Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G250100.4 | Wheat | nucleus | 98.08 | 98.26 |
| TraesCS7A01G252000.2 | Wheat | nucleus | 97.44 | 98.07 |
| HORVU7Hr1G051930.4 | Barley | nucleus | 94.79 | 95.75 |
| Os08t0520550-01 | Rice | nucleus | 47.81 | 82.1 |
| Os08t0520500-01 | Rice | cytosol | 3.75 | 82.0 |
| EES15359 | Sorghum | nucleus | 77.42 | 77.35 |
| Zm00001d031522_P007 | Maize | nucleus | 76.14 | 76.7 |
| VIT_11s0065g00310.t01 | Wine grape | nucleus | 56.76 | 55.7 |
| Solyc07g016180.2.1 | Tomato | nucleus | 54.75 | 53.87 |
| TraesCS6B01G141300.2 | Wheat | nucleus | 55.67 | 53.85 |
| GSMUA_Achr6P01740_001 | Banana | nucleus | 51.01 | 53.71 |
| PGSC0003DMT400025312 | Potato | nucleus | 54.48 | 53.5 |
| TraesCS7B01G316600.1 | Wheat | nucleus | 56.86 | 52.98 |
| KRH49070 | Soybean | nucleus | 53.56 | 52.79 |
| PGSC0003DMT400035592 | Potato | nucleus | 52.1 | 51.96 |
| Solyc05g047460.2.1 | Tomato | nucleus | 52.01 | 51.87 |
| KRH74145 | Soybean | nucleus | 51.92 | 51.45 |
| KRH60117 | Soybean | nucleus | 48.72 | 48.5 |
| KRH41404 | Soybean | nucleus | 48.54 | 47.71 |
| TraesCS7B01G065800.2 | Wheat | plastid | 42.78 | 43.29 |
| TraesCS7B01G363100.1 | Wheat | nucleus | 35.47 | 42.68 |
| TraesCS2B01G578500.1 | Wheat | nucleus | 31.81 | 41.78 |
| TraesCS6B01G167100.1 | Wheat | nucleus | 34.55 | 40.78 |
| TraesCS5B01G039800.1 | Wheat | nucleus | 32.45 | 39.84 |
| TraesCS2B01G326400.1 | Wheat | nucleus | 21.3 | 35.63 |
| TraesCS2B01G519200.2 | Wheat | nucleus | 30.9 | 35.39 |
| TraesCS3B01G475800.1 | Wheat | nucleus | 23.58 | 32.41 |
| TraesCS3B01G486000.2 | Wheat | nucleus | 22.76 | 30.15 |
| TraesCS3B01G190100.1 | Wheat | nucleus | 19.84 | 28.63 |
Protein Annotations
| MapMan:15.5.5.1 | Gene3D:2.30.30.1040 | Gene3D:2.40.330.10 | Gene3D:3.10.20.90 | InterPro:AUX/IAA_dom | InterPro:Auxin_resp |
| InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009725 |
| GO:GO:0009987 | InterPro:IPR000270 | InterPro:IPR003340 | InterPro:IPR015300 | InterPro:PB1_dom | PFAM:PF02309 |
| PFAM:PF02362 | PFAM:PF06507 | PFscan:PS50863 | PFscan:PS51745 | PANTHER:PTHR31384 | PANTHER:PTHR31384:SF18 |
| SMART:SM01019 | SUPFAM:SSF101936 | SUPFAM:SSF54277 | EnsemblPlantsGene:TraesCS7B01G138900 | EnsemblPlants:TraesCS7B01G138900.6 | TIGR:cd10017 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr7B:-:174568477..174574636
Molecular Weight (calculated)
121395.0 Da
IEP (calculated)
6.510
GRAVY (calculated)
-0.502
Length
