Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G252000.2 | Wheat | nucleus | 95.84 | 95.49 |
| TraesCS7D01G250100.4 | Wheat | nucleus | 96.03 | 95.24 |
| TraesCS7B01G138900.6 | Wheat | nucleus | 95.75 | 94.79 |
| Os08t0520500-01 | Rice | cytosol | 3.79 | 82.0 |
| Os08t0520550-01 | Rice | nucleus | 47.18 | 80.22 |
| EES15359 | Sorghum | nucleus | 77.19 | 76.35 |
| Zm00001d031522_P007 | Maize | nucleus | 75.99 | 75.78 |
| VIT_11s0065g00310.t01 | Wine grape | nucleus | 57.16 | 55.52 |
| GSMUA_Achr6P01740_001 | Banana | nucleus | 51.25 | 53.42 |
| Solyc07g016180.2.1 | Tomato | nucleus | 54.76 | 53.33 |
| HORVU6Hr1G020330.30 | Barley | nucleus | 56.05 | 53.2 |
| PGSC0003DMT400025312 | Potato | nucleus | 54.57 | 53.05 |
| KRH49070 | Soybean | nucleus | 53.83 | 52.52 |
| PGSC0003DMT400035592 | Potato | nucleus | 52.08 | 51.41 |
| KRH74145 | Soybean | nucleus | 52.26 | 51.27 |
| Solyc05g047460.2.1 | Tomato | nucleus | 51.89 | 51.23 |
| HORVU7Hr1G096460.7 | Barley | mitochondrion, nucleus, vacuole | 56.14 | 50.58 |
| KRH60117 | Soybean | nucleus | 48.85 | 48.13 |
| KRH41404 | Soybean | nucleus | 48.57 | 47.26 |
| HORVU7Hr1G033820.5 | Barley | nucleus | 41.55 | 42.21 |
| HORVU2Hr1G121110.32 | Barley | nucleus | 32.23 | 41.65 |
| HORVU7Hr1G106280.1 | Barley | nucleus | 35.36 | 40.83 |
| HORVU6Hr1G026730.9 | Barley | nucleus | 34.9 | 40.69 |
| HORVU5Hr1G009650.20 | Barley | nucleus | 32.59 | 39.62 |
| HORVU2Hr1G076920.3 | Barley | nucleus | 21.7 | 35.18 |
| HORVU2Hr1G109650.18 | Barley | nucleus | 30.93 | 35.01 |
| HORVU3Hr1G097200.10 | Barley | nucleus | 22.99 | 29.47 |
| HORVU3Hr1G096410.4 | Barley | nucleus, plastid | 21.7 | 29.23 |
| HORVU3Hr1G096510.3 | Barley | plastid | 21.88 | 28.42 |
| HORVU3Hr1G032230.6 | Barley | nucleus, plastid | 19.85 | 26.88 |
Protein Annotations
| MapMan:15.5.5.1 | Gene3D:2.30.30.1040 | Gene3D:2.40.330.10 | Gene3D:3.10.20.90 | EMBL:AK374613 | InterPro:AUX/IAA_dom |
| InterPro:Auxin_resp | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf | UniProt:F2EEN7 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009725 | GO:GO:0009734 |
| GO:GO:0009987 | EnsemblPlantsGene:HORVU7Hr1G051930 | EnsemblPlants:HORVU7Hr1G051930.4 | InterPro:IPR000270 | InterPro:IPR003340 | InterPro:IPR015300 |
| InterPro:PB1_dom | PFAM:PF02309 | PFAM:PF02362 | PFAM:PF06507 | PFscan:PS50863 | PFscan:PS51745 |
| PANTHER:PTHR31384 | PANTHER:PTHR31384:SF18 | SMART:SM01019 | SUPFAM:SSF101936 | SUPFAM:SSF54277 | UniParc:UPI00020088CD |
| SEG:seg | : | : | : | : | : |
Description
Auxin response factor [Source:UniProtKB/TrEMBL;Acc:F2EEN7]
Coordinates
