Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY09598 | Canola | nucleus | 96.22 | 96.55 |
| CDX90245 | Canola | nucleus | 89.23 | 91.43 |
| CDY12048 | Canola | nucleus | 88.32 | 91.03 |
| KRH58711 | Soybean | nucleus | 40.78 | 90.59 |
| AT1G30330.3 | Thale cress | nucleus | 95.3 | 88.98 |
| VIT_10s0003g04100.t01 | Wine grape | nucleus | 75.94 | 73.02 |
| KRH21113 | Soybean | nucleus | 74.11 | 72.21 |
| KRH11131 | Soybean | nucleus | 73.65 | 71.6 |
| GSMUA_Achr5P02450_001 | Banana | nucleus | 65.86 | 69.44 |
| KRH42603 | Soybean | nucleus | 71.36 | 68.84 |
| GSMUA_Achr3P23290_001 | Banana | nucleus | 63.8 | 67.93 |
| GSMUA_Achr5P26580_001 | Banana | nucleus | 62.08 | 67.16 |
| GSMUA_Achr5P00590_001 | Banana | nucleus | 67.24 | 64.58 |
| GSMUA_Achr11P... | Banana | nucleus | 61.28 | 64.54 |
| GSMUA_Achr11P... | Banana | nucleus | 66.55 | 63.64 |
| GSMUA_Achr6P19850_001 | Banana | nucleus | 62.31 | 63.63 |
| TraesCS7B01G363100.1 | Wheat | nucleus | 65.98 | 63.37 |
| TraesCS7A01G461700.1 | Wheat | nucleus | 65.98 | 63.37 |
| TraesCS7D01G449900.2 | Wheat | nucleus | 65.75 | 63.22 |
| Os02t0164900-01 | Rice | nucleus | 65.29 | 62.78 |
| EER90218 | Sorghum | nucleus | 65.98 | 62.68 |
| Os06t0677800-01 | Rice | nucleus | 65.52 | 62.38 |
| Zm00001d014377_P002 | Maize | nucleus | 65.41 | 62.27 |
| EES04575 | Sorghum | nucleus | 64.72 | 62.02 |
| EES17392 | Sorghum | nucleus | 63.12 | 61.56 |
| HORVU7Hr1G106280.1 | Barley | nucleus | 65.98 | 61.41 |
| Zm00001d041497_P005 | Maize | nucleus | 62.31 | 61.26 |
| Zm00001d031064_P003 | Maize | nucleus | 62.89 | 61.2 |
| TraesCS6B01G167100.1 | Wheat | nucleus | 64.38 | 60.63 |
| TraesCS6D01G127600.2 | Wheat | nucleus | 64.38 | 60.63 |
| Zm00001d053819_P002 | Maize | nucleus | 63.69 | 60.5 |
| TraesCS6A01G138600.4 | Wheat | nucleus | 64.26 | 60.45 |
| Os12t0613700-01 | Rice | nucleus | 62.2 | 60.4 |
| HORVU6Hr1G026730.9 | Barley | nucleus | 63.8 | 59.96 |
| HORVU5Hr1G009650.20 | Barley | nucleus | 60.71 | 59.48 |
| TraesCS5B01G039800.1 | Wheat | nucleus | 60.71 | 59.48 |
| CDY07460 | Canola | nucleus | 53.15 | 59.41 |
| CDY53537 | Canola | nucleus | 55.21 | 59.21 |
| CDY39274 | Canola | nucleus | 52.81 | 59.18 |
| TraesCS5A01G038300.2 | Wheat | nucleus | 60.82 | 59.07 |
| TraesCS5D01G045700.2 | Wheat | nucleus | 60.71 | 58.89 |
| CDX74594 | Canola | nucleus | 55.21 | 58.85 |
