Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d014690_P014 | Maize | nucleus | 93.01 | 90.28 |
| Os06t0702600-01 | Rice | nucleus | 73.94 | 86.48 |
| TraesCS7D01G409700.1 | Wheat | nucleus | 82.74 | 81.62 |
| TraesCS7B01G316600.1 | Wheat | nucleus | 82.4 | 81.35 |
| TraesCS7A01G416400.1 | Wheat | nucleus | 82.31 | 81.33 |
| HORVU7Hr1G096460.7 | Barley | mitochondrion, nucleus, vacuole | 80.24 | 77.37 |
| OQU84350 | Sorghum | nucleus | 69.28 | 75.05 |
| GSMUA_Achr3P05460_001 | Banana | nucleus | 60.48 | 72.05 |
| GSMUA_Achr9P14090_001 | Banana | nucleus | 56.08 | 71.43 |
| GSMUA_Achr5P05010_001 | Banana | nucleus | 50.13 | 66.7 |
| GSMUA_Achr8P23850_001 | Banana | nucleus | 59.19 | 64.29 |
| VIT_11s0065g00310.t01 | Wine grape | nucleus | 58.93 | 61.26 |
| Solyc07g016180.2.1 | Tomato | nucleus | 56.34 | 58.72 |
| PGSC0003DMT400025312 | Potato | nucleus | 56.0 | 58.26 |
| EES15359 | Sorghum | nucleus | 53.06 | 56.16 |
| Solyc05g047460.2.1 | Tomato | nucleus | 52.37 | 55.33 |
| KRH49070 | Soybean | nucleus | 52.98 | 55.32 |
| PGSC0003DMT400035592 | Potato | nucleus | 52.11 | 55.06 |
| KRH74145 | Soybean | nucleus | 52.37 | 54.98 |
| KRH60117 | Soybean | nucleus | 49.35 | 52.05 |
| KRH41404 | Soybean | nucleus | 49.35 | 51.39 |
| KXG19536 | Sorghum | nucleus | 42.8 | 47.1 |
| EER90218 | Sorghum | nucleus | 35.2 | 44.4 |
| KXG27404 | Sorghum | nucleus | 30.98 | 43.83 |
| EES04575 | Sorghum | nucleus | 34.43 | 43.8 |
| EES17392 | Sorghum | nucleus | 32.7 | 42.35 |
| EES06968 | Sorghum | nucleus | 21.31 | 36.76 |
| EES13038 | Sorghum | nucleus | 29.94 | 36.68 |
| EES10850 | Sorghum | nucleus | 20.28 | 35.55 |
| OQU83539 | Sorghum | nucleus | 22.95 | 32.64 |
| EES17013 | Sorghum | nucleus | 23.38 | 32.3 |
| KXG34038 | Sorghum | nucleus | 22.43 | 32.1 |
| EES02172 | Sorghum | nucleus | 18.9 | 31.83 |
Protein Annotations
| MapMan:15.5.5.1 | Gene3D:2.30.30.1040 | Gene3D:2.40.330.10 | Gene3D:3.10.20.90 | InterPro:AUX/IAA_dom | InterPro:Auxin_resp |
| InterPro:B3_DNA-bd | UniProt:C5Z987 | ncoils:Coil | InterPro:DNA-bd_pseudobarrel_sf | EnsemblPlants:EER90336 | ProteinID:EER90336 |