chrchr7H:-:196771561..196779677
Molecular Weight (calculated)
120285.0 Da
IEP (calculated)
6.427
GRAVY (calculated)
-0.506
Length
1083 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAPEGSGAG GGEGPRGSRV NQELWYACAG PLVALPPPGS LVVYFPQGHS EQVAASMRKD ADAQIPSYPN LPSKLICILH SVTMQSDPET DEVYARMTLQ
0101: PVSNVTQCDK EILLASELAL KQNKPQTEFF CKTLTASDTS THGGFSVPRR AAERIFPRLD FSLQPPAQEL QARDLHDTIW TFRHIFRGQP KRHLLTTGWS
0201: LFISGKRLIA GDSVLFIRDA KQQLLLGIRR ANRQPTNLSS SVLSSDSMHI GVLAAAAHAA ANNSQFTIFY NPRASPSEFV IPFAKYQKAV YGNQLSLGMR
0301: FRMMFETEES GTRRYMGTIT GISDLDPVRW KNSQWRNIQV AWDEAAPSER RTRVSLWDIE PVIAPFFIYP TPLFTAKRAR QPGMIDDDTS GMDNLFKRTM
0401: PWLGEEICKK DMNTQNSIVP GLNLAQSVQW MNMQQNLSLA GTVMQPELLN SLAGKHVQNL SAADISRQIS FQPQFLQQNN IQFDTSLLPQ QNQQAEQLAK
0501: AIATPNQLEN IMAPQKVDQD CYSDQKQRAV TQTVQGSQAN LNITQPEHVV QAQFEQPQVI LQAQLQQQQP LVQSHTIFQG GLQEIQVLQQ QQQPQHHQQV
0601: QHSVQEQQQM KIRPVHVPSD ANMNTQLSSD HQMKLQLLKA LHSQQHLTME QQKMLFDLQQ QVINSQSNPQ QRVQGATQTV GFHNSNTIQY ATQQKAQSHQ
0701: PIEGSPGGTI PVAKSDTITS IGASSLNVTS RMQLVRTDNV PSSSTSPSTT TNPVLLHSIP SSSKNQSLPT AAKTSQSSVG LGSTIEQEMK HYQSVKPTIM
0801: IPKMIEQGPA TERDYINNPH MDYLDTSSSA TSVCLSQADG SLQQNFPSSS FDQHQLLRDT APDSEFEISD PTNNLLFGVN IDGQLGLPLN ADALLANSIE
0901: NDKFMDEMAG NGISNYISSK DSQQELSSSM ISHSLGVADM GFNSIDSATN DPPFLNRNSR APAPAHQRMR TYTKVHKRGA VGRSIDMNRY SGYDELKHDI
1001: ARMFGIEGQL GDQSRVGWKL VYEDHEKDVL LVGDDPWEDF LNCVRCIRIL SPQEEMQMRL VGDFGDGFLP NQACSSSDGG QPW
0101: PVSNVTQCDK EILLASELAL KQNKPQTEFF CKTLTASDTS THGGFSVPRR AAERIFPRLD FSLQPPAQEL QARDLHDTIW TFRHIFRGQP KRHLLTTGWS
0201: LFISGKRLIA GDSVLFIRDA KQQLLLGIRR ANRQPTNLSS SVLSSDSMHI GVLAAAAHAA ANNSQFTIFY NPRASPSEFV IPFAKYQKAV YGNQLSLGMR
0301: FRMMFETEES GTRRYMGTIT GISDLDPVRW KNSQWRNIQV AWDEAAPSER RTRVSLWDIE PVIAPFFIYP TPLFTAKRAR QPGMIDDDTS GMDNLFKRTM
0401: PWLGEEICKK DMNTQNSIVP GLNLAQSVQW MNMQQNLSLA GTVMQPELLN SLAGKHVQNL SAADISRQIS FQPQFLQQNN IQFDTSLLPQ QNQQAEQLAK
0501: AIATPNQLEN IMAPQKVDQD CYSDQKQRAV TQTVQGSQAN LNITQPEHVV QAQFEQPQVI LQAQLQQQQP LVQSHTIFQG GLQEIQVLQQ QQQPQHHQQV
0601: QHSVQEQQQM KIRPVHVPSD ANMNTQLSSD HQMKLQLLKA LHSQQHLTME QQKMLFDLQQ QVINSQSNPQ QRVQGATQTV GFHNSNTIQY ATQQKAQSHQ
0701: PIEGSPGGTI PVAKSDTITS IGASSLNVTS RMQLVRTDNV PSSSTSPSTT TNPVLLHSIP SSSKNQSLPT AAKTSQSSVG LGSTIEQEMK HYQSVKPTIM
0801: IPKMIEQGPA TERDYINNPH MDYLDTSSSA TSVCLSQADG SLQQNFPSSS FDQHQLLRDT APDSEFEISD PTNNLLFGVN IDGQLGLPLN ADALLANSIE
0901: NDKFMDEMAG NGISNYISSK DSQQELSSSM ISHSLGVADM GFNSIDSATN DPPFLNRNSR APAPAHQRMR TYTKVHKRGA VGRSIDMNRY SGYDELKHDI
1001: ARMFGIEGQL GDQSRVGWKL VYEDHEKDVL LVGDDPWEDF LNCVRCIRIL SPQEEMQMRL VGDFGDGFLP NQACSSSDGG QPW