| Zm00001d036593_P001 | Maize | plastid | 64.49 | 58.65 |
| CDX80025 | Canola | nucleus | 26.69 | 39.9 |
| CDY62586 | Canola | nucleus | 38.14 | 39.36 |
| CDX83741 | Canola | nucleus | 38.14 | 39.36 |
| CDX95705 | Canola | nucleus | 24.51 | 39.27 |
| CDY61164 | Canola | nucleus | 38.37 | 38.91 |
| CDY01393 | Canola | nucleus | 38.37 | 38.73 |
| CDY29392 | Canola | nucleus | 38.6 | 38.47 |
| CDY27291 | Canola | nucleus | 27.15 | 38.29 |
| CDY39348 | Canola | nucleus | 38.37 | 38.11 |
| CDX96672 | Canola | nucleus | 44.22 | 37.84 |
| CDX83778 | Canola | nucleus | 44.1 | 37.75 |
| CDY26690 | Canola | nucleus | 45.25 | 37.65 |
| CDY41030 | Canola | nucleus | 45.36 | 37.43 |
| CDY47607 | Canola | nucleus | 25.89 | 37.42 |
| CDY10978 | Canola | nucleus | 26.69 | 37.28 |
| CDX92437 | Canola | nucleus | 43.87 | 36.83 |
| CDY50434 | Canola | nucleus | 26.35 | 36.8 |
| CDY65065 | Canola | nucleus | 27.49 | 36.31 |
| CDY33603 | Canola | nucleus | 27.38 | 36.16 |
| CDY03502 | Canola | nucleus | 24.74 | 36.0 |
| CDY16560 | Canola | nucleus | 42.73 | 35.8 |
| CDY69758 | Canola | nucleus | 16.95 | 35.58 |
| CDY67714 | Canola | nucleus | 21.42 | 35.22 |
| CDY48583 | Canola | nucleus | 21.88 | 34.92 |
| CDY21993 | Canola | nucleus | 21.76 | 34.86 |
| CDY45069 | Canola | nucleus | 43.87 | 34.41 |
| CDX86939 | Canola | nucleus | 31.96 | 32.82 |
| CDX87230 | Canola | nucleus | 31.04 | 32.73 |
| CDY41720 | Canola | nucleus | 20.62 | 32.73 |
| CDY00245 | Canola | nucleus | 31.84 | 32.67 |
| CDY53570 | Canola | nucleus | 18.67 | 32.53 |
| CDY31545 | Canola | nucleus | 28.18 | 32.5 |
| CDY67247 | Canola | nucleus | 31.5 | 32.31 |
| CDX80168 | Canola | nucleus | 27.95 | 32.15 |
| CDX94748 | Canola | endoplasmic reticulum, vacuole | 13.4 | 31.62 |
| CDX94777 | Canola | nucleus | 20.16 | 31.6 |
| CDY49005 | Canola | nucleus | 19.93 | 31.24 |
| CDY16798 | Canola | nucleus | 31.27 | 31.13 |
| CDY36940 | Canola | nucleus | 19.7 | 31.05 |
| CDY24168 | Canola | nucleus | 19.47 | 30.2 |
| CDY55738 | Canola | nucleus | 18.67 | 30.19 |
| CDY54111 | Canola | nucleus | 19.36 | 29.81 |
| CDX94484 | Canola | nucleus | 19.01 | 26.52 |
| CDX94528 | Canola | nucleus | 17.87 | 23.32 |
| CDY24162 | Canola | nucleus | 14.66 | 19.69 |
Protein Annotations
