Factsheet for AT2G46530.3

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

nucleus 2
extracellular 4
endoplasmic reticulum 5
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra004530.1-P	Field mustard	nucleus	80.55	85.79
CDX80025	Canola	nucleus	80.23	85.45
CDX95705	Canola	nucleus	73.31	83.67
AT3G61830.1	Thale cress	nucleus	69.94	72.26
VIT_15s0046g00290.t01	Wine grape	nucleus	62.38	55.27
KRH68924	Soybean	nucleus	56.43	53.02
PGSC0003DMT400000345	Potato	nucleus	57.72	52.41
Solyc01g096070.2.1	Tomato	nucleus	58.04	52.39
AT4G23980.1	Thale cress	nucleus	53.7	52.35
GSMUA_Achr10P...	Banana	nucleus	55.47	51.72
GSMUA_AchrUn_...	Banana	nucleus	52.25	51.18
GSMUA_Achr2P19760_001	Banana	nucleus	54.02	50.3
GSMUA_Achr7P24330_001	Banana	nucleus	53.38	49.85
KRH06451	Soybean	nucleus	56.11	48.74
KRH47893	Soybean	nucleus	55.63	48.32
AT1G59750.1	Thale cress	nucleus	48.71	45.56
Os01t0236300-01	Rice	nucleus	47.75	42.49
AT1G35240.1	Thale cress	nucleus	40.35	42.4
EES02172	Sorghum	nucleus	46.62	42.15
AT1G34390.1	Thale cress	nucleus	39.55	41.14
AT1G34410.1	Thale cress	nucleus	40.03	41.09
AT1G34310.1	Thale cress	nucleus	39.07	40.98
AT1G35540.1	Thale cress	nucleus	39.71	40.83
AT1G35520.1	Thale cress	nucleus	38.59	40.47
TraesCS3B01G190100.1	Wheat	nucleus	48.23	39.58
TraesCS3A01G159200.1	Wheat	nucleus	48.07	39.39
AT1G34170.3	Thale cress	nucleus	34.57	39.38
TraesCS3D01G166700.1	Wheat	nucleus	47.91	39.31
Zm00001d039267_P005	Maize	nucleus	43.73	39.31
HORVU3Hr1G032230.6	Barley	nucleus, plastid	47.91	37.25
AT5G62000.1	Thale cress	nucleus	48.71	35.27
AT5G60450.1	Thale cress	nucleus	36.33	28.68
AT5G37020.1	Thale cress	nucleus	36.33	27.87
AT1G19850.1	Thale cress	nucleus	35.69	24.61
AT1G30330.3	Thale cress	nucleus	36.5	24.28
AT1G19220.1	Thale cress	nucleus	35.85	20.53
AT5G20730.1	Thale cress	nucleus	35.53	18.97

Protein Annotations

MapMan:15.5.5.1	Gene3D:2.30.30.1040	Gene3D:2.40.330.10	Gene3D:3.10.20.90	EntrezGene:819264	ProteinID:AAD20164.1
ProteinID:AAM15267.1	ProteinID:AEC10714.1	ProteinID:AEC10715.1	ProteinID:AEC10716.1	EMBL:AK229757	EMBL:AK229924
Symbol:ARF11	ArrayExpress:AT2G46530	EnsemblPlantsGene:AT2G46530	RefSeq:AT2G46530	TAIR:AT2G46530	RefSeq:AT2G46530-TAIR-G
EnsemblPlants:AT2G46530.3	TAIR:AT2G46530.3	InterPro:AUX/IAA_dom	EMBL:AY669791	Unigene:At.36497	InterPro:Auxin_resp
InterPro:B3_DNA-bd	EMBL:BX837073	InterPro:DNA-bd_pseudobarrel_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009506	GO:GO:0009719	GO:GO:0009725
GO:GO:0009734	GO:GO:0009987	InterPro:IPR000270	InterPro:IPR003340	InterPro:IPR015300	RefSeq:NP_001031548.1
RefSeq:NP_182176.2	RefSeq:NP_973701.1	InterPro:PB1_dom	PFAM:PF02309	PFAM:PF02362	PFAM:PF06507
PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019
PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029
PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052
PO:PO:0020003	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0025022	PFscan:PS50863
PFscan:PS51745	PANTHER:PTHR31384	PANTHER:PTHR31384:SF17	UniProt:Q9ZPY6	SMART:SM01019	SUPFAM:SSF101936
SUPFAM:SSF54277	UniParc:UPI00000A3A2A	SEG:seg	:	:	:

Description

ARF11Auxin response factor 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPY6]

Coordinates

chr2:+:19105112..19108331

Molecular Weight (calculated)

69667.1 Da

IEP (calculated)

7.573

GRAVY (calculated)

-0.373

Length

622 amino acids

Sequence
(BLAST)

001: MSQTSLEPLI ISIIKLQILQ LWLKLIAVGW NLGSNDDELY TELWKACAGP LVEVPRYGER VFYFPQGHME QLVASTNQGV VDQEIPVFNL PPKILCRVLS
101: VTLKAEHETD EVYAQITLQP EEDQSEPTSL DPPLVEPAKP TVDSFVKILT ASDTSTHGGF SVLRKHATEC LPSLDMTQPT PTQELVARDL HGYEWRFKHI
201: FRGQPRRHLL TTGWSTFVTS KRLVAGDAFV FLRGETGDLR VGVRRLAKQQ STMPASVISS QSMRLGVLAT ASHAVTTTTI FVVFYKPRIS QFIISVNKYM
301: MAMKNGFSLG MRYRMRFEGE ESPERIFTGT IIGSGDLSSQ WPASKWRSLQ IQWDEPSSIQ RPNKVSPWEI EPFSPSALTP TPTQQQSKSK RSRPISEITG
401: SPVASSFLSS FSQSHESNPS VKLLFQDPAT ERNSNKSVFS SGLQCKITEA PVTSSCRLFG FDLTSKPASA TIPHDKQLIS VDSNISDSTT KCQDPNSSNS
501: PKEQKQQTST RSRIKVQMQG TAVGRAVDLT LLRSYDELIK ELEKMFEIEG ELSPKDKWAI VFTDDEGDRM LVGDDPWNEF CKMAKKLFIY PSDEVKKMRS
601: KSLLGDKGTI VNLESDQRTV HV

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.