Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G416400.1 | Wheat | nucleus | 97.96 | 98.04 |
| TraesCS7D01G409700.1 | Wheat | nucleus | 98.04 | 97.96 |
| HORVU7Hr1G096460.7 | Barley | mitochondrion, nucleus, vacuole | 91.65 | 89.52 |
| Os06t0702600-01 | Rice | nucleus | 72.83 | 86.28 |
| EER90336 | Sorghum | nucleus | 81.35 | 82.4 |
| Zm00001d014690_P014 | Maize | nucleus | 79.56 | 78.22 |
| TraesCS6B01G141300.2 | Wheat | nucleus | 70.78 | 73.47 |
| GSMUA_Achr3P05460_001 | Banana | nucleus | 59.37 | 71.63 |
| GSMUA_Achr9P14090_001 | Banana | nucleus | 54.26 | 70.0 |
| GSMUA_Achr5P05010_001 | Banana | nucleus | 49.15 | 66.25 |
| GSMUA_Achr8P23850_001 | Banana | nucleus | 57.41 | 63.17 |
| VIT_11s0065g00310.t01 | Wine grape | nucleus | 56.81 | 59.82 |
| Solyc07g016180.2.1 | Tomato | nucleus | 55.62 | 58.72 |
| PGSC0003DMT400025312 | Potato | nucleus | 55.28 | 58.26 |
| TraesCS7B01G138900.6 | Wheat | nucleus | 52.98 | 56.86 |
| KRH49070 | Soybean | nucleus | 52.47 | 55.5 |
| Solyc05g047460.2.1 | Tomato | nucleus | 51.28 | 54.88 |
| KRH74145 | Soybean | nucleus | 51.53 | 54.8 |
| PGSC0003DMT400035592 | Potato | nucleus | 51.11 | 54.69 |
| KRH60117 | Soybean | nucleus | 48.55 | 51.87 |
| KRH41404 | Soybean | nucleus | 48.72 | 51.39 |
| TraesCS7B01G065800.2 | Wheat | plastid | 41.48 | 45.05 |
| TraesCS7B01G363100.1 | Wheat | nucleus | 34.84 | 44.99 |
| TraesCS6B01G167100.1 | Wheat | nucleus | 33.39 | 42.29 |
| TraesCS2B01G578500.1 | Wheat | nucleus | 29.9 | 42.14 |
| TraesCS5B01G039800.1 | Wheat | nucleus | 31.6 | 41.64 |
| TraesCS2B01G326400.1 | Wheat | nucleus | 20.19 | 36.24 |
| TraesCS2B01G519200.2 | Wheat | nucleus | 28.62 | 35.18 |
| TraesCS3B01G475800.1 | Wheat | nucleus | 22.23 | 32.79 |
| TraesCS3B01G486000.2 | Wheat | nucleus | 21.98 | 31.23 |
| TraesCS3B01G190100.1 | Wheat | nucleus | 19.68 | 30.47 |
Protein Annotations
| MapMan:15.5.5.1 | Gene3D:2.30.30.1040 | Gene3D:2.40.330.10 | Gene3D:3.10.20.90 | InterPro:AUX/IAA_dom | InterPro:Auxin_resp |
| InterPro:B3_DNA-bd | ncoils:Coil | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 |
| GO:GO:0009725 | GO:GO:0009987 | InterPro:IPR000270 | InterPro:IPR003340 | InterPro:IPR015300 | InterPro:PB1_dom |
| PFAM:PF02309 | PFAM:PF02362 | PFAM:PF06507 | PFscan:PS50863 | PFscan:PS51745 | PANTHER:PTHR31384 |
| PANTHER:PTHR31384:SF14 | SMART:SM01019 | SUPFAM:SSF101936 | SUPFAM:SSF54277 | EnsemblPlantsGene:TraesCS7B01G316600 | EnsemblPlants:TraesCS7B01G316600.1 |
| TIGR:cd10017 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr7B:-:565909270..565917298
Molecular Weight (calculated)
130830.0 Da
IEP (calculated)
6.688
GRAVY (calculated)