| MapMan:15.5.5.1 | Gene3D:2.30.30.1040 | Gene3D:2.40.330.10 | Gene3D:3.10.20.90 | GO:A0A078EJN7 | InterPro:AUX/IAA_dom |
| InterPro:Auxin_resp | InterPro:B3_DNA-bd | EnsemblPlants:CDY02285 | ProteinID:CDY02285 | ProteinID:CDY02285.1 | ncoils:Coil |
| InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 |
| GO:GO:0009725 | GO:GO:0009734 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00113721001 | InterPro:IPR000270 | InterPro:IPR003340 |
| InterPro:IPR015300 | InterPro:PB1_dom | PFAM:PF02309 | PFAM:PF02362 | PFAM:PF06507 | PFscan:PS50863 |
| PFscan:PS51745 | PANTHER:PTHR31384 | PANTHER:PTHR31384:SF68 | SMART:SM01019 | SUPFAM:SSF101936 | SUPFAM:SSF54277 |
| UniParc:UPI0004EEA755 | SEG:seg | : | : | : | : |
Description
BnaA09g26170D
Coordinates
chrLK031933:-:4260..8283
Molecular Weight (calculated)
96070.0 Da
IEP (calculated)
6.236
GRAVY (calculated)
-0.452
Length
873 amino acids
Sequence
(BLAST)
(BLAST)
001: MRLSTAGFNP QPHEVTGEKR VLNSELWHAC AGPLVSLPPV GSRVVYFPQG HSEQVAASTN KEVDAHIPNY PSLHPQLICQ LHNVTMHADV ETDEVYAQMT
101: LQPLNAQEQK DPYLPAELGV PSRQPTNYFC KTLTASDTST HGGFSVPRRA AEKVFPPLDY SQQPPAQELM ARDLHDNEWK FRHIFRGQPK RHLLTTGWSV
201: FVSAKRLVAG DSVLFIWNDK NQLLLGIRRA NRPQTVMPSS VLSSDSMHLG LLAAAAHAAA TNSRFTIFYN PRASPSEFVI PLAKYVKAVY HTRVSVGMRF
301: RMLFETEESS VRRYMGTITG ICDLDPTRWA NSHWRSVKVG WDESTAGERQ PRVSLWEIEP LTTFPMYPSP FPLRLKRPWP PGLPSFHEDD MSMGMGMSSP
401: LMWDRGLQSL NFQGMGVNPW MQPRLDASGL LGMQNDVYQA MAAAALQDMR GIDPAKAAAS LLQFQNPSGF SMQPPSLMQP QMLQQQLSQQ QQQQQQLSQQ
501: QQQQSYLPSA STAAAVSAMS QFGSASQSMT SLCQQQSFLD TNGGNNNPMS PLHTLLSNFS QDESSQLLNL TRTTNSAAMT SSGWPSKRPA VDLSSFGNNS
601: NTQSVIEQLG QSHNTSNVPP NAVSLPPFPG GGRECSIEQE GGSPSDPHSH LLFGVNIDSS SLLMPNGMSN LRSIGIEGGD STTLPFTTSN FNNDFSGGNL
701: AMTTPSSCID EPGFLQSSEN LGSENQQSNN TFVKVYKSGS FGRSLDITKF SSYHELRSEL ARMFGLEGQL EDPVRSGWQL VFVDRENDVL LLGDDPWPEF
801: VSSVWCIKIL SPQEVQQMGK RGLELLNSAP PSSNNNVVEK LPSNNGNCDD FGNRSDPRNL GNGIASVGGS FNY
101: LQPLNAQEQK DPYLPAELGV PSRQPTNYFC KTLTASDTST HGGFSVPRRA AEKVFPPLDY SQQPPAQELM ARDLHDNEWK FRHIFRGQPK RHLLTTGWSV
201: FVSAKRLVAG DSVLFIWNDK NQLLLGIRRA NRPQTVMPSS VLSSDSMHLG LLAAAAHAAA TNSRFTIFYN PRASPSEFVI PLAKYVKAVY HTRVSVGMRF
301: RMLFETEESS VRRYMGTITG ICDLDPTRWA NSHWRSVKVG WDESTAGERQ PRVSLWEIEP LTTFPMYPSP FPLRLKRPWP PGLPSFHEDD MSMGMGMSSP
401: LMWDRGLQSL NFQGMGVNPW MQPRLDASGL LGMQNDVYQA MAAAALQDMR GIDPAKAAAS LLQFQNPSGF SMQPPSLMQP QMLQQQLSQQ QQQQQQLSQQ