| ProteinID:EER90336.2 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009719 | GO:GO:0009725 | GO:GO:0009734 | GO:GO:0009987 | InterPro:IPR000270 | InterPro:IPR003340 |
| InterPro:IPR015300 | InterPro:PB1_dom | PFAM:PF02309 | PFAM:PF02362 | PFAM:PF06507 | PFscan:PS50863 |
| PFscan:PS51745 | PANTHER:PTHR31384 | PANTHER:PTHR31384:SF14 | SMART:SM01019 | EnsemblPlantsGene:SORBI_3010G253300 | SUPFAM:SSF101936 |
| SUPFAM:SSF54277 | UniParc:UPI0007F2A590 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr10:+:59219948..59227850
Molecular Weight (calculated)
128171.0 Da
IEP (calculated)
6.728
GRAVY (calculated)
-0.551
Length
1159 amino acids
Sequence
(BLAST)
(BLAST)
0001: MIKQHQQQQQ APPPQPMPAS SAAPPAPAVP AAATAPSGCE GEKKAPPINS ELWHACAGPL VSLPPAGSLV VYFPQGHSEQ VAASMQKDVD GHVPSYPNLP
0101: SKLICLLHNV TLHADPETDE VYAQMTLLPV TSYGKEALQL SELALKQPRP QTEFFCKTLT ASDTSTHGGF SVPRRAAEKI FPPLDFSMQP PAQEIQARDL
0201: HDNVWTFRHI YRGQPKRHLL TTGWSLFVSG KRLFAGDSVI FVRDERQQLL LGIRRANRQP TNISSSVLSS DSMHIGILAA AAHAAANNSP FTIFYNPRAS
0301: PTEFVVPFAK YQKALYGNQI SLGMRFRMMF ETEELGTRRY MGTITGISDL DPVRWKNSQW RNLQVGWDES AAGERRNRVS IWEIEPVAAP FFICPPPFFG
0401: SKRPRQLDDE SSEMENLLKR AMPWLGEEIC IKDPQTQNTV MPGLSLVQWM NMNMQQNSSF GNSAMQSEYL RSLSNPNMQN LGAADLSRQL NMQNQILQQN
0501: SIQFSSPKLP QQMQPVNELS KASLPLNQLG VGTKQQEQTQ DPSSLQRQQQ SMNQLLPLSQ SQTNLVQAQV LIQNQMQQQQ QPPSMTQNLQ PAASQSLLLP
0601: HQQQQQHQQQ KLVHQQQQLL LQQQQLQQQQ QNQQQLNKMA AQVPNLAPHQ LQLSDQQLQL QLLQKLQQQH QSLLSQPGVT LAQLPLIQEQ QKLIIDMQQQ
0701: LSNSQSLSQQ QIMTQQSTKV PSQATPPPPT GQQESQQKLP QKHVGFTDTS HTAIPPTTSV NAISAVGSPL MATGATHSVL TDEIPSCSTS PSTANGNHLL
0801: QPVLGRNQQC SVINYEKLPQ STAPMSIPSS LEAVTATPRS IKELPKLNSN VKQSVMASKL PNTGPVPQNL ANNAPPTDYL ETASSATSVW LSQADGLLHH
0901: GFPMSNFNQQ QMFKDVAPET DIHGADPSNN TLFGINGDGQ LGFPMGADGF LSNGIDASKY QNHISADIDG NYRIPKDGQQ EISSSMVSQS FGASDMAFNS
1001: IDSGMNDGGF VNRTSWPPAP PLKRMRTFTK VYKRGAVGRS IDISQFNGYD ELKHALARMF SMEGQLEERQ RIGWKLVYKD HEDDILLLGD DPWEEFVNCV
1101: KCIRILSPQE VQQMSLDGDL GNNILPNQAC SSSDGGNAWR ARCDQNSGNP STGSYDQFE
0101: SKLICLLHNV TLHADPETDE VYAQMTLLPV TSYGKEALQL SELALKQPRP QTEFFCKTLT ASDTSTHGGF SVPRRAAEKI FPPLDFSMQP PAQEIQARDL
0201: HDNVWTFRHI YRGQPKRHLL TTGWSLFVSG KRLFAGDSVI FVRDERQQLL LGIRRANRQP TNISSSVLSS DSMHIGILAA AAHAAANNSP FTIFYNPRAS
