Factsheet for HORVU7Hr1G106280.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G363100.1	Wheat	nucleus	95.1	98.13
TraesCS7A01G461700.1	Wheat	nucleus	94.78	97.8
TraesCS7D01G449900.2	Wheat	nucleus	94.67	97.8
Os06t0677800-01	Rice	nucleus	86.14	88.11
KRH58711	Soybean	nucleus	36.78	87.79
EER90218	Sorghum	nucleus	84.54	86.29
Zm00001d014377_P002	Maize	nucleus	83.9	85.82
Zm00001d036593_P001	Maize	plastid	82.09	80.21
HORVU6Hr1G026730.9	Barley	nucleus	76.76	77.5
VIT_10s0003g04100.t01	Wine grape	nucleus	67.7	69.93
GSMUA_Achr5P00590_001	Banana	nucleus	67.16	69.31
GSMUA_Achr11P...	Banana	nucleus	60.45	68.4
GSMUA_Achr6P19850_001	Banana	nucleus	60.66	66.55
KRH11131	Soybean	nucleus	63.54	66.37
CDY12048	Canola	nucleus	59.91	66.35
Bra010776.1-P	Field mustard	nucleus	58.85	66.35
KRH21113	Soybean	nucleus	63.33	66.29
CDX90245	Canola	nucleus	60.13	66.2
CDY02285	Canola	nucleus	61.41	65.98
CDY09598	Canola	nucleus	60.13	64.83
KRH42603	Soybean	nucleus	62.05	64.31
AT1G30330.3	Thale cress	nucleus	62.79	62.99
HORVU5Hr1G009650.20	Barley	nucleus	58.53	61.62
HORVU2Hr1G121110.32	Barley	nucleus	52.24	58.47
HORVU7Hr1G033820.5	Barley	nucleus	44.78	39.4
HORVU2Hr1G076920.3	Barley	nucleus	26.44	37.13
HORVU6Hr1G020330.30	Barley	nucleus	43.28	35.58
HORVU7Hr1G051930.4	Barley	nucleus	40.83	35.36
HORVU2Hr1G109650.18	Barley	nucleus	35.18	34.48
HORVU7Hr1G096460.7	Barley	mitochondrion, nucleus, vacuole	42.75	33.36
HORVU3Hr1G097200.10	Barley	nucleus	27.08	30.06
HORVU3Hr1G096410.4	Barley	nucleus, plastid	25.27	29.48
HORVU3Hr1G096510.3	Barley	plastid	25.59	28.78
HORVU3Hr1G032230.6	Barley	nucleus, plastid	23.67	27.75

Protein Annotations

MapMan:15.5.5.1	Gene3D:2.30.30.1040	Gene3D:2.40.330.10	Gene3D:3.10.20.90	InterPro:AUX/IAA_dom	InterPro:Auxin_resp
InterPro:B3_DNA-bd	InterPro:DNA-bd_pseudobarrel_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009719	GO:GO:0009725	GO:GO:0009734	GO:GO:0009987	EnsemblPlantsGene:HORVU7Hr1G106280
EnsemblPlants:HORVU7Hr1G106280.1	InterPro:IPR000270	InterPro:IPR003340	InterPro:IPR015300	UniProt:M0XAA8	InterPro:PB1_dom
PFAM:PF02309	PFAM:PF02362	PFAM:PF06507	PFscan:PS50863	PFscan:PS51745	PANTHER:PTHR31384
PANTHER:PTHR31384:SF22	SMART:SM01019	SUPFAM:SSF101936	SUPFAM:SSF54277	UniParc:UPI000296EC26	SEG:seg

Description

Auxin response factor [Source:UniProtKB/TrEMBL;Acc:M0XAA8]

Coordinates

chrchr7H:+:618942336..618948720

Molecular Weight (calculated)

103357.0 Da

IEP (calculated)

6.599

GRAVY (calculated)

-0.412

Length

938 amino acids

Sequence
(BLAST)

