Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004530.1-P | Field mustard | nucleus | 98.97 | 98.97 |
| CDX95705 | Canola | nucleus | 76.88 | 82.39 |
| AT2G46530.3 | Thale cress | endoplasmic reticulum, vacuole | 85.45 | 80.23 |
| CDY47607 | Canola | nucleus | 57.19 | 55.3 |
| VIT_15s0046g00290.t01 | Wine grape | nucleus | 65.92 | 54.84 |
| CDY10978 | Canola | nucleus | 57.02 | 53.28 |
| KRH68924 | Soybean | nucleus | 60.1 | 53.02 |
| CDY03502 | Canola | nucleus | 54.28 | 52.83 |
| CDY50434 | Canola | nucleus | 56.51 | 52.8 |
| PGSC0003DMT400000345 | Potato | nucleus | 61.13 | 52.12 |
| Solyc01g096070.2.1 | Tomato | nucleus | 60.79 | 51.52 |
| GSMUA_Achr10P... | Banana | nucleus | 58.73 | 51.42 |
| GSMUA_AchrUn_... | Banana | nucleus | 55.82 | 51.34 |
| GSMUA_Achr2P19760_001 | Banana | nucleus | 57.36 | 50.15 |
| GSMUA_Achr7P24330_001 | Banana | nucleus | 56.68 | 49.7 |
| KRH06451 | Soybean | nucleus | 60.45 | 49.3 |
| KRH47893 | Soybean | nucleus | 59.76 | 48.74 |
| CDY27291 | Canola | nucleus | 51.54 | 48.63 |
| CDY65065 | Canola | nucleus | 51.2 | 45.23 |
| CDY33603 | Canola | nucleus | 51.2 | 45.23 |
| CDY69758 | Canola | nucleus | 30.99 | 43.51 |
| CDY67714 | Canola | nucleus | 39.21 | 43.13 |
| Os01t0236300-01 | Rice | nucleus | 50.17 | 41.92 |
| CDY48583 | Canola | nucleus | 39.04 | 41.68 |
| CDY21993 | Canola | nucleus | 38.87 | 41.65 |
| EES02172 | Sorghum | nucleus | 48.46 | 41.13 |
| CDY53570 | Canola | nucleus | 34.93 | 40.72 |
| CDY41720 | Canola | nucleus | 37.33 | 39.64 |
| CDX94748 | Canola | endoplasmic reticulum, vacuole | 24.66 | 38.92 |
| TraesCS3B01G190100.1 | Wheat | nucleus | 50.17 | 38.65 |
| TraesCS3A01G159200.1 | Wheat | nucleus | 50.17 | 38.6 |
| CDY49005 | Canola | nucleus | 36.82 | 38.6 |
| TraesCS3D01G166700.1 | Wheat | nucleus | 50.0 | 38.52 |
| CDY36940 | Canola | nucleus | 36.3 | 38.27 |
| CDX94777 | Canola | nucleus | 36.3 | 38.06 |
| Zm00001d039267_P005 | Maize | nucleus | 44.86 | 37.86 |
| CDY24168 | Canola | nucleus | 35.96 | 37.3 |
| CDX87230 | Canola | nucleus | 52.4 | 36.96 |
| CDY54111 | Canola | nucleus | 35.79 | 36.86 |
| CDY55738 | Canola | nucleus | 33.73 | 36.48 |
| HORVU3Hr1G032230.6 | Barley | nucleus, plastid | 49.83 | 36.38 |
| CDY00245 | Canola | nucleus | 52.57 | 36.08 |
| CDX86939 | Canola | nucleus | 52.4 | 36.0 |
| CDY67247 | Canola | nucleus | 52.23 | 35.84 |
| CDY16798 | Canola | nucleus | 52.23 | 34.78 |
| CDX94484 | Canola | nucleus | 33.05 | 30.83 |
