Factsheet for AT5G37020.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74594	Canola	nucleus	92.72	91.82
CDY53537	Canola	nucleus	90.88	90.54
Bra028110.1-P	Field mustard	nucleus	92.85	89.22
GSMUA_Achr8P13630_001	Banana	cytosol, nucleus, plastid	28.24	76.59
KRH17251	Soybean	nucleus	70.41	67.73
KRH72896	Soybean	nucleus	70.53	67.53
KRH30740	Soybean	nucleus	70.04	67.3
KRG98044	Soybean	nucleus	69.3	66.83
Solyc02g037530.2.1	Tomato	nucleus	67.08	64.61
Solyc03g031970.2.1	Tomato	nucleus	67.2	64.57
GSMUA_Achr4P25960_001	Banana	nucleus	62.15	62.92
GSMUA_Achr11P...	Banana	nucleus	61.78	61.85
PGSC0003DMT400048034	Potato	nucleus	56.72	61.17
Zm00001d001879_P036	Maize	nucleus	59.43	59.0
KXG27404	Sorghum	nucleus	59.56	58.97
Os04t0671900-01	Rice	nucleus	59.19	58.68
GSMUA_AchrUn_...	Banana	mitochondrion	36.74	58.32
VIT_04s0079g00200.t01	Wine grape	nucleus	50.43	57.85
TraesCS2A01G547800.1	Wheat	nucleus	58.82	57.4
TraesCS2B01G578500.1	Wheat	nucleus	58.69	57.14
HORVU2Hr1G121110.32	Barley	nucleus	58.94	57.04
TraesCS2D01G548900.1	Wheat	nucleus	58.57	57.02
Zm00001d026590_P003	Maize	nucleus	56.1	53.66
AT1G30330.3	Thale cress	nucleus	60.17	52.19
GSMUA_Achr8P13620_001	Banana	nucleus	25.28	42.36
AT3G61830.1	Thale cress	nucleus	27.99	37.71
AT2G46530.3	Thale cress	endoplasmic reticulum, vacuole	27.87	36.33
AT1G59750.1	Thale cress	nucleus	29.72	36.24
AT4G23980.1	Thale cress	nucleus	28.48	36.21
AT1G19850.1	Thale cress	nucleus	38.47	34.59
AT1G19220.1	Thale cress	nucleus	45.62	34.07
AT1G34410.1	Thale cress	nucleus	25.15	33.66
AT1G34310.1	Thale cress	nucleus	24.54	33.56
AT1G35540.1	Thale cress	nucleus	25.03	33.55
AT1G35240.1	Thale cress	nucleus	24.41	33.45
AT1G35520.1	Thale cress	nucleus	24.41	33.39
AT1G34390.1	Thale cress	nucleus	24.41	33.11
AT1G34170.3	Thale cress	nucleus	21.82	32.42
AT5G20730.1	Thale cress	nucleus	45.13	31.42
AT5G60450.1	Thale cress	nucleus	30.46	31.35
AT5G62000.1	Thale cress	nucleus	32.18	30.38

Protein Annotations

MapMan:15.5.5.1	Gene3D:2.30.30.1040	Gene3D:2.40.330.10	Gene3D:3.10.20.90	EntrezGene:833672	UniProt:A0A178UFA9
ProteinID:AED94137.1	ProteinID:AED94138.1	EMBL:AF042196	Symbol:ARF8	ArrayExpress:AT5G37020	EnsemblPlantsGene:AT5G37020
RefSeq:AT5G37020	TAIR:AT5G37020	RefSeq:AT5G37020-TAIR-G	EnsemblPlants:AT5G37020.1	TAIR:AT5G37020.1	InterPro:AUX/IAA_dom
EMBL:AY669790	InterPro:Auxin_resp	InterPro:B3_DNA-bd	ProteinID:BAB08972.1	InterPro:DNA-bd_pseudobarrel_sf	GO:GO:0000003
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009719	GO:GO:0009725	GO:GO:0009733	GO:GO:0009734	GO:GO:0009791
GO:GO:0009908	GO:GO:0009987	GO:GO:0043565	InterPro:IPR000270	InterPro:IPR003340	InterPro:IPR015300
RefSeq:NP_001078672.1	RefSeq:NP_198518.1	ProteinID:OAO92463.1	InterPro:PB1_dom	PFAM:PF02309	PFAM:PF02362
PFAM:PF06507	PO:PO:0000013	PO:PO:0000018	PO:PO:0000037	PO:PO:0000052	PO:PO:0000084
PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185
PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115
PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006
PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020001	PO:PO:0020003
PO:PO:0020006	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020102	PO:PO:0020137
PO:PO:0025022	PO:PO:0025074	PO:PO:0025166	PO:PO:0025281	PFscan:PS50863	PFscan:PS51745
PANTHER:PTHR31384	PANTHER:PTHR31384:SF2	UniProt:Q9FGV1	SMART:SM01019	SUPFAM:SSF101936	SUPFAM:SSF54277
UniParc:UPI000009F68A	SEG:seg	:	:	:	:

Description

ARF8Auxin response factor [Source:UniProtKB/TrEMBL;Acc:A0A178UFA9]

Coordinates

chr5:+:14629453..14634454

Molecular Weight (calculated)

90153.1 Da

IEP (calculated)

6.309

GRAVY (calculated)

-0.486

Length

811 amino acids

Sequence
(BLAST)

001: MKLSTSGLGQ QGHEGEKCLN SELWHACAGP LVSLPSSGSR VVYFPQGHSE QVAATTNKEV DGHIPNYPSL PPQLICQLHN VTMHADVETD EVYAQMTLQP
101: LTPEEQKETF VPIELGIPSK QPSNYFCKTL TASDTSTHGG FSVPRRAAEK VFPPLDYTLQ PPAQELIARD LHDVEWKFRH IFRGQPKRHL LTTGWSVFVS
201: AKRLVAGDSV IFIRNEKNQL FLGIRHATRP QTIVPSSVLS SDSMHIGLLA AAAHASATNS CFTVFFHPRA SQSEFVIQLS KYIKAVFHTR ISVGMRFRML
301: FETEESSVRR YMGTITGISD LDSVRWPNSH WRSVKVGWDE STAGERQPRV SLWEIEPLTT FPMYPSLFPL RLKRPWHAGT SSLPDGRGDL GSGLTWLRGG
401: GGEQQGLLPL NYPSVGLFPW MQQRLDLSQM GTDNNQQYQA MLAAGLQNIG GGDPLRQQFV QLQEPHHQYL QQSASHNSDL MLQQQQQQQA SRHLMHAQTQ
501: IMSENLPQQN MRQEVSNQPA GQQQQLQQPD QNAYLNAFKM QNGHLQQWQQ QSEMPSPSFM KSDFTDSSNK FATTASPASG DGNLLNFSIT GQSVLPEQLT
601: TEGWSPKASN TFSEPLSLPQ AYPGKSLALE PGNPQNPSLF GVDPDSGLFL PSTVPRFASS SGDAEASPMS LTDSGFQNSL YSCMQDTTHE LLHGAGQINS
701: SNQTKNFVKV YKSGSVGRSL DISRFSSYHE LREELGKMFA IEGLLEDPLR SGWQLVFVDK ENDILLLGDD PWESFVNNVW YIKILSPEDV HQMGDHGEGS
801: GGLFPQNPTH L

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.