CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH58711	Soybean	nucleus	42.65	98.22
KRH21113	Soybean	nucleus	84.97	85.83
KRH11131	Soybean	nucleus	84.53	85.19
VIT_10s0003g04100.t01	Wine grape	nucleus	79.01	78.74
CDY02285	Canola	nucleus	68.84	71.36
CDX90245	Canola	nucleus	66.63	70.77
CDY12048	Canola	nucleus	66.19	70.72
Bra010776.1-P	Field mustard	nucleus	64.97	70.67
CDY09598	Canola	nucleus	67.85	70.57
GSMUA_Achr5P02450_001	Banana	nucleus	63.76	69.69
AT1G30330.3	Thale cress	nucleus	71.38	69.09
KRH73577	Soybean	nucleus	68.18	68.86
GSMUA_Achr3P23290_001	Banana	nucleus	61.66	68.05
KRH14545	Soybean	nucleus	66.85	67.52
GSMUA_Achr5P26580_001	Banana	nucleus	59.89	67.16
GSMUA_Achr5P00590_001	Banana	nucleus	66.85	66.56
GSMUA_Achr11P...	Banana	nucleus	65.86	65.28
GSMUA_Achr6P19850_001	Banana	nucleus	61.66	65.26
GSMUA_Achr11P...	Banana	nucleus	59.67	65.14
TraesCS7A01G461700.1	Wheat	nucleus	64.42	64.14
TraesCS7D01G449900.2	Wheat	nucleus	64.31	64.1
Os02t0164900-01	Rice	nucleus	64.2	63.99
EER90218	Sorghum	nucleus	64.97	63.98
TraesCS7B01G363100.1	Wheat	nucleus	64.2	63.92
EES04575	Sorghum	nucleus	64.2	63.78
Zm00001d014377_P002	Maize	nucleus	64.42	63.58
Os06t0677800-01	Rice	nucleus	64.2	63.36
HORVU7Hr1G106280.1	Barley	nucleus	64.31	62.05
KRH72896	Soybean	nucleus	57.79	61.75
Zm00001d053819_P002	Maize	nucleus	62.54	61.59
KRH30740	Soybean	nucleus	57.35	61.49
KRH17251	Soybean	nucleus	57.13	61.33
EES17392	Sorghum	nucleus	60.44	61.12
KRG98044	Soybean	nucleus	56.69	61.0
HORVU5Hr1G009650.20	Barley	nucleus	59.89	60.83
HORVU6Hr1G026730.9	Barley	nucleus	62.43	60.82
TraesCS6A01G138600.4	Wheat	nucleus	62.32	60.78
TraesCS6D01G127600.2	Wheat	nucleus	62.21	60.73
TraesCS5B01G039800.1	Wheat	nucleus	59.78	60.72
Zm00001d031064_P003	Maize	nucleus	60.11	60.65
TraesCS6B01G167100.1	Wheat	nucleus	61.88	60.41
TraesCS5A01G038300.2	Wheat	nucleus	60.0	60.4
TraesCS5D01G045700.2	Wheat	nucleus	60.0	60.33
Os12t0613700-01	Rice	nucleus	59.89	60.29
Zm00001d041497_P005	Maize	nucleus	58.9	60.02
Zm00001d036593_P001	Maize	plastid	63.54	59.9
KRH22924	Soybean	nucleus	17.9	44.38
KRH05923	Soybean	nucleus	39.78	38.59
KRH37536	Soybean	nucleus	47.62	38.31
KRH02575	Soybean	nucleus	47.96	38.2
KRH17404	Soybean	nucleus	39.12	38.06
KRH06026	Soybean	nucleus	27.96	38.05
KRH26266	Soybean	nucleus	27.96	38.05
KRH19355	Soybean	nucleus	47.51	38.02
KRH12587	Soybean	nucleus	47.07	37.97
KRH51289	Soybean	nucleus	28.07	37.69
KRH68924	Soybean	nucleus	27.07	37.01
KRH49135	Soybean	nucleus	26.85	36.6
KRH75716	Soybean	nucleus	27.62	36.13
KRH65922	Soybean	nucleus	27.51	36.03
KRH00001	Soybean	nucleus	26.41	35.99
KRH49070	Soybean	nucleus	43.87	35.77
KRH74145	Soybean	nucleus	43.54	35.69
KRH60117	Soybean	nucleus	42.98	35.4
KRH06451	Soybean	nucleus	27.51	34.78
KRH47893	Soybean	nucleus	27.4	34.64
KRH41404	Soybean	nucleus	42.1	34.23
KRG96367	Soybean	nucleus	24.86	33.23
KRH68102	Soybean	nucleus	21.33	32.71
KRH41062	Soybean	nucleus	29.94	31.84
KRH63855	Soybean	nucleus	29.39	31.55
KRH59742	Soybean	nucleus	29.83	31.47
KRH54110	Soybean	nucleus	29.28	31.44
KRG89021	Soybean	nucleus	27.4	31.31
KRH24914	Soybean	nucleus	27.07	30.93
KRH26391	Soybean	nucleus	26.52	30.04