| CDY31545 | Canola | nucleus | 38.87 | 29.99 |
| CDX80168 | Canola | nucleus | 38.7 | 29.78 |
| CDY39274 | Canola | nucleus | 38.7 | 29.01 |
| CDY07460 | Canola | nucleus | 38.53 | 28.81 |
| CDY53537 | Canola | nucleus | 39.21 | 28.13 |
| CDX74594 | Canola | nucleus | 39.38 | 28.08 |
| CDY12048 | Canola | nucleus | 40.24 | 27.75 |
| CDX94528 | Canola | nucleus | 31.51 | 27.5 |
| CDX90245 | Canola | nucleus | 40.07 | 27.46 |
| CDY09598 | Canola | nucleus | 39.9 | 26.78 |
| CDY02285 | Canola | nucleus | 39.9 | 26.69 |
| CDX83741 | Canola | nucleus | 37.84 | 26.12 |
| CDY62586 | Canola | nucleus | 37.84 | 26.12 |
| CDY61164 | Canola | nucleus | 38.18 | 25.9 |
| CDY01393 | Canola | nucleus | 38.01 | 25.66 |
| CDY29392 | Canola | nucleus | 37.84 | 25.23 |
| CDY39348 | Canola | nucleus | 37.67 | 25.03 |
| CDY24162 | Canola | nucleus | 26.88 | 24.15 |
| CDX96672 | Canola | nucleus | 37.84 | 21.67 |
| CDX83778 | Canola | nucleus | 37.67 | 21.57 |
| CDX92437 | Canola | nucleus | 37.84 | 21.25 |
| CDY26690 | Canola | nucleus | 38.01 | 21.16 |
| CDY16560 | Canola | nucleus | 37.33 | 20.92 |
| CDY41030 | Canola | nucleus | 37.84 | 20.89 |
| CDY45069 | Canola | nucleus | 37.84 | 19.86 |
Protein Annotations
| MapMan:15.5.5.1 | Gene3D:2.30.30.1040 | Gene3D:2.40.330.10 | Gene3D:3.10.20.90 | GO:A0A078CT97 | InterPro:AUX/IAA_dom |
| InterPro:Auxin_resp | InterPro:B3_DNA-bd | EnsemblPlants:CDX80025 | ProteinID:CDX80025 | ProteinID:CDX80025.1 | ncoils:Coil |
| InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009719 | GO:GO:0009725 | GO:GO:0009734 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00132904001 | InterPro:IPR000270 |
| InterPro:IPR003340 | InterPro:IPR015300 | InterPro:PB1_dom | PFAM:PF02309 | PFAM:PF02362 | PFAM:PF06507 |
| PFscan:PS50863 | PFscan:PS51745 | PANTHER:PTHR31384 | PANTHER:PTHR31384:SF17 | SMART:SM01019 | SUPFAM:SSF101936 |
| SUPFAM:SSF54277 | UniParc:UPI0004EDCC4C | SEG:seg | : | : | : |
Description
BnaA05g01310D
Coordinates
chrLK031819:+:1377795..1380859
Molecular Weight (calculated)
65840.4 Da
IEP (calculated)
6.987
GRAVY (calculated)
-0.482
Length
584 amino acids
Sequence
(BLAST)
(BLAST)
001: MENVVDDQLY MELWKACAGP LVEVPRYDER VFYFPQGHME QLVASTNQRV VDKDIPVFNL PPKILCRVLN VMLKAEHETD EVYAQITLQP EEDQSEPTSL
101: DPPLTEPAKQ TVDSFVKILT ASDTSTHGGF SVLRKHATEC LPPLDMTQAT PTQELVARDL HGYEWRFKHI FRGQPRRHLL TTGWSTFVTS KRLVAGDAFV
201: FLRGHQTGDL RVGVRRLAKQ QSTMPASVIS SQSMHLGVLA TASHAFNTTT MFVVLYKPRI SQFIISVNKY MAAMKKGFGI GMRFRMRFEG EESPERIFTG
