CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG96367	Soybean	nucleus	81.86	71.34
VIT_07s0104g01230.t01	Wine grape	nucleus	47.8	40.52
KRH58711	Soybean	nucleus	23.73	35.62
KRH06026	Soybean	nucleus	36.44	32.33
KRH22924	Soybean	nucleus	19.83	32.05
KRH26266	Soybean	nucleus	35.93	31.88
KRH49135	Soybean	nucleus	35.59	31.63
KRH00001	Soybean	nucleus	34.75	30.87
KRH51289	Soybean	nucleus	35.25	30.86
KRH65922	Soybean	nucleus	35.59	30.39
KRH75716	Soybean	nucleus	35.59	30.35
KRH68924	Soybean	nucleus	33.39	29.76
KRH06451	Soybean	nucleus	34.75	28.63
KRH47893	Soybean	nucleus	34.41	28.35
KRH59742	Soybean	nucleus	40.85	28.09
KRH41062	Soybean	nucleus	40.51	28.08
KRH54110	Soybean	nucleus	39.32	27.52
KRH63855	Soybean	nucleus	38.98	27.28
KRH24914	Soybean	nucleus	33.73	25.13
KRG89021	Soybean	nucleus	32.71	24.37
KRH26391	Soybean	nucleus	32.88	24.28
KRG98044	Soybean	nucleus	33.56	23.54
KRH17251	Soybean	nucleus	33.39	23.37
KRH72896	Soybean	nucleus	33.39	23.26
KRH30740	Soybean	nucleus	33.22	23.22
KRH11131	Soybean	nucleus	32.88	21.6
KRH21113	Soybean	nucleus	32.54	21.43
KRH73577	Soybean	nucleus	32.54	21.43
KRH42603	Soybean	nucleus	32.71	21.33
KRH14545	Soybean	nucleus	31.69	20.87
KRH17404	Soybean	nucleus	30.85	19.57
KRH05923	Soybean	nucleus	30.85	19.51
KRH49070	Soybean	nucleus	33.56	17.84
KRH60117	Soybean	nucleus	33.22	17.83
KRH74145	Soybean	nucleus	32.71	17.48
KRH41404	Soybean	nucleus	32.88	17.43
KRH19355	Soybean	nucleus	32.54	16.98
KRH37536	Soybean	nucleus	32.03	16.8
KRH12587	Soybean	nucleus	31.86	16.76
KRH02575	Soybean	nucleus	31.86	16.55

Protein Annotations

MapMan:15.5.5.1	Gene3D:2.30.30.1040	Gene3D:2.40.330.10	Gene3D:3.10.20.90	EMBL:ACUP02002100	InterPro:Auxin_resp
InterPro:B3_DNA-bd	InterPro:DNA-bd_pseudobarrel_sf	EnsemblPlantsGene:GLYMA_03G208800	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009725	GO:GO:0009734	GO:GO:0009987
UniProt:I1JQG4	InterPro:IPR000270	InterPro:IPR003340	InterPro:IPR015300	EnsemblPlants:KRH68102	ProteinID:KRH68102
ProteinID:KRH68102.1	InterPro:PB1_dom	PFAM:PF02362	PFAM:PF06507	PFscan:PS50863	PFscan:PS51745
PANTHER:PTHR31384	PANTHER:PTHR31384:SF25	SMART:SM01019	SUPFAM:SSF101936	SUPFAM:SSF54277	UniParc:UPI00023C17A5
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:41564169..41574975

Molecular Weight (calculated)

65331.5 Da

IEP (calculated)

7.328

GRAVY (calculated)

-0.476

Length

590 amino acids

Sequence
(BLAST)

001: MNVELKAEAY SDEVYAQVTL VPEVQKDNLC FEEEVNIDQI PSRNAAYSFS KILTPSDTST HGGFSVPKKY ADECFPPLDM TLQTPAQEIV AKDLNGFEWR
101: FRHIYRGQPK RHLLTSGWSL FVNAKKLVAG DSCIFVRGES GELRVGIRRA AENLSNISQS SSLISGHSMQ LGILTNASNA VGNRTMFLVY YRPWTNPFEF
201: IVHLQTYLKS TLQDYPIGTR VQMQHEVEES LRRLAGTIIG NEDIDSIRWP GSAWRRLKVQ WDAIVEDKMH PERVCPWWIE PLESAKEKKQ VPALPTKKKG
301: HALLNQRSLP GISGFGKNDV HQNSAGPSSQ TRRADGDLQG QDYSGLSPPQ PLQRAPSTDI IRPSKVPIRG SRFGKENRNQ HPFLKQDPLH KSLGRSMSLT
401: HEDLSITSSN LTSIGSESLG MPSTESRDEN DAPFGQPGSS STFKLFGVNL IDSSPEIPSV NFVDLNKTSS LPSSPPMGVA PGKTCKKCRC VNNRSCTKVL
501: KLGNALGRAV DLARFNGYTE LIAELDSMFD FQGTLISGGS GWHVTCLDDE GDMMQLGDYP WQDFLGVVQK MIICPKEGTD NLKPGSSANP

Best Arabidopsis Sequence Match ( AT4G23980.2 )
(BLAST)

001: MANRGGEYLY DELWKLCAGP LVDVPQAQER VYYFPQGHME QLEASTQQVD LNTMKPLFVL PPKILCNVMN VSLQAEKDTD EVYAQITLIP VGTEVDEPMS
101: PDPSPPELQR PKVHSFSKVL TASDTSTHGG FSVLRKHATE CLPPLDMTQQ TPTQELVAED VHGYQWKFKH IFRGQPRRHL LTTGWSTFVT SKRLVAGDTF
201: VFLRGENGEL RVGVRRANLQ QSSMPSSVIS SHSMHLGVLA TARHATQTKT MFIVYYKPRT SQFIISLNKY LEAMSNKFSV GMRFKMRFEG EDSPERRYSG
301: TVIGVKDCSP HWKDSKWRCL EVHWDEPASI SRPNKVSPWE IEPFVNSENV PKSVMLKNKR PRQVSEVSAL GITASNLWSS VLTQPHEFAQ SCITSQWSSP
401: QQCHRDANED AKKSDWLNNS YSVSNVAKDS TLNDQMVSPV EQKKPETTAN YRLFGIDLMS SSLAVPEEKT APMRPINISK PTMDSHSDPK SEISKVSEEK
501: KQEPAEGSPK EVQSKQSSST RSRTKVQMQG VPVGRAVDLN ALKGYNELID DIEKLFDIKG ELRSRNQWEI VFTDDEGDMM LVGDDPWPEF CNMVKRIFIW
601: SKEEVKKMTP GNQLRMLLRE VETTLTTTSK TDNHSN

Arabidopsis Description

ARF9Auxin response factor 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9XED8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.