001: MRLSSPAGAV LPAQSPASPE AAEEHKCLNS ELWHACAGPL VSLPAVGSRV VYFPQGHSEQ VAASTNKEIE SQIPNYPNLP PQLICQLHNV TMHADAETDE
101: VYAQMTLQPL NPVIHIYHVP CASFLFNPVS KGVTSACFSF QQELKDPYLP AELGTANKQP TNYFCKTLTA SDTSTHGGFS VPRRAAEKVF PPLDFTMQPP
201: AQELFAKDLH GNEWKFRHIF RGQPKRHLLT TGWSVFVSAK RLVAGDSVLF IWNDNNQLLL GIRRAARPQT VMPSSVLSSD SMHIGLLAAA AHAASTNSRF
301: TIFYNPRASP CEFVIPLAKY VKAVYHTRIS VGMRFRMLFE TEESSVRRYM GTITGISDLD AVRWPNSHWR SVKVGWDEST AGERQPRVSL WEIEPLTTFP
401: MYPTPFPLRL KRPWPTGLPS LHGGKDDDLT SSLMWLRDSA NPGFQSLNFG GAGMNPWMQP RLDASLLGLQ PDIYQTMAAA AFQDPTKVSP TMLQFQQPQN
501: MVGRATPLLQ SQILQQMQPQ FQQQSYLQNI NGATIQGQAQ SEFLQQQLQR CQSFNEQKPQ LLQQQESNQQ QSQGMQVPQH QHMQQQKNMA NYQSAYSQLS
601: PGPQSSPTAL QTVLPFSQPQ SFSDTKMSSL SPSGAPTMHN TLGPFSSETA SHLSMSRPTA VPVAGSWSSK RVAVESLLPS RPQATPHMEQ LSTTPPSIPQ
701: SSALAPLPGR GCLVDQDGNS DPQNHLLFGV NIDSHSLLMQ GGLHDENDST AIPYSTSNFL SPSQHDFSLD QTLNSSGCLD ESGYVPCSHT PDQVNQPPAT
801: FVKVYKSGTY GRSLDITKFS NYHELRRELG RLFGLEGQLE DPMRSGWQLV FVDREEDVLL VGDDPWQEFV NSVSCIKILS PQEVQQMGKQ GLELLSSAPG
901: KRLGGGGGSS SCDDYASRQE SRSLSTGIAS VGSVEVEF

Best Arabidopsis Sequence Match ( AT1G30330.2 )
(BLAST)

001: MRLSSAGFNP QPHEVTGEKR VLNSELWHAC AGPLVSLPPV GSRVVYFPQG HSEQVAASTN KEVDAHIPNY PSLHPQLICQ LHNVTMHADV ETDEVYAQMT
101: LQPLNAQEQK DPYLPAELGV PSRQPTNYFC KTLTASDTST HGGFSVPRRA AEKVFPPLDY SQQPPAQELM ARDLHDNEWK FRHIFRGQPK RHLLTTGWSV
201: FVSAKRLVAG DSVLFIWNDK NQLLLGIRRA NRPQTVMPSS VLSSDSMHLG LLAAAAHAAA TNSRFTIFYN PRASPSEFVI PLAKYVKAVY HTRVSVGMRF
301: RMLFETEESS VRRYMGTITG ICDLDPTRWA NSHWRSVKVG WDESTAGERQ PRVSLWEIEP LTTFPMYPSP FPLRLKRPWP PGLPSFHGLK EDDMGMSMSS
401: PLMWDRGLQS LNFQGMGVNP WMQPRLDTSG LLGMQNDVYQ AMAAAALQDM RGIDPAKAAA SLLQFQNSPG FSMQSPSLVQ PQMLQQQLSQ QQQQLSQQQQ
501: QQQQLSQQQQ QQLSQQQQQQ LSQQQQQQLS QQQQQQAYLG VPETHQPQSQ AQSQSNNHLS QQQQQVVDNH NPSASSAAVV SAMSQFGSAS QPNTSPLQSM
601: TSLCHQQSFS DTNGGNNPIS PLHTLLSNFS QDESSQLLHL TRTNSAMTSS GWPSKRPAVD SSFQHSGAGN NNTQSVLEQL GQSHTSNVPP NAVSLPPFPG
701: GRECSIEQEG SASDPHSHLL FGVNIDSSSL LMPNGMSNLR SIGIEGGDST TLPFTSSNFN NDFSGNLAMT TPSSCIDESG FLQSSENLGS ENPQSNTFVK
801: VYKSGSFGRS LDISKFSSYH ELRSELARMF GLEGQLEDPV RSGWQLVFVD RENDVLLLGD DPWPEFVSSV WCIKILSPQE VQQMGKRGLE LLNSAPSSNN
901: VDKLPSNGNC DDFGNRSDPR NLGNGIASVG GSFNY

Arabidopsis Description

ARF6Auxin response factor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZTX8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.