301: TIVGTGDLSP QWPASKWRSL QVQWDESSTV QRPNKVSPWE IEPFLPSTLT TSPTQPHSKS KRSRPIDSSV LEITGSPVAS NFLSSFPKIH EPSPSLKLLF
401: QDPSSERNSN KTEAPATSCC RLFGFDLKSK PASAPNPNDK QQLISVDSNN TGSAKCQDPN SSKDQKQQTS STRSRTKVQM QGTAVGRAVD LTLLRSYDEL
501: IRELEKMFEI EGELRTKDKW AIVFTDDEGD MMLVGDDPWD EFCKMAKKLF IYSSDEVKQM SSKSLLDDEC TMVHLEPDQR TVKL
101: DPPLTEPAKQ TVDSFVKILT ASDTSTHGGF SVLRKHATEC LPPLDMTQAT PTQELVARDL HGYEWRFKHI FRGQPRRHLL TTGWSTFVTS KRLVAGDAFV
201: FLRGHQTGDL RVGVRRLAKQ QSTMPASVIS SQSMHLGVLA TASHAFNTTT MFVVLYKPRI SQFIISVNKY MAAMKKGFGI GMRFRMRFEG EESPERIFTG
301: TIVGTGDLSP QWPASKWRSL QVQWDESSTV QRPNKVSPWE IEPFLPSTLT TSPTQPHSKS KRSRPIDSSV LEITGSPVAS NFLSSFPKIH EPSPSLKLLF
401: QDPSSERNSN KTEAPATSCC RLFGFDLKSK PASAPNPNDK QQLISVDSNN TGSAKCQDPN SSKDQKQQTS STRSRTKVQM QGTAVGRAVD LTLLRSYDEL
501: IRELEKMFEI EGELRTKDKW AIVFTDDEGD MMLVGDDPWD EFCKMAKKLF IYSSDEVKQM SSKSLLDDEC TMVHLEPDQR TVKL
001: MSQTSLEPLI ISIIKLQILQ LWLKLIAVGW NLGSNDDELY TELWKACAGP LVEVPRYGER VFYFPQGHME QLVASTNQGV VDQEIPVFNL PPKILCRVLS
101: VTLKAEHETD EVYAQITLQP EEDQSEPTSL DPPLVEPAKP TVDSFVKILT ASDTSTHGGF SVLRKHATEC LPSLDMTQPT PTQELVARDL HGYEWRFKHI
201: FRGQPRRHLL TTGWSTFVTS KRLVAGDAFV FLRGETGDLR VGVRRLAKQQ STMPASVISS QSMRLGVLAT ASHAVTTTTI FVVFYKPRIS QFIISVNKYM
301: MAMKNGFSLG MRYRMRFEGE ESPERIFTGT IIGSGDLSSQ WPASKWRSLQ IQWDEPSSIQ RPNKVSPWEI EPFSPSALTP TPTQQQSKSK RSRPISEITG
401: SPVASSFLSS FSQSHESNPS VKLLFQDPAT ERNSNKSVFS SGLQCKITEA PVTSSCRLFG FDLTSKPASA TIPHDKQLIS VDSNISDSTT KCQDPNSSNS
501: PKEQKQQTST RSRIKVQMQG TAVGRAVDLT LLRSYDELIK ELEKMFEIEG ELSPKDKWAI VFTDDEGDRM LVGDDPWNEF CKMAKKLFIY PSDEVKKMRS
601: KSLLGDKGTI VNLESDQRTV HV
101: VTLKAEHETD EVYAQITLQP EEDQSEPTSL DPPLVEPAKP TVDSFVKILT ASDTSTHGGF SVLRKHATEC LPSLDMTQPT PTQELVARDL HGYEWRFKHI
201: FRGQPRRHLL TTGWSTFVTS KRLVAGDAFV FLRGETGDLR VGVRRLAKQQ STMPASVISS QSMRLGVLAT ASHAVTTTTI FVVFYKPRIS QFIISVNKYM
301: MAMKNGFSLG MRYRMRFEGE ESPERIFTGT IIGSGDLSSQ WPASKWRSLQ IQWDEPSSIQ RPNKVSPWEI EPFSPSALTP TPTQQQSKSK RSRPISEITG
401: SPVASSFLSS FSQSHESNPS VKLLFQDPAT ERNSNKSVFS SGLQCKITEA PVTSSCRLFG FDLTSKPASA TIPHDKQLIS VDSNISDSTT KCQDPNSSNS
501: PKEQKQQTST RSRIKVQMQG TAVGRAVDLT LLRSYDELIK ELEKMFEIEG ELSPKDKWAI VFTDDEGDRM LVGDDPWNEF CKMAKKLFIY PSDEVKKMRS
601: KSLLGDKGTI VNLESDQRTV HV
Arabidopsis Description
ARF11Auxin response factor 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPY6]
SUBAcon: [endoplasmic reticulum,vacuole]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.