1094 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAPEGSGAG GGEGARGSKV NQELWYACAG PLVALPPPGS LVVYFPQGHS EQVAASMRKD ADAQIPSYPN LPSKLICILH SVTMQSDPDT DEVYARMTLQ
0101: PVSNVTQCDK EILLASELAL KQNKPQTEFF CKTLTASDTS THGGFSVPRR AAERIFPRLD FSLQPPAQEL QARDLHDTIW TFRHIFRGQP KRHLLTTGWS
0201: LFISGKRLLA GDSVLFIRDA KQQLLLGIRR ANRQPTNLSS SVLSSDSMHI GVLAAAAHAA ANNSQFTIFY NPRASPSEFV IPFAKYQKAV YGNQLSLGMR
0301: FRMMFETEES GTRRYMGTIT GISDLDPVRW KNSQWRNIQV AWDEAAPSER RTRVSLWDIE PVIAPFFIYP TPLFTAKCAR QPGMIDDDTS GMDNVFKRTM
0401: PWLGEEICKK DMNTQNSIVP GLNLAQSLQW MNMQQNLSLA GTVMQPELLN SLAGKHVQNL SAADISRQIS FQPQFLQQNN IQFSTSLLPQ QNQQAEQLAK
0501: AIGTPNQLGN IMVPQKVDQD CNSDQKQHTV TQSVQGSQAN LNVTQPEHVV QAQFQQPRVI LQAQLQQQQP LVQSHTVFQG GLQQIQVLQQ QQPHLQQQLQ
0601: QQQPQHHQQV QHSVQEQQQM KTQPVHVSSD VNMNTQLSDH QMKLQLLKAL HSQQHLTMEQ QKMLFDLQQQ VVNSQSDPQQ CVQGATQTVG FHNRNTIQYA
0701: TQQKAQSHQP VEDSPRGTIP VAKSDVVTSM GASSLNVAGR MQSVRTDNVP SSSTSPSPST ATNHVLLQSI PSSSKNQSLP TAAKTSQSSV VLGPTIEQEM
0801: KSYQSVKPTI MIPKMIEQGP ATERDYINNP HMDYLDTSSS ATSVCLSQAD GSLQQNFPSS SFDQHQLLRD TAPDSEFEIS DPTNNLLFGV NIDGQLGLPL
0901: NADALLANSI ENDKFMDEMA GNGISNYISS KDSQQELSSS MISHSLGVAD MGFNSIDSAI NDPSFLNRNS RAPAPAHQRM RTYTKVHKRG AVGRSIDMNR
1001: YSGYDELKHD IARMFGIEGQ LGDQSRVGWK LVYEDHEKDV LLVGDDPWED FLNCVRCIRI LSPQEEMQMR LVGDFGDGFL PNQACSSSDG GQPW
0101: PVSNVTQCDK EILLASELAL KQNKPQTEFF CKTLTASDTS THGGFSVPRR AAERIFPRLD FSLQPPAQEL QARDLHDTIW TFRHIFRGQP KRHLLTTGWS
0201: LFISGKRLLA GDSVLFIRDA KQQLLLGIRR ANRQPTNLSS SVLSSDSMHI GVLAAAAHAA ANNSQFTIFY NPRASPSEFV IPFAKYQKAV YGNQLSLGMR
0301: FRMMFETEES GTRRYMGTIT GISDLDPVRW KNSQWRNIQV AWDEAAPSER RTRVSLWDIE PVIAPFFIYP TPLFTAKCAR QPGMIDDDTS GMDNVFKRTM
0401: PWLGEEICKK DMNTQNSIVP GLNLAQSLQW MNMQQNLSLA GTVMQPELLN SLAGKHVQNL SAADISRQIS FQPQFLQQNN IQFSTSLLPQ QNQQAEQLAK
0501: AIGTPNQLGN IMVPQKVDQD CNSDQKQHTV TQSVQGSQAN LNVTQPEHVV QAQFQQPRVI LQAQLQQQQP LVQSHTVFQG GLQQIQVLQQ QQPHLQQQLQ
0601: QQQPQHHQQV QHSVQEQQQM KTQPVHVSSD VNMNTQLSDH QMKLQLLKAL HSQQHLTMEQ QKMLFDLQQQ VVNSQSDPQQ CVQGATQTVG FHNRNTIQYA
0701: TQQKAQSHQP VEDSPRGTIP VAKSDVVTSM GASSLNVAGR MQSVRTDNVP SSSTSPSPST ATNHVLLQSI PSSSKNQSLP TAAKTSQSSV VLGPTIEQEM
0801: KSYQSVKPTI MIPKMIEQGP ATERDYINNP HMDYLDTSSS ATSVCLSQAD GSLQQNFPSS SFDQHQLLRD TAPDSEFEIS DPTNNLLFGV NIDGQLGLPL
0901: NADALLANSI ENDKFMDEMA GNGISNYISS KDSQQELSSS MISHSLGVAD MGFNSIDSAI NDPSFLNRNS RAPAPAHQRM RTYTKVHKRG AVGRSIDMNR
1001: YSGYDELKHD IARMFGIEGQ LGDQSRVGWK LVYEDHEKDV LLVGDDPWED FLNCVRCIRI LSPQEEMQMR LVGDFGDGFL PNQACSSSDG GQPW
0001: MKAPSNGFLP SSNEGEKKPI NSQLWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMQKQ TDFIPNYPNL PSKLICLLHS VTLHADTETD EVYAQMTLQP
0101: VNKYDREALL ASDMGLKLNR QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIVAKD LHDTTWTFRH IYRGQPKRHL LTTGWSVFVS
0201: TKRLFAGDSV LFVRDEKSQL MLGIRRANRQ TPTLSSSVIS SDSMHIGILA AAAHANANSS PFTIFFNPRA SPSEFVVPLA KYNKALYAQV SLGMRFRMMF
0301: ETEDCGVRRY MGTVTGISDL DPVRWKGSQW RNLQVGWDES TAGDRPSRVS IWEIEPVITP FYICPPPFFR PKYPRQPGMP DDELDMENAF KRAMPWMGED
0401: FGMKDAQSSM FPGLSLVQWM SMQQNNPLSG SATPQLPSAL SSFNLPNNFA SNDPSKLLNF QSPNLSSANS QFNKPNTVNH ISQQMQAQPA MVKSQQQQQQ
0501: QQQQHQHQQQ QLQQQQQLQM SQQQVQQQGI YNNGTIAVAN QVSCQSPNQP TGFSQSQLQQ QSMLPTGAKM THQNINSMGN KGLSQMTSFA QEMQFQQQLE
0601: MHNSSQLLRN QQEQSSLHSL QQNLSQNPQQ LQMQQQSSKP SPSQQLQLQL LQKLQQQQQQ QSIPPVSSSL QPQLSALQQT QSHQLQQLLS SQNQQPLAHG
0701: NNSFPASTFM QPPQIQVSPQ QQGQMSNKNL VAAGRSHSGH TDGEAPSCST SPSANNTGHD NVSPTNFLSR NQQQGQAASV SASDSVFERA SNPVQELYTK
0801: TESRISQGMM NMKSAGEHFR FKSAVTDQID VSTAGTTYCP DVVGPVQQQQ TFPLPSFGFD GDCQSHHPRN NLAFPGNLEA VTSDPLYSQK DFQNLVPNYG
0901: NTPRDIETEL SSAAISSQSF GIPSIPFKPG CSNEVGGIND SGIMNGGGLW PNQTQRMRTY TKVQKRGSVG RSIDVTRYSG YDELRHDLAR MFGIEGQLED
1001: PLTSDWKLVY TDHENDILLV GDDPWEEFVN CVQNIKILSS VEVQQMSLDG DLAAIPTTNQ ACSETDSGNA WKVHYEDTSA AASFNR
0101: VNKYDREALL ASDMGLKLNR QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIVAKD LHDTTWTFRH IYRGQPKRHL LTTGWSVFVS
0201: TKRLFAGDSV LFVRDEKSQL MLGIRRANRQ TPTLSSSVIS SDSMHIGILA AAAHANANSS PFTIFFNPRA SPSEFVVPLA KYNKALYAQV SLGMRFRMMF
0301: ETEDCGVRRY MGTVTGISDL DPVRWKGSQW RNLQVGWDES TAGDRPSRVS IWEIEPVITP FYICPPPFFR PKYPRQPGMP DDELDMENAF KRAMPWMGED
0401: FGMKDAQSSM FPGLSLVQWM SMQQNNPLSG SATPQLPSAL SSFNLPNNFA SNDPSKLLNF QSPNLSSANS QFNKPNTVNH ISQQMQAQPA MVKSQQQQQQ
0501: QQQQHQHQQQ QLQQQQQLQM SQQQVQQQGI YNNGTIAVAN QVSCQSPNQP TGFSQSQLQQ QSMLPTGAKM THQNINSMGN KGLSQMTSFA QEMQFQQQLE
0601: MHNSSQLLRN QQEQSSLHSL QQNLSQNPQQ LQMQQQSSKP SPSQQLQLQL LQKLQQQQQQ QSIPPVSSSL QPQLSALQQT QSHQLQQLLS SQNQQPLAHG
0701: NNSFPASTFM QPPQIQVSPQ QQGQMSNKNL VAAGRSHSGH TDGEAPSCST SPSANNTGHD NVSPTNFLSR NQQQGQAASV SASDSVFERA SNPVQELYTK
0801: TESRISQGMM NMKSAGEHFR FKSAVTDQID VSTAGTTYCP DVVGPVQQQQ TFPLPSFGFD GDCQSHHPRN NLAFPGNLEA VTSDPLYSQK DFQNLVPNYG
0901: NTPRDIETEL SSAAISSQSF GIPSIPFKPG CSNEVGGIND SGIMNGGGLW PNQTQRMRTY TKVQKRGSVG RSIDVTRYSG YDELRHDLAR MFGIEGQLED
1001: PLTSDWKLVY TDHENDILLV GDDPWEEFVN CVQNIKILSS VEVQQMSLDG DLAAIPTTNQ ACSETDSGNA WKVHYEDTSA AASFNR
Arabidopsis Description
ARF19Auxin response factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q8RYC8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.