Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH58711 | Soybean | nucleus | 41.76 | 95.42 |
| KRH21113 | Soybean | nucleus | 94.32 | 94.53 |
| KRH42603 | Soybean | nucleus | 85.19 | 84.53 |
| VIT_10s0003g04100.t01 | Wine grape | nucleus | 80.51 | 79.63 |
| CDY02285 | Canola | nucleus | 71.6 | 73.65 |
| Bra010776.1-P | Field mustard | nucleus | 67.59 | 72.96 |
| CDY12048 | Canola | nucleus | 68.71 | 72.85 |
| CDX90245 | Canola | nucleus | 69.04 | 72.77 |
| CDY09598 | Canola | nucleus | 70.27 | 72.53 |
| GSMUA_Achr5P02450_001 | Banana | nucleus | 66.04 | 71.62 |
| AT1G30330.3 | Thale cress | nucleus | 73.61 | 70.7 |
| GSMUA_Achr3P23290_001 | Banana | nucleus | 64.25 | 70.37 |
| GSMUA_Achr5P26580_001 | Banana | nucleus | 62.36 | 69.39 |
| KRH73577 | Soybean | nucleus | 69.04 | 69.2 |
| GSMUA_Achr5P00590_001 | Banana | nucleus | 69.27 | 68.43 |
| KRH14545 | Soybean | nucleus | 68.15 | 68.3 |
| GSMUA_Achr11P... | Banana | nucleus | 68.04 | 66.92 |
| GSMUA_Achr11P... | Banana | nucleus | 61.47 | 66.59 |
| GSMUA_Achr6P19850_001 | Banana | nucleus | 63.14 | 66.32 |
| TraesCS7A01G461700.1 | Wheat | nucleus | 66.48 | 65.68 |
| TraesCS7D01G449900.2 | Wheat | nucleus | 66.37 | 65.64 |
| Os02t0164900-01 | Rice | nucleus | 66.37 | 65.64 |
| TraesCS7B01G363100.1 | Wheat | nucleus | 66.37 | 65.57 |
| EER90218 | Sorghum | nucleus | 66.82 | 65.29 |
| Zm00001d014377_P002 | Maize | nucleus | 66.26 | 64.89 |
| Os06t0677800-01 | Rice | nucleus | 66.26 | 64.89 |
| EES04575 | Sorghum | nucleus | 65.81 | 64.87 |
| HORVU7Hr1G106280.1 | Barley | nucleus | 66.37 | 63.54 |
| HORVU6Hr1G026730.9 | Barley | nucleus | 64.81 | 62.65 |
| Zm00001d053819_P002 | Maize | nucleus | 64.03 | 62.57 |
| TraesCS6D01G127600.2 | Wheat | nucleus | 64.25 | 62.24 |
| TraesCS6A01G138600.4 | Wheat | nucleus | 64.25 | 62.18 |
| TraesCS6B01G167100.1 | Wheat | nucleus | 63.92 | 61.92 |
| KRH30740 | Soybean | nucleus | 58.13 | 61.85 |
| KRH72896 | Soybean | nucleus | 58.24 | 61.75 |
| TraesCS5B01G039800.1 | Wheat | nucleus | 61.14 | 61.62 |
| KRH17251 | Soybean | nucleus | 57.8 | 61.57 |
| HORVU5Hr1G009650.20 | Barley | nucleus | 61.02 | 61.5 |
| EES17392 | Sorghum | nucleus | 61.14 | 61.34 |
| TraesCS5D01G045700.2 | Wheat | nucleus | 61.47 | 61.33 |
| TraesCS5A01G038300.2 | Wheat | nucleus | 61.36 | 61.29 |
