| PANTHER:PTHR31384 | PANTHER:PTHR31384:SF17 | SMART:SM01019 | SUPFAM:SSF101936 | SUPFAM:SSF54277 | UniParc:UPI0004EDD1BB |
| SEG:seg | : | : | : | : | : |
Description
BnaC03g25860D
Coordinates
chrLK031890:+:754967..757724
Molecular Weight (calculated)
61355.3 Da
IEP (calculated)
6.738
GRAVY (calculated)
-0.371
Length
545 amino acids
Sequence
(BLAST)
(BLAST)
001: MANVEDDHLY MELWKACAGP LVEVPRYGER VFYFPQGHME QLVASTKQEG VVDQEIPDFN LPSKLLCRVL SVLLKAEHET DEVYAQITLQ PEEDQNEPES
101: LDPPVTEAAK QSVDSFVKIL TASDTSTHGG FSVLRKHATE CLPLLDMTQP TPTQELVARD LHGYEWRFKH IFRGQPRRHL LTTGWSTFVT SKRLIAGDAF
201: VFLRGKTGDL RVGVRRLARQ QSTMPASVIS SQSMNLGVLA TASHAVNTKT MFVVFYKPRI SQFIIGVNKY MSAMKSGFST GRRFRMRFEG EESPERVFTG
301: AIIGSGDISP QWQASKWRLL QIQWDEPSLL YKYLLPEITG SPVASNFLSS FPQSHEANPS LKLLFQDPPS GLQCKKTETS VTSCCRLFGF DLMSKPTTTP
401: SPLGKQVISM DSNNSASTKC QDLNSHQKQQ TSTRSRIKVQ MQGTAVGRAV DLTLLRSYDE LISELEKLFE IEGELRPKDK WAIVFTDNEG YMMLAGDDPW
501: NEFCKMAKKL FIYSSDEVKK MSSKSSLDDE GTIINLEPDQ RIANL
101: LDPPVTEAAK QSVDSFVKIL TASDTSTHGG FSVLRKHATE CLPLLDMTQP TPTQELVARD LHGYEWRFKH IFRGQPRRHL LTTGWSTFVT SKRLIAGDAF
201: VFLRGKTGDL RVGVRRLARQ QSTMPASVIS SQSMNLGVLA TASHAVNTKT MFVVFYKPRI SQFIIGVNKY MSAMKSGFST GRRFRMRFEG EESPERVFTG
301: AIIGSGDISP QWQASKWRLL QIQWDEPSLL YKYLLPEITG SPVASNFLSS FPQSHEANPS LKLLFQDPPS GLQCKKTETS VTSCCRLFGF DLMSKPTTTP
401: SPLGKQVISM DSNNSASTKC QDLNSHQKQQ TSTRSRIKVQ MQGTAVGRAV DLTLLRSYDE LISELEKLFE IEGELRPKDK WAIVFTDNEG YMMLAGDDPW
501: NEFCKMAKKL FIYSSDEVKK MSSKSSLDDE GTIINLEPDQ RIANL
001: MANVEADFRT SGSNDDELYT ELWKACAGPL VEVPRYGERV FYFPQGHMEQ LVASTNQGVV DQEIPVFNLP PKILCRVLSV TLKAEHETDE VYAQITLQPE
101: EDQSEPTSLD PPLVEPAKPT VDSFVKILTA SDTSTHGGFS VLRKHATECL PSLDMTQPTP TQELVARDLH GYEWRFKHIF RGQPRRHLLT TGWSTFVTSK
201: RLVAGDAFVF LRGETGDLRV GVRRLAKQQS TMPASVISSQ SMRLGVLATA SHAVTTTTIF VVFYKPRISQ FIISVNKYMM AMKNGFSLGM RYRMRFEGEE
301: SPERIFTGTI IGSGDLSSQW PASKWRSLQI QWDEPSSIQR PNKVSPWEIE PFSPSALTPT PTQQQSKSKR SRPISEITGS PVASSFLSSF SQSHESNPSV
401: KLLFQDPATE RNSNKSVFSS GLQCKITEAP VTSSCRLFGF DLTSKPASAT IPHDKQLISV DSNISDSTTK CQDPNSSNSP KEQKQQTSTR SRIKVQMQGT
501: AVGRAVDLTL LRSYDELIKE LEKMFEIEGE LSPKDKWAIV FTDDEGDRML VGDDPWNEFC KMAKKLFIYP SDEVKKMRSK SLLGDKGTIV NLESDQRTVH
601: V
101: EDQSEPTSLD PPLVEPAKPT VDSFVKILTA SDTSTHGGFS VLRKHATECL PSLDMTQPTP TQELVARDLH GYEWRFKHIF RGQPRRHLLT TGWSTFVTSK
201: RLVAGDAFVF LRGETGDLRV GVRRLAKQQS TMPASVISSQ SMRLGVLATA SHAVTTTTIF VVFYKPRISQ FIISVNKYMM AMKNGFSLGM RYRMRFEGEE
301: SPERIFTGTI IGSGDLSSQW PASKWRSLQI QWDEPSSIQR PNKVSPWEIE PFSPSALTPT PTQQQSKSKR SRPISEITGS PVASSFLSSF SQSHESNPSV
401: KLLFQDPATE RNSNKSVFSS GLQCKITEAP VTSSCRLFGF DLTSKPASAT IPHDKQLISV DSNISDSTTK CQDPNSSNSP KEQKQQTSTR SRIKVQMQGT
501: AVGRAVDLTL LRSYDELIKE LEKMFEIEGE LSPKDKWAIV FTDDEGDRML VGDDPWNEFC KMAKKLFIYP SDEVKKMRSK SLLGDKGTIV NLESDQRTVH
601: V
Arabidopsis Description
ARF11Auxin response factor 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPY6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.