501: QQQQSYLPSA STAAAVSAMS QFGSASQSMT SLCQQQSFLD TNGGNNNPMS PLHTLLSNFS QDESSQLLNL TRTTNSAAMT SSGWPSKRPA VDLSSFGNNS
601: NTQSVIEQLG QSHNTSNVPP NAVSLPPFPG GGRECSIEQE GGSPSDPHSH LLFGVNIDSS SLLMPNGMSN LRSIGIEGGD STTLPFTTSN FNNDFSGGNL
701: AMTTPSSCID EPGFLQSSEN LGSENQQSNN TFVKVYKSGS FGRSLDITKF SSYHELRSEL ARMFGLEGQL EDPVRSGWQL VFVDRENDVL LLGDDPWPEF
801: VSSVWCIKIL SPQEVQQMGK RGLELLNSAP PSSNNNVVEK LPSNNGNCDD FGNRSDPRNL GNGIASVGGS FNY
001: MKLSTSGLGQ QGHEGEKCLN SELWHACAGP LVSLPSSGSR VVYFPQGHSE QVAATTNKEV DGHIPNYPSL PPQLICQLHN VTMHADVETD EVYAQMTLQP
101: LTPEEQKETF VPIELGIPSK QPSNYFCKTL TASDTSTHGG FSVPRRAAEK VFPPLDYTLQ PPAQELIARD LHDVEWKFRH IFRGQPKRHL LTTGWSVFVS
201: AKRLVAGDSV IFIRNEKNQL FLGIRHATRP QTIVPSSVLS SDSMHIGLLA AAAHASATNS CFTVFFHPRA SQSEFVIQLS KYIKAVFHTR ISVGMRFRML
301: FETEESSVRR YMGTITGISD LDSVRWPNSH WRSVKVGWDE STAGERQPRV SLWEIEPLTT FPMYPSLFPL RLKRPWHAGT SSLPDGRGDL GSGLTWLRGG
401: GGEQQGLLPL NYPSVGLFPW MQQRLDLSQM GTDNNQQYQA MLAAGLQNIG GGDPLRQQFV QLQEPHHQYL QQSASHNSDL MLQQQQQQQA SRHLMHAQTQ
501: IMSENLPQQN MRQEVSNQPA GQQQQLQQPD QNAYLNAFKM QNGHLQQWQQ QSEMPSPSFM KSDFTDSSNK FATTASPASG DGNLLNFSIT GQSVLPEQLT
601: TEGWSPKASN TFSEPLSLPQ AYPGKSLALE PGNPQNPSLF GVDPDSGLFL PSTVPRFASS SGDAEASPMS LTDSGFQNSL YSCMQDTTHE LLHGAGQINS
701: SNQTKNFVKV YKSGSVGRSL DISRFSSYHE LREELGKMFA IEGLLEDPLR SGWQLVFVDK ENDILLLGDD PWESFVNNVW YIKILSPEDV HQMGDHGEGS
801: GGLFPQNPTH L
101: LTPEEQKETF VPIELGIPSK QPSNYFCKTL TASDTSTHGG FSVPRRAAEK VFPPLDYTLQ PPAQELIARD LHDVEWKFRH IFRGQPKRHL LTTGWSVFVS
201: AKRLVAGDSV IFIRNEKNQL FLGIRHATRP QTIVPSSVLS SDSMHIGLLA AAAHASATNS CFTVFFHPRA SQSEFVIQLS KYIKAVFHTR ISVGMRFRML
301: FETEESSVRR YMGTITGISD LDSVRWPNSH WRSVKVGWDE STAGERQPRV SLWEIEPLTT FPMYPSLFPL RLKRPWHAGT SSLPDGRGDL GSGLTWLRGG
401: GGEQQGLLPL NYPSVGLFPW MQQRLDLSQM GTDNNQQYQA MLAAGLQNIG GGDPLRQQFV QLQEPHHQYL QQSASHNSDL MLQQQQQQQA SRHLMHAQTQ
501: IMSENLPQQN MRQEVSNQPA GQQQQLQQPD QNAYLNAFKM QNGHLQQWQQ QSEMPSPSFM KSDFTDSSNK FATTASPASG DGNLLNFSIT GQSVLPEQLT
601: TEGWSPKASN TFSEPLSLPQ AYPGKSLALE PGNPQNPSLF GVDPDSGLFL PSTVPRFASS SGDAEASPMS LTDSGFQNSL YSCMQDTTHE LLHGAGQINS
701: SNQTKNFVKV YKSGSVGRSL DISRFSSYHE LREELGKMFA IEGLLEDPLR SGWQLVFVDK ENDILLLGDD PWESFVNNVW YIKILSPEDV HQMGDHGEGS
801: GGLFPQNPTH L
Arabidopsis Description
ARF8Auxin response factor [Source:UniProtKB/TrEMBL;Acc:A0A178UFA9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.