0301: PTEFVVPFAK YQKALYGNQI SLGMRFRMMF ETEELGTRRY MGTITGISDL DPVRWKNSQW RNLQVGWDES AAGERRNRVS IWEIEPVAAP FFICPPPFFG
0401: SKRPRQLDDE SSEMENLLKR AMPWLGEEIC IKDPQTQNTV MPGLSLVQWM NMNMQQNSSF GNSAMQSEYL RSLSNPNMQN LGAADLSRQL NMQNQILQQN
0501: SIQFSSPKLP QQMQPVNELS KASLPLNQLG VGTKQQEQTQ DPSSLQRQQQ SMNQLLPLSQ SQTNLVQAQV LIQNQMQQQQ QPPSMTQNLQ PAASQSLLLP
0601: HQQQQQHQQQ KLVHQQQQLL LQQQQLQQQQ QNQQQLNKMA AQVPNLAPHQ LQLSDQQLQL QLLQKLQQQH QSLLSQPGVT LAQLPLIQEQ QKLIIDMQQQ
0701: LSNSQSLSQQ QIMTQQSTKV PSQATPPPPT GQQESQQKLP QKHVGFTDTS HTAIPPTTSV NAISAVGSPL MATGATHSVL TDEIPSCSTS PSTANGNHLL
0801: QPVLGRNQQC SVINYEKLPQ STAPMSIPSS LEAVTATPRS IKELPKLNSN VKQSVMASKL PNTGPVPQNL ANNAPPTDYL ETASSATSVW LSQADGLLHH
0901: GFPMSNFNQQ QMFKDVAPET DIHGADPSNN TLFGINGDGQ LGFPMGADGF LSNGIDASKY QNHISADIDG NYRIPKDGQQ EISSSMVSQS FGASDMAFNS
1001: IDSGMNDGGF VNRTSWPPAP PLKRMRTFTK VYKRGAVGRS IDISQFNGYD ELKHALARMF SMEGQLEERQ RIGWKLVYKD HEDDILLLGD DPWEEFVNCV
1101: KCIRILSPQE VQQMSLDGDL GNNILPNQAC SSSDGGNAWR ARCDQNSGNP STGSYDQFE
0001: MKAPSNGFLP SSNEGEKKPI NSQLWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMQKQ TDFIPNYPNL PSKLICLLHS VTLHADTETD EVYAQMTLQP
0101: VNKYDREALL ASDMGLKLNR QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIVAKD LHDTTWTFRH IYRGQPKRHL LTTGWSVFVS
0201: TKRLFAGDSV LFVRDEKSQL MLGIRRANRQ TPTLSSSVIS SDSMHIGILA AAAHANANSS PFTIFFNPRA SPSEFVVPLA KYNKALYAQV SLGMRFRMMF
0301: ETEDCGVRRY MGTVTGISDL DPVRWKGSQW RNLQVGWDES TAGDRPSRVS IWEIEPVITP FYICPPPFFR PKYPRQPGMP DDELDMENAF KRAMPWMGED
0401: FGMKDAQSSM FPGLSLVQWM SMQQNNPLSG SATPQLPSAL SSFNLPNNFA SNDPSKLLNF QSPNLSSANS QFNKPNTVNH ISQQMQAQPA MVKSQQQQQQ
0501: QQQQHQHQQQ QLQQQQQLQM SQQQVQQQGI YNNGTIAVAN QVSCQSPNQP TGFSQSQLQQ QSMLPTGAKM THQNINSMGN KGLSQMTSFA QEMQFQQQLE
0601: MHNSSQLLRN QQEQSSLHSL QQNLSQNPQQ LQMQQQSSKP SPSQQLQLQL LQKLQQQQQQ QSIPPVSSSL QPQLSALQQT QSHQLQQLLS SQNQQPLAHG
0701: NNSFPASTFM QPPQIQVSPQ QQGQMSNKNL VAAGRSHSGH TDGEAPSCST SPSANNTGHD NVSPTNFLSR NQQQGQAASV SASDSVFERA SNPVQELYTK
0801: TESRISQGMM NMKSAGEHFR FKSAVTDQID VSTAGTTYCP DVVGPVQQQQ TFPLPSFGFD GDCQSHHPRN NLAFPGNLEA VTSDPLYSQK DFQNLVPNYG
0901: NTPRDIETEL SSAAISSQSF GIPSIPFKPