CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68102	Soybean	nucleus	71.34	81.86
VIT_07s0104g01230.t01	Wine grape	nucleus	48.45	47.13
KRH58711	Soybean	nucleus	25.55	44.02
KRH22924	Soybean	nucleus	21.12	39.18
KRH06026	Soybean	nucleus	36.78	37.44
KRH26266	Soybean	nucleus	36.34	36.99
KRH51289	Soybean	nucleus	36.04	36.2
KRH68924	Soybean	nucleus	34.27	35.05
KRH49135	Soybean	nucleus	33.83	34.49
KRH75716	Soybean	nucleus	34.86	34.1
KRH00001	Soybean	nucleus	33.09	33.73
KRH65922	Soybean	nucleus	34.42	33.72
KRH06451	Soybean	nucleus	34.27	32.4
KRH47893	Soybean	nucleus	33.97	32.12
KRH59742	Soybean	nucleus	40.62	32.05
KRH41062	Soybean	nucleus	40.18	31.96
KRH63855	Soybean	nucleus	39.29	31.55
KRH54110	Soybean	nucleus	39.29	31.55
KRH24914	Soybean	nucleus	32.94	28.16
KRG89021	Soybean	nucleus	32.35	27.65
KRH17251	Soybean	nucleus	34.12	27.4
KRH26391	Soybean	nucleus	32.2	27.28
KRH72896	Soybean	nucleus	34.12	27.27
KRH30740	Soybean	nucleus	33.83	27.13
KRG98044	Soybean	nucleus	33.53	26.99
KRH73577	Soybean	nucleus	33.53	25.33
KRH11131	Soybean	nucleus	33.53	25.28
KRH21113	Soybean	nucleus	33.23	25.11
KRH42603	Soybean	nucleus	33.23	24.86
KRH14545	Soybean	nucleus	32.79	24.78
KRH05923	Soybean	nucleus	30.87	22.4
KRH17404	Soybean	nucleus	30.72	22.37
KRH49070	Soybean	nucleus	33.23	20.27
KRH60117	Soybean	nucleus	32.64	20.11
KRH41404	Soybean	nucleus	32.64	19.86
KRH74145	Soybean	nucleus	32.35	19.84
KRH37536	Soybean	nucleus	32.79	19.73
KRH19355	Soybean	nucleus	32.94	19.72
KRH12587	Soybean	nucleus	32.5	19.61
KRH02575	Soybean	nucleus	32.35	19.28

Protein Annotations

EntrezGene:100802387	MapMan:15.5.5.1	Gene3D:2.30.30.1040	Gene3D:2.40.330.10	Gene3D:3.10.20.90	EMBL:ACUP02012154
InterPro:Auxin_resp	InterPro:B3_DNA-bd	InterPro:DNA-bd_pseudobarrel_sf	EnsemblPlantsGene:GLYMA_19G206100	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009725	GO:GO:0009734
GO:GO:0009987	InterPro:IPR000270	InterPro:IPR003340	InterPro:IPR015300	UniProt:K7MZF7	EnsemblPlants:KRG96367
ProteinID:KRG96367	ProteinID:KRG96367.1	InterPro:PB1_dom	PFAM:PF02362	PFAM:PF06507	PFscan:PS50863
PFscan:PS51745	PANTHER:PTHR31384	PANTHER:PTHR31384:SF25	SMART:SM01019	SUPFAM:SSF101936	UniParc:UPI000294DAA2
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr19:-:46167136..46178414

Molecular Weight (calculated)

75649.9 Da

IEP (calculated)

7.498

GRAVY (calculated)

-0.489

Length

677 amino acids

Sequence
(BLAST)

001: MRKRRDMDSP NTQQGLLPSK KGVKDSLYTE LWRACAGSFV YVPREEETVL YFPQGHLEQV AAYTQHQQDG HMEIPVYDLP SKILCKIMHI ELKAEAFSDE
101: VYAQVTLVPA LKQDNLRLEV EENDQIPSIT TTYTFSKILT PSDTSTHGGF SVPKKHADEC FPPLDMTQQT PAQEIVAKDL NGFEWHFRHI YRGKPKRHLL
201: TSGWSTFVNA KKLVAGDSCI FVRAESGEIR VGIRRATEHL SNVSQSSSLI SGHSMQLGIL ASASHAVSSG TMFIVYYHPW TNPFEFIVPL RTYLKSTVPD
301: YPIGMRVQMQ HEVEESLRRH AGTIIGHEDI DKIRWPGSEW RCLKVQWDAV LDDKMNPERV CPWWIEPLES AKEKKQVPAL PTTKKALALN QRSLPGISSF
401: GMHDGQNSAG PSSQTRREDR DLQGQDYSGI HSAQPLQRAP PTDVIHPSKV PIRGSRFGKE NPNQLPFPMQ GPLHKSLSRS MSLTHEDLSI TSSNLSSIGS
501: ESLGWPSTES RNENDVPFGQ PGSCSTFKLF GVSLIDRSSE LPSLQSAAFN KTSSLLSNPP MRVAPGKTCK KCHRVNNRSC TKVLKLGTAL GRAVDLARFH
601: GYTELIAELD SMFEFRGSLI NESSGWHVTC MDDDGDMMQL GDYPWQDFQG VVQKMIICPK EGTNNIKPSS SANPSSL

Best Arabidopsis Sequence Match ( AT5G62000.1 )
(BLAST)

001: MASSEVSMKG NRGGDNFSSS GFSDPKETRN VSVAGEGQKS NSTRSAAAER ALDPEAALYR ELWHACAGPL VTVPRQDDRV FYFPQGHIEQ VEASTNQAAE
101: QQMPLYDLPS KLLCRVINVD LKAEADTDEV YAQITLLPEA NQDENAIEKE APLPPPPRFQ VHSFCKTLTA SDTSTHGGFS VLRRHADECL PPLDMSRQPP
201: TQELVAKDLH ANEWRFRHIF RGQPRRHLLQ SGWSVFVSSK RLVAGDAFIF LRGENGELRV GVRRAMRQQG NVPSSVISSH SMHLGVLATA WHAISTGTMF
301: TVYYKPRTSP SEFIVPFDQY MESVKNNYSI GMRFKMRFEG EEAPEQRFTG TIVGIEESDP TRWPKSKWRS LKVRWDETSS IPRPDRVSPW KVEPALAPPA
401: LSPVPMPRPK RPRSNIAPSS PDSSMLTREG TTKANMDPLP ASGLSRVLQG QEYSTLRTKH TESVECDAPE NSVVWQSSAD DDKVDVVSGS RRYGSENWMS
501: SARHEPTYTD LLSGFGTNID PSHGQRIPFY DHSSSPSMPA KRILSDSEGK FDYLANQWQM IHSGLSLKLH ESPKVPAATD ASLQGRCNVK YSEYPVLNGL
601: STENAGGNWP IRPRALNYYE EVVNAQAQAQ AREQVTKQPF TIQEETAKSR EGNCRLFGIP LTNNMNGTDS TMSQRNNLND AAGLTQIASP KVQDLSDQSK
701: GSKSTNDHRE QGRPFQTNNP HPKDAQTKTN SSRSCTKVHK QGIALGRSVD LSKFQNYEEL VAELDRLFEF NGELMAPKKD WLIVYTDEEN DMMLVGDDPW
801: QEFCCMVRKI FIYTKEEVRK MNPGTLSCRS EEEAVVGEGS DAKDAKSASN PSLSSAGNS

Arabidopsis Description

ARF2Auxin response factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94JM3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.