-0.608
Length
1174 amino acids
Sequence
(BLAST)
(BLAST)
0001: MMKMERQQPP PPASSVAGSA VTVAVPGAGC EGEKKAPAIN SDLWHACAGP LVQLPPAGSL IVYFPQGHSE QVAASMQKDV DAHVPNYPNL PSKLICLLHN
0101: ITLHADLETD EVYAQMTLQP VTSYGKEALQ LSELALKQAR PQNEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIQARD LHDNVWTFRH
0201: IYRGQPKRHL LTTGWSLFVS GKRLFAGDSV IFVRDERQQL LLGIRRANRQ PTNISSSVLS SDSMHIGILA AAAHAAANNS PFTIFYNPRA SPTEFVIPFA
0301: KYQKAVYGNQ LSLGMRFRMM FETEELGTRR YMGTITGIND LDPVRWKNSQ WRNLQVGWDE SAAGERRNRV SIWEIEPVAA PFFICPPPFF GAKRPRQLDD
0401: ESSEMENLLK RAMPWLGEEI CIKDPQTQNT IMPGLSLVQW MNMNMQQSSS FANTAMQSEY LRSITNPSMQ NIGSGDLSRQ LCLQNQLLQQ NNMQFNTPKL
0501: PHQMQPNNEL SKAALPLNQN GASIKPEEQT QDASNFQRQQ QSMNYALPLS QAQTSLAQAQ VLIQSQMQQQ QQQQQQPHIP QNQLPTASQP LLSHQQQQHH
0601: HHQQQHQQQE QQHQQQQQQK FLQQQQLLLQ QQQLQQHQHQ LQQQQQQQLS KMPAQLPNMS NQQLQLSDQQ LQLQLLQKLQ QQQQSLLSQP GVTLAQLPLI
0701: QEQQKLLMDM QQQLSSSHSL SQQQMMPQQS TKIPSHAASL PPPMQPDTTH QKLPQKQALP ADTLEAAIPT TTSLKFSSAN GSPLRMPGAT HSVVTEEIPS
0801: CSTSPSTANG NHLLQPVPGR DQYPSMINTE KAPHSTAPMS VPSSLDAVTG AQRMTKELPK LNSNVKQNMM PSKLPNGGAG PQNFANNAPP TDYLETASSA
0901: TSVWLSQADG LLHPNFPMSN FSQQQLFKDA PPDTEIPAEI PSNNALFGIS NDGHVGFPMV TDDFLTNGID AVKYENHIST DIDNNYRIPK DAQQEISSSM
1001: VSQSFGASDM AFNSIDSGIN NGAFLNKSSW PPAPPVKRMR TFTKVYKRGA VGRSIDISQY AGYEELKHAL ARMFSIEGQL EERQRIGWKL VYRDHEDDIL
1101: LLGDDPWEEF VNCVKCIRIL SPQEVQQMSL DGDLGSSVVP NQACSSSEGG GNAWRARCDQ NSGNPSTGSY DQFE
0101: ITLHADLETD EVYAQMTLQP VTSYGKEALQ LSELALKQAR PQNEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIQARD LHDNVWTFRH
0201: IYRGQPKRHL LTTGWSLFVS GKRLFAGDSV IFVRDERQQL LLGIRRANRQ PTNISSSVLS SDSMHIGILA AAAHAAANNS PFTIFYNPRA SPTEFVIPFA
0301: KYQKAVYGNQ LSLGMRFRMM FETEELGTRR YMGTITGIND LDPVRWKNSQ WRNLQVGWDE SAAGERRNRV SIWEIEPVAA PFFICPPPFF GAKRPRQLDD
0401: ESSEMENLLK RAMPWLGEEI CIKDPQTQNT IMPGLSLVQW MNMNMQQSSS FANTAMQSEY LRSITNPSMQ NIGSGDLSRQ LCLQNQLLQQ NNMQFNTPKL
0501: PHQMQPNNEL SKAALPLNQN GASIKPEEQT QDASNFQRQQ QSMNYALPLS QAQTSLAQAQ VLIQSQMQQQ QQQQQQPHIP QNQLPTASQP LLSHQQQQHH
0601: HHQQQHQQQE QQHQQQQQQK FLQQQQLLLQ QQQLQQHQHQ LQQQQQQQLS KMPAQLPNMS NQQLQLSDQQ LQLQLLQKLQ QQQQSLLSQP GVTLAQLPLI
0701: QEQQKLLMDM QQQLSSSHSL SQQQMMPQQS TKIPSHAASL PPPMQPDTTH QKLPQKQALP ADTLEAAIPT TTSLKFSSAN GSPLRMPGAT HSVVTEEIPS
0801: CSTSPSTANG NHLLQPVPGR DQYPSMINTE KAPHSTAPMS VPSSLDAVTG AQRMTKELPK LNSNVKQNMM PSKLPNGGAG PQNFANNAPP TDYLETASSA
0901: TSVWLSQADG LLHPNFPMSN FSQQQLFKDA PPDTEIPAEI PSNNALFGIS NDGHVGFPMV TDDFLTNGID AVKYENHIST DIDNNYRIPK DAQQEISSSM
1001: VSQSFGASDM AFNSIDSGIN NGAFLNKSSW PPAPPVKRMR TFTKVYKRGA VGRSIDISQY AGYEELKHAL ARMFSIEGQL EERQRIGWKL VYRDHEDDIL
1101: LLGDDPWEEF VNCVKCIRIL SPQEVQQMSL DGDLGSSVVP NQACSSSEGG GNAWRARCDQ NSGNPSTGSY DQFE
