Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d031522_P007 | Maize | nucleus | 84.0 | 3.87 |
| EES15359 | Sorghum | nucleus | 84.0 | 3.84 |
| HORVU7Hr1G051930.4 | Barley | nucleus | 82.0 | 3.79 |
| TraesCS7A01G252000.2 | Wheat | nucleus | 82.0 | 3.77 |
| TraesCS7D01G250100.4 | Wheat | nucleus | 82.0 | 3.75 |
| TraesCS7B01G138900.6 | Wheat | nucleus | 82.0 | 3.75 |
| Os06t0702600-01 | Rice | nucleus | 66.0 | 3.33 |
| Os02t0141100-00 | Rice | nucleus | 68.0 | 3.05 |
| KRH74145 | Soybean | nucleus | 64.0 | 2.9 |
| KRH49070 | Soybean | nucleus | 62.0 | 2.79 |
| VIT_11s0065g00310.t01 | Wine grape | nucleus | 62.0 | 2.78 |
| Solyc05g047460.2.1 | Tomato | nucleus | 60.0 | 2.73 |
| GSMUA_Achr6P01740_001 | Banana | nucleus | 56.0 | 2.69 |
| PGSC0003DMT400035592 | Potato | nucleus | 58.0 | 2.64 |
| KRH60117 | Soybean | nucleus | 58.0 | 2.64 |
| Solyc07g016180.2.1 | Tomato | nucleus | 58.0 | 2.61 |
| PGSC0003DMT400025312 | Potato | nucleus | 58.0 | 2.6 |
| KRH41404 | Soybean | nucleus | 56.0 | 2.52 |
| Os06t0677800-01 | Rice | nucleus | 36.0 | 1.96 |
| Os12t0613700-01 | Rice | nucleus | 32.0 | 1.78 |
| Os02t0164900-01 | Rice | nucleus | 32.0 | 1.76 |
| Os06t0196700-02 | Rice | nucleus | 36.0 | 1.71 |
| Os02t0557200-01 | Rice | nucleus | 22.0 | 1.62 |
| Os04t0442000-01 | Rice | nucleus | 20.0 | 1.49 |
| Os01t0236300-01 | Rice | nucleus | 20.0 | 1.43 |
| Os04t0671900-01 | Rice | nucleus | 20.0 | 1.22 |
| Os01t0927600-01 | Rice | nucleus | 18.0 | 1.11 |
| Os12t0479400-02 | Rice | nucleus | 16.0 | 0.95 |
| Os08t0520550-01 | Rice | nucleus | 0.0 | 0.0 |
| Os11t0523800-01 | Rice | nucleus | 0.0 | 0.0 |
| Os04t0664400-01 | Rice | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os08t0520500-01 | EnsemblPlantsGene:Os08g0520500 | PANTHER:PTHR31384 | PANTHER:PTHR31384:SF18 | ProteinID:BAT06293.1 | UniParc:UPI000393C586 |
| UniProt:A0A0P0XIJ3 | MapMan:35.1 | : | : | : | : |
Description
AUXIN RESPONSE FACTOR 7BSimilar to Isoform 2 of Auxin response factor 21. (Os08t0520500-01)
Coordinates
chr8:-:25870837..25871444
Molecular Weight (calculated)
5600.6 Da
IEP (calculated)
4.766
GRAVY (calculated)
-0.340
Length
50 amino acids
Sequence
(BLAST)
(BLAST)
1: DFVKCVRCIR ILSPQEEMQM RLVGDFGDSF LPNQACSSSD GGHPWRITGD
0001: MKAPSSNGVS PNPVEGERRN INSELWHACA GPLISLPPAG SLVVYFPQGH SEQVAASMQK QTDFIPSYPN LPSKLICMLH NVTLNADPET DEVYAQMTLQ
0101: PVNKYDRDAL LASDMGLKLN RQPNEFFCKT LTASDTSTHG GFSVPRRAAE KIFPALDFSM QPPCQELVAK DIHDNTWTFR HIYRGQPKRH LLTTGWSVFV