Protein Annotations

EntrezGene:100806203	MapMan:15.5.5.1	Gene3D:2.30.30.1040	Gene3D:2.40.330.10	Gene3D:3.10.20.90	EMBL:ACUP02004819
InterPro:Auxin_resp	InterPro:B3_DNA-bd	InterPro:DNA-bd_pseudobarrel_sf	EnsemblPlantsGene:GLYMA_08G100100	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009725	GO:GO:0009734
GO:GO:0009987	UniProt:I1KRX2	InterPro:IPR000270	InterPro:IPR003340	InterPro:IPR015300	EnsemblPlants:KRH42603
ProteinID:KRH42603	ProteinID:KRH42603.1	InterPro:PB1_dom	PFAM:PF02362	PFAM:PF06507	PFscan:PS50863
PFscan:PS51745	PANTHER:PTHR31384	PANTHER:PTHR31384:SF68	SMART:SM01019	SUPFAM:SSF101936	SUPFAM:SSF54277
UniParc:UPI00023C5F0F	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:7673075..7678599

Molecular Weight (calculated)

100360.0 Da

IEP (calculated)

6.645

GRAVY (calculated)

-0.484

Length

905 amino acids

Sequence
(BLAST)

001: MKLSSPGFSP PPQEGEKRVL DSELWHACAG PLVSLPAVGS RVVYFPQGHS EQVAVSTNRE VDGHIPNYPS LPPQLICQLH NLTMHADTET DEVYAQMTLQ
101: PLNPQEQKGA YLPAELGTPS KQPTNYFCKI LTASDTSTHG GFSVPRRAAE KVFPPLDFSQ QPPCQELIAR DLHGNEWKFR HIFRGQPKRH LLTTGWSVFV
201: SAKRLVAGDS VLFIWNEKNQ LLLGIRRANR PQPVMPSSVL SSDSMHLGLL AAAAHAAATN SRFTIFYNPR ASPSEFVIPL AKYVKAVYHT RVSVGMRFRM
301: LFETEESSVR RYMGTITGIS DLDSIRWPNS HWRSVKVGWD ESTAGERQPR VSLWEIEPLT TFPMYPSPFP LRLKRPWPPG LPLFHAGLKD DDFGINSSLM
401: WLRDTDRGLP SLNFQGIGVS PWMQPRLDPS MVNYQSDMYQ AMAAAALQDM WTSNPSKQHP TSSIQFQQPQ NFPNQTSPLM QTQLLQQSPS QQAFPNSQEN
501: PHPSPSQSQA QTQTHFQQHL QHQHSFNNQN QHHLLPQQQQ QPQQPQLQQQ QVVDHQQISS VVSTMSQFVS AAQSQSPPMQ AISSLGHQQS FSDSNGNPTT
601: TAIVSPLHSI LDSFPQDDTS HLLSLPRSTS WVPVQHSTAW PPSKRVVVDP LLSSGASQCV LPQVEQLGQP HSTMAQNGIA LPAFPGRECT IEGSNDPQNH
701: LLFGVNIEPS SLLMHNGMSS LKGVSSNSDS PTIPFQSSNY LNTTGPDSSL NPGMTHNIGE TGFLQTPENG GQGNPSNKTF VKVYKSGSFG RSLDITKFTS
801: YPELRSELAR MFGLEGELED PVRSGWQLVF VDQENDVLLL GDGPWPEFVN SVGYIKILSP QEVQQMGNNE LELLNSVPIQ RLSNGVCEDP RNLSTGITTV
901: GSLNY

Best Arabidopsis Sequence Match ( AT1G30330.1 )
(BLAST)

001: MRLSSAGFNP QPHEGEKRVL NSELWHACAG PLVSLPPVGS RVVYFPQGHS EQVAASTNKE VDAHIPNYPS LHPQLICQLH NVTMHADVET DEVYAQMTLQ
101: PLNAQEQKDP YLPAELGVPS RQPTNYFCKT LTASDTSTHG GFSVPRRAAE KVFPPLDYSQ QPPAQELMAR DLHDNEWKFR HIFRGQPKRH LLTTGWSVFV
201: SAKRLVAGDS VLFIWNDKNQ LLLGIRRANR PQTVMPSSVL SSDSMHLGLL AAAAHAAATN SRFTIFYNPR ASPSEFVIPL AKYVKAVYHT RVSVGMRFRM
301: LFETEESSVR RYMGTITGIC DLDPTRWANS HWRSVKVGWD ESTAGERQPR VSLWEIEPLT TFPMYPSPFP LRLKRPWPPG LPSFHGLKED DMGMSMSSPL
401: MWDRGLQSLN FQGMGVNPWM QPRLDTSGLL GMQNDVYQAM AAAALQDMRG IDPAKAAASL LQFQNSPGFS MQSPSLVQPQ MLQQQLSQQQ QQLSQQQQQQ
501: QQLSQQQQQQ LSQQQQQQLS QQQQQQLSQQ QQQQAYLGVP ETHQPQSQAQ SQSNNHLSQQ QQQVVDNHNP SASSAAVVSA MSQFGSASQP NTSPLQSMTS
601: LCHQQSFSDT NGGNNPISPL HTLLSNFSQD ESSQLLHLTR TNSAMTSSGW PSKRPAVDSS FQHSGAGNNN TQSVLEQLGQ SHTSNVPPNA VSLPPFPGGR
701: ECSIEQEGSA SDPHSHLLFG VNIDSSSLLM PNGMSNLRSI GIEGGDSTTL PFTSSNFNND FSGNLAMTTP SSCIDESGFL QSSENLGSEN PQSNTFVKVY
801: KSGSFGRSLD ISKFSSYHEL RSELARMFGL EGQLEDPVRS GWQLVFVDRE NDVLLLGDDP WPEFVSSVWC IKILSPQEVQ QMGKRGLELL NSAPSSNNVD
901: KLPSNGNCDD FGNRSDPRNL GNGIASVGGS FNY

Arabidopsis Description

ARF6Auxin response factor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZTX8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.