0001: MKAPSNGFLP SSNEGEKKPI NSQLWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMQKQ TDFIPNYPNL PSKLICLLHS VTLHADTETD EVYAQMTLQP
0101: VNKYDREALL ASDMGLKLNR QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIVAKD LHDTTWTFRH IYRGQPKRHL LTTGWSVFVS
0201: TKRLFAGDSV LFVRDEKSQL MLGIRRANRQ TPTLSSSVIS SDSMHIGILA AAAHANANSS PFTIFFNPRA SPSEFVVPLA KYNKALYAQV SLGMRFRMMF
0301: ETEDCGVRRY MGTVTGISDL DPVRWKGSQW RNLQVGWDES TAGDRPSRVS IWEIEPVITP FYICPPPFFR PKYPRQPGMP DDELDMENAF KRAMPWMGED
0401: FGMKDAQSSM FPGLSLVQWM SMQQNNPLSG SATPQLPSAL SSFNLPNNFA SNDPSKLLNF QSPNLSSANS QFNKPNTVNH ISQQMQAQPA MVKSQQQQQQ
0501: QQQQHQHQQQ QLQQQQQLQM SQQQVQQQGI YNNGTIAVAN QVSCQSPNQP TGFSQSQLQQ QSMLPTGAKM THQNINSMGN KGLSQMTSFA QEMQFQQQLE
0601: MHNSSQLLRN QQEQSSLHSL QQNLSQNPQQ LQMQQQSSKP SPSQQLQLQL LQKLQQQQQQ QSIPPVSSSL QPQLSALQQT QSHQLQQLLS SQNQQPLAHG
0701: NNSFPASTFM QPPQIQVSPQ QQGQMSNKNL VAAGRSHSGH TDGEAPSCST SPSANNTGHD NVSPTNFLSR NQQQGQAASV SASDSVFERA SNPVQELYTK
0801: TESRISQGMM NMKSAGEHFR FKSAVTDQID VSTAGTTYCP DVVGPVQQQQ TFPLPSFGFD GDCQSHHPRN NLAFPGNLEA VTSDPLYSQK DFQNLVPNYG
0901: NTPRDIETEL SSAAISSQSF GIPSIPFKPG CSNEVGGIND SGIMNGGGLW PNQTQRMRTY TKVQKRGSVG RSIDVTRYSG YDELRHDLAR MFGIEGQLED
1001: PLTSDWKLVY TDHENDILLV GDDPWEEFVN CVQNIKILSS VEVQQMSLDG DLAAIPTTNQ ACSETDSGNA WKVHYEDTSA AASFNR
0101: VNKYDREALL ASDMGLKLNR QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIVAKD LHDTTWTFRH IYRGQPKRHL LTTGWSVFVS
0201: TKRLFAGDSV LFVRDEKSQL MLGIRRANRQ TPTLSSSVIS SDSMHIGILA AAAHANANSS PFTIFFNPRA SPSEFVVPLA KYNKALYAQV SLGMRFRMMF
0301: ETEDCGVRRY MGTVTGISDL DPVRWKGSQW RNLQVGWDES TAGDRPSRVS IWEIEPVITP FYICPPPFFR PKYPRQPGMP DDELDMENAF KRAMPWMGED
0401: FGMKDAQSSM FPGLSLVQWM SMQQNNPLSG SATPQLPSAL SSFNLPNNFA SNDPSKLLNF QSPNLSSANS QFNKPNTVNH ISQQMQAQPA MVKSQQQQQQ
0501: QQQQHQHQQQ QLQQQQQLQM SQQQVQQQGI YNNGTIAVAN QVSCQSPNQP TGFSQSQLQQ QSMLPTGAKM THQNINSMGN KGLSQMTSFA QEMQFQQQLE
0601: MHNSSQLLRN QQEQSSLHSL QQNLSQNPQQ LQMQQQSSKP SPSQQLQLQL LQKLQQQQQQ QSIPPVSSSL QPQLSALQQT QSHQLQQLLS SQNQQPLAHG
0701: NNSFPASTFM QPPQIQVSPQ QQGQMSNKNL VAAGRSHSGH TDGEAPSCST SPSANNTGHD NVSPTNFLSR NQQQGQAASV SASDSVFERA SNPVQELYTK
0801: TESRISQGMM NMKSAGEHFR FKSAVTDQID VSTAGTTYCP DVVGPVQQQQ TFPLPSFGFD GDCQSHHPRN NLAFPGNLEA VTSDPLYSQK DFQNLVPNYG
0901: NTPRDIETEL SSAAISSQSF GIPSIPFKPG CSNEVGGIND SGIMNGGGLW PNQTQRMRTY TKVQKRGSVG RSIDVTRYSG YDELRHDLAR MFGIEGQLED
1001: PLTSDWKLVY TDHENDILLV GDDPWEEFVN CVQNIKILSS VEVQQMSLDG DLAAIPTTNQ ACSETDSGNA WKVHYEDTSA AASFNR
Arabidopsis Description
ARF19Auxin response factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q8RYC8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.