0201: STKRLFAGDS VLFIRDGKAQ LLLGIRRANR QQPALSSSVI SSDSMHIGVL AAAAHANANN SPFTIFYNPR WAAPAEFVVP LAKYTKAMYA QVSLGMRFRM
0301: IFETEECGVR RYMGTVTGIS DLDPVRWKNS QWRNLQIGWD ESAAGDRPSR VSVWDIEPVL TPFYICPPPF FRPRFSGQPG MPDDETDMES ALKRAMPWLD
0401: NSLEMKDPSS TIFPGLSLVQ WMNMQQQNGQ LPSAAAQPGF FPSMLSPTAA LHNNLGGTDD PSKLLSFQTP HGGISSSNLQ FNKQNQQAPM SQLPQPPTTL
0501: SQQQQLQQLL HSSLNHQQQQ SQSQQQQQQQ QLLQQQQQLQ SQQHSNNNQS QSQQQQQLLQ QQQQQQLQQQ HQQPLQQQTQ QQQLRTQPLQ SHSHPQPQQL
0601: QQHKLQQLQV PQNQLYNGQQ AAQQHQSQQA STHHLQPQLV SGSMASSVIT PPSSSLNQSF QQQQQQSKQL QQAHHHLGAS TSQSSVIETS KSSSNLMSAP
0701: PQETQFSRQV EQQQPPGLNG QNQQTLLQQK AHQAQAQQIF QQSLLEQPHI QFQLLQRLQQ QQQQQFLSPQ SQLPHHQLQS QQLQQLPTLS QGHQFPSSCT
0801: NNGLSTLQPP QMLVSRPQEK QNPPVGGGVK AYSGITDGGD APSSSTSPST NNCQISSSGF LNRSQSGPAI LIPDAAIDMS GNLVQDLYSK SDMRLKQELV
0901: GQQKSKASLT DHQLEASASG TSYGLDGGEN NRQQNFLAPT FGLDGDSRNS LLGGANVDNG FVPDTLLSRG YDSQKDLQNM LSNYGGVTND IGTEMSTSAV
1001: RTQSFGVPNV PAISNDLAVN DAGVLGGGLW PAQTQRMRTY TKVQKRGSVG RSIDVNRYRG YDELRHDLAR MFGIEGQLED PQTSDWKLVY VDHENDILLV
1101: GDDPWEEFVN CVQSIKILSS AEVQQMSLDG NFAGVPVTNQ ACSGGDSGNA WRGHYDDNSA TSFNR
0101: PVNKYDRDAL LASDMGLKLN RQPNEFFCKT LTASDTSTHG GFSVPRRAAE KIFPALDFSM QPPCQELVAK DIHDNTWTFR HIYRGQPKRH LLTTGWSVFV
0201: STKRLFAGDS VLFIRDGKAQ LLLGIRRANR QQPALSSSVI SSDSMHIGVL AAAAHANANN SPFTIFYNPR WAAPAEFVVP LAKYTKAMYA QVSLGMRFRM
0301: IFETEECGVR RYMGTVTGIS DLDPVRWKNS QWRNLQIGWD ESAAGDRPSR VSVWDIEPVL TPFYICPPPF FRPRFSGQPG MPDDETDMES ALKRAMPWLD
0401: NSLEMKDPSS TIFPGLSLVQ WMNMQQQNGQ LPSAAAQPGF FPSMLSPTAA LHNNLGGTDD PSKLLSFQTP HGGISSSNLQ FNKQNQQAPM SQLPQPPTTL
0501: SQQQQLQQLL HSSLNHQQQQ SQSQQQQQQQ QLLQQQQQLQ SQQHSNNNQS QSQQQQQLLQ QQQQQQLQQQ HQQPLQQQTQ QQQLRTQPLQ SHSHPQPQQL
0601: QQHKLQQLQV PQNQLYNGQQ AAQQHQSQQA STHHLQPQLV SGSMASSVIT PPSSSLNQSF QQQQQQSKQL QQAHHHLGAS TSQSSVIETS KSSSNLMSAP
0701: PQETQFSRQV EQQQPPGLNG QNQQTLLQQK AHQAQAQQIF QQSLLEQPHI QFQLLQRLQQ QQQQQFLSPQ SQLPHHQLQS QQLQQLPTLS QGHQFPSSCT
0801: NNGLSTLQPP QMLVSRPQEK QNPPVGGGVK AYSGITDGGD APSSSTSPST NNCQISSSGF LNRSQSGPAI LIPDAAIDMS GNLVQDLYSK SDMRLKQELV
0901: GQQKSKASLT DHQLEASASG TSYGLDGGEN NRQQNFLAPT FGLDGDSRNS LLGGANVDNG FVPDTLLSRG YDSQKDLQNM LSNYGGVTND IGTEMSTSAV
1001: RTQSFGVPNV PAISNDLAVN DAGVLGGGLW PAQTQRMRTY TKVQKRGSVG RSIDVNRYRG YDELRHDLAR MFGIEGQLED PQTSDWKLVY VDHENDILLV
1101: GDDPWEEFVN CVQSIKILSS AEVQQMSLDG NFAGVPVTNQ ACSGGDSGNA WRGHYDDNSA TSFNR
Arabidopsis Description
NPH4Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related [Source:TAIR;Acc:AT5G20730]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.