0001: MKAPSNGFLP SSNEGEKKPI NSQLWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMQKQ TDFIPNYPNL PSKLICLLHS VTLHADTETD EVYAQMTLQP
0101: VNKYDREALL ASDMGLKLNR QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIVAKD LHDTTWTFRH IYRGQPKRHL LTTGWSVFVS
0201: TKRLFAGDSV LFVRDEKSQL MLGIRRANRQ TPTLSSSVIS SDSMHIGILA AAAHANANSS PFTIFFNPRA SPSEFVVPLA KYNKALYAQV SLGMRFRMMF
0301: ETEDCGVRRY MGTVTGISDL DPVRWKGSQW RNLQVGWDES TAGDRPSRVS IWEIEPVITP FYICPPPFFR PKYPRQPGMP DDELDMENAF KRAMPWMGED
0401: FGMKDAQSSM FPGLSLVQWM SMQQNNPLSG SATPQLPSAL SSFNLPNNFA SNDPSKLLNF QSPNLSSANS QFNKPNTVNH ISQQMQAQPA MVKSQQQQQQ
0501: QQQQHQHQQQ QLQQQQQLQM SQQQVQQQGI YNNGTIAVAN QVSCQSPNQP TGFSQSQLQQ QSMLPTGAKM THQNINSMGN KGLSQMTSFA QEMQFQQQLE
0601: MHNSSQLLRN QQEQSSLHSL QQNLSQNPQQ LQMQQQSSKP SPSQQLQLQL LQKLQQQQQQ QSIPPVSSSL QPQLSALQQT QSHQLQQLLS SQNQQPLAHG
0701: NNSFPASTFM QPPQIQVSPQ QQGQMSNKNL VAAGRSHSGH TDGEAPSCST SPSANNTGHD NVSPTNFLSR NQQQGQAASV SASDSVFERA SNPVQELYTK
0801: TESRISQGMM NMKSAGEHFR FKSAVTDQID VSTAGTTYCP DVVGPVQQQQ TFPLPSFGFD GDCQSHHPRN NLAFPGNLEA VTSDPLYSQK DFQNLVPNYG
0901: NTPRDIETEL SSAAISSQSF GIPSIPFKPG CSNEVGGIND SGIMNGGGLW PNQTQRMRTY TKVQKRGSVG RSIDVTRYSG YDELRHDLAR MFGIEGQLED
1001: PLTSDWKLVY TDHENDILLV GDDPWEEFVN CVQNIKILSS VEVQQMSLDG DLAAIPTTNQ ACSETDSGNA WKVHYEDTSA AASFNR
0101: VNKYDREALL ASDMGLKLNR QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIVAKD LHDTTWTFRH IYRGQPKRHL LTTGWSVFVS
0201: TKRLFAGDSV LFVRDEKSQL MLGIRRANRQ TPTLSSSVIS SDSMHIGILA AAAHANANSS PFTIFFNPRA SPSEFVVPLA KYNKALYAQV SLGMRFRMMF
0301: ETEDCGVRRY MGTVTGISDL DPVRWKGSQW RNLQVGWDES TAGDRPSRVS IWEIEPVITP FYICPPPFFR PKYPRQPGMP DDELDMENAF KRAMPWMGED
0401: FGMKDAQSSM FPGLSLVQWM SMQQNNPLSG SATPQLPSAL SSFNLPNNFA SNDPSKLLNF QSPNLSSANS QFNKPNTVNH ISQQMQAQPA MVKSQQQQQQ
0501: QQQQHQHQQQ QLQQQQQLQM SQQQVQQQGI YNNGTIAVAN QVSCQSPNQP TGFSQSQLQQ QSMLPTGAKM THQNINSMGN KGLSQMTSFA QEMQFQQQLE
0601: MHNSSQLLRN QQEQSSLHSL QQNLSQNPQQ LQMQQQSSKP SPSQQLQLQL LQKLQQQQQQ QSIPPVSSSL QPQLSALQQT QSHQLQQLLS SQNQQPLAHG
0701: NNSFPASTFM QPPQIQVSPQ QQGQMSNKNL VAAGRSHSGH TDGEAPSCST SPSANNTGHD NVSPTNFLSR NQQQGQAASV SASDSVFERA SNPVQELYTK
0801: TESRISQGMM NMKSAGEHFR FKSAVTDQID VSTAGTTYCP DVVGPVQQQQ TFPLPSFGFD GDCQSHHPRN NLAFPGNLEA VTSDPLYSQK DFQNLVPNYG
0901: NTPRDIETEL SSAAISSQSF GIPSIPFKPG CSNEVGGIND SGIMNGGGLW PNQTQRMRTY TKVQKRGSVG RSIDVTRYSG YDELRHDLAR MFGIEGQLED
1001: PLTSDWKLVY TDHENDILLV GDDPWEEFVN CVQNIKILSS VEVQQMSLDG DLAAIPTTNQ ACSETDSGNA WKVHYEDTSA AASFNR
Arabidopsis Description
ARF19Auxin response factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q8RYC8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.