| KRG98044 | Soybean | nucleus | 57.35 | 61.24 |
| Zm00001d036593_P001 | Maize | plastid | 65.37 | 61.15 |
| Zm00001d031064_P003 | Maize | nucleus | 60.91 | 60.98 |
| Os12t0613700-01 | Rice | nucleus | 61.02 | 60.96 |
| Zm00001d041497_P005 | Maize | nucleus | 59.69 | 60.36 |
| KRH22924 | Soybean | nucleus | 18.26 | 44.93 |
| KRH26266 | Soybean | nucleus | 28.29 | 38.2 |
| KRH06026 | Soybean | nucleus | 28.29 | 38.2 |
| KRH05923 | Soybean | nucleus | 39.31 | 37.83 |
| KRH37536 | Soybean | nucleus | 47.22 | 37.69 |
| KRH51289 | Soybean | nucleus | 28.29 | 37.69 |
| KRH17404 | Soybean | nucleus | 38.98 | 37.63 |
| KRH19355 | Soybean | nucleus | 46.99 | 37.31 |
| KRH12587 | Soybean | nucleus | 46.55 | 37.25 |
| KRH68924 | Soybean | nucleus | 27.28 | 37.01 |
| KRH02575 | Soybean | nucleus | 46.77 | 36.97 |
| KRH00001 | Soybean | nucleus | 27.17 | 36.75 |
| KRH49135 | Soybean | nucleus | 27.06 | 36.6 |
| KRH75716 | Soybean | nucleus | 28.06 | 36.42 |
| KRH49070 | Soybean | nucleus | 44.43 | 35.95 |
| KRH65922 | Soybean | nucleus | 27.62 | 35.89 |
| KRH74145 | Soybean | nucleus | 43.88 | 35.69 |
| KRH60117 | Soybean | nucleus | 42.98 | 35.12 |
| KRH06451 | Soybean | nucleus | 27.73 | 34.78 |
| KRH47893 | Soybean | nucleus | 27.73 | 34.78 |
| KRH41404 | Soybean | nucleus | 42.43 | 34.23 |
| KRG96367 | Soybean | nucleus | 25.28 | 33.53 |
| KRH68102 | Soybean | nucleus | 21.6 | 32.88 |
| KRH41062 | Soybean | nucleus | 30.4 | 32.08 |
| KRG89021 | Soybean | nucleus | 28.29 | 32.07 |
| KRH63855 | Soybean | nucleus | 29.96 | 31.91 |
| KRH59742 | Soybean | nucleus | 30.29 | 31.7 |
| KRH24914 | Soybean | nucleus | 27.84 | 31.57 |
| KRH54110 | Soybean | nucleus | 29.62 | 31.55 |
| KRH26391 | Soybean | nucleus | 27.28 | 30.66 |
Protein Annotations
| EntrezGene:100796447 | MapMan:15.5.5.1 | Gene3D:2.30.30.1040 | Gene3D:2.40.330.10 | Gene3D:3.10.20.90 | EMBL:ACUP02009184 |
| InterPro:AUX/IAA_dom | InterPro:Auxin_resp | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf | EnsemblPlantsGene:GLYMA_15G091000 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009725 |
| GO:GO:0009734 | GO:GO:0009987 | InterPro:IPR000270 | InterPro:IPR003340 | InterPro:IPR015300 | UniProt:K7MAG3 |
| EnsemblPlants:KRH11131 | ProteinID:KRH11131 | ProteinID:KRH11131.1 | InterPro:PB1_dom | PFAM:PF02309 | PFAM:PF02362 |
| PFAM:PF06507 | PFscan:PS50863 | PFscan:PS51745 | PANTHER:PTHR31384 | PANTHER:PTHR31384:SF68 | SMART:SM01019 |
| SUPFAM:SSF101936 | SUPFAM:SSF54277 | UniParc:UPI000294BC78 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr15:-:6983738..6989467
Molecular Weight (calculated)
99695.4 Da
IEP (calculated)
6.700
GRAVY (calculated)
-0.476
Length
898 amino acids
Sequence
(BLAST)
(BLAST)
001: MRLSSADFSP PPQEGEKRVL DSELWHACAG PLVSLPAVGS RVVYFPQGHS EQVAVSTNKE VDAHIPNYPS LPPQLICQLH NMTMHADVET DEVYAQMTLQ
101: PLNPQEQNEA YLPAELGTAS KQPTNYFCKT LTASDTSTHG GFSVPRRAAE KVFPPLDFSQ QPPAQELIAR DLHGNEWKFR HIFRGQPKRH LLTTGWSVFV
201: SAKRLVAGDS VLFIWNEKNQ LLLGIRRANR PQTVMPSSVL SSDSMHLGLL AAAAHAAATN SRFTIFYNPR ASPSEFVIPL AKYVKAVYHT RVSVGMRFRM
301: LFETEESSVR RYMGTITGIG DLDPVRWPNS HWRSVKVGWD ESTAGERQPR VSLWEIEPLT TFPMYPSSFP LRLKRPWPPG LPSFHAGMKD DDFGLNSPLL
401: WLRDTDRGLQ SLNFQGIGVN PWMQPRFDPT VLNMQTDMYQ AAAAAAVQDM RSLDPSKQLS ASLLQFQQPQ NFPNRTAALM QAQMLQKSQP QQIFGNNQEN
501: QHSPQSQPQT QAHLQQHLQH QHSFNSQHHH HQQQQQQQQV VDNQQISSAV STMSQLFSAP QPQSPPMQAI SSLCQNFSNS NGNSVTTIVS PLHSILGSFP
601: QDETSHLLNL PRTSSWIPIQ NSSGWPSKRV AVDPLLSSGA SHCVLPQVDQ LGQPHSTMSL NAITLPPFPG RESSIDQEGS NDPQNHLLFG VNIDPSSLLM
701: PNGMSSLKGV SGNNNSSTLP YQSSNYLNTT TGTDSSLNHG MTPNIGDSGF LHCPEDAGQG NPLNKTFVKV YKSGSFGRSL DITKFSSYHE LRGELARMFG
801: LEGELEDPVR SGWQLVFVDR ENDVLLLGDG PWPEFVNSVW CIKILSPQEV QQMGNNGLEL LNSVPNQRLS NGICDDYVSR QDPRNLSTGI TTVGSLDY
101: PLNPQEQNEA YLPAELGTAS KQPTNYFCKT LTASDTSTHG GFSVPRRAAE KVFPPLDFSQ QPPAQELIAR DLHGNEWKFR HIFRGQPKRH LLTTGWSVFV
201: SAKRLVAGDS VLFIWNEKNQ LLLGIRRANR PQTVMPSSVL SSDSMHLGLL AAAAHAAATN SRFTIFYNPR ASPSEFVIPL AKYVKAVYHT RVSVGMRFRM
301: LFETEESSVR RYMGTITGIG DLDPVRWPNS HWRSVKVGWD ESTAGERQPR VSLWEIEPLT TFPMYPSSFP LRLKRPWPPG LPSFHAGMKD DDFGLNSPLL
401: WLRDTDRGLQ SLNFQGIGVN PWMQPRFDPT VLNMQTDMYQ AAAAAAVQDM RSLDPSKQLS ASLLQFQQPQ NFPNRTAALM QAQMLQKSQP QQIFGNNQEN
501: QHSPQSQPQT QAHLQQHLQH QHSFNSQHHH HQQQQQQQQV VDNQQISSAV STMSQLFSAP QPQSPPMQAI SSLCQNFSNS NGNSVTTIVS PLHSILGSFP
601: QDETSHLLNL PRTSSWIPIQ NSSGWPSKRV AVDPLLSSGA SHCVLPQVDQ LGQPHSTMSL NAITLPPFPG RESSIDQEGS NDPQNHLLFG VNIDPSSLLM
701: PNGMSSLKGV SGNNNSSTLP YQSSNYLNTT TGTDSSLNHG MTPNIGDSGF LHCPEDAGQG NPLNKTFVKV YKSGSFGRSL DITKFSSYHE LRGELARMFG
801: LEGELEDPVR SGWQLVFVDR ENDVLLLGDG PWPEFVNSVW CIKILSPQEV QQMGNNGLEL LNSVPNQRLS NGICDDYVSR QDPRNLSTGI TTVGSLDY
001: MRLSSAGFNP QPHEGEKRVL NSELWHACAG PLVSLPPVGS RVVYFPQGHS EQVAASTNKE VDAHIPNYPS LHPQLICQLH NVTMHADVET DEVYAQMTLQ
101: PLNAQEQKDP YLPAELGVPS RQPTNYFCKT LTASDTSTHG GFSVPRRAAE KVFPPLDYSQ QPPAQELMAR DLHDNEWKFR HIFRGQPKRH LLTTGWSVFV
201: SAKRLVAGDS VLFIWNDKNQ LLLGIRRANR PQTVMPSSVL SSDSMHLGLL AAAAHAAATN SRFTIFYNPR ASPSEFVIPL AKYVKAVYHT RVSVGMRFRM
301: LFETEESSVR RYMGTITGIC DLDPTRWANS HWRSVKVGWD ESTAGERQPR VSLWEIEPLT TFPMYPSPFP LRLKRPWPPG LPSFHGLKED DMGMSMSSPL
401: MWDRGLQSLN FQGMGVNPWM QPRLDTSGLL GMQNDVYQAM AAAALQDMRG IDPAKAAASL LQFQNSPGFS MQSPSLVQPQ MLQQQLSQQQ QQLSQQQQQQ
501: QQLSQQQQQQ LSQQQQQQLS QQQQQQLSQQ QQQQAYLGVP ETHQPQSQAQ SQSNNHLSQQ QQQVVDNHNP SASSAAVVSA MSQFGSASQP NTSPLQSMTS
601: LCHQQSFSDT NGGNNPISPL HTLLSNFSQD ESSQLLHLTR TNSAMTSSGW PSKRPAVDSS FQHSGAGNNN TQSVLEQLGQ SHTSNVPPNA VSLPPFPGGR
701: ECSIEQEGSA SDPHSHLLFG VNIDSSSLLM PNGMSNLRSI GIEGGDSTTL PFTSSNFNND FSGNLAMTTP SSCIDESGFL QSSENLGSEN PQSNTFVKVY
801: KSGSFGRSLD ISKFSSYHEL RSELARMFGL EGQLEDPVRS GWQLVFVDRE NDVLLLGDDP WPEFVSSVWC IKILSPQEVQ QMGKRGLELL NSAPSSNNVD
901: KLPSNGNCDD FGNRSDPRNL GNGIASVGGS FNY
101: PLNAQEQKDP YLPAELGVPS RQPTNYFCKT LTASDTSTHG GFSVPRRAAE KVFPPLDYSQ QPPAQELMAR DLHDNEWKFR HIFRGQPKRH LLTTGWSVFV
201: SAKRLVAGDS VLFIWNDKNQ LLLGIRRANR PQTVMPSSVL SSDSMHLGLL AAAAHAAATN SRFTIFYNPR ASPSEFVIPL AKYVKAVYHT RVSVGMRFRM
301: LFETEESSVR RYMGTITGIC DLDPTRWANS HWRSVKVGWD ESTAGERQPR VSLWEIEPLT TFPMYPSPFP LRLKRPWPPG LPSFHGLKED DMGMSMSSPL
401: MWDRGLQSLN FQGMGVNPWM QPRLDTSGLL GMQNDVYQAM AAAALQDMRG IDPAKAAASL LQFQNSPGFS MQSPSLVQPQ MLQQQLSQQQ QQLSQQQQQQ
501: QQLSQQQQQQ LSQQQQQQLS QQQQQQLSQQ QQQQAYLGVP ETHQPQSQAQ SQSNNHLSQQ QQQVVDNHNP SASSAAVVSA MSQFGSASQP NTSPLQSMTS
601: LCHQQSFSDT NGGNNPISPL HTLLSNFSQD ESSQLLHLTR TNSAMTSSGW PSKRPAVDSS FQHSGAGNNN TQSVLEQLGQ SHTSNVPPNA VSLPPFPGGR
701: ECSIEQEGSA SDPHSHLLFG VNIDSSSLLM PNGMSNLRSI GIEGGDSTTL PFTSSNFNND FSGNLAMTTP SSCIDESGFL QSSENLGSEN PQSNTFVKVY
801: KSGSFGRSLD ISKFSSYHEL RSELARMFGL EGQLEDPVRS GWQLVFVDRE NDVLLLGDDP WPEFVSSVWC IKILSPQEVQ QMGKRGLELL NSAPSSNNVD
901: KLPSNGNCDD FGNRSDPRNL GNGIASVGGS FNY
Arabidopsis Description
ARF6Auxin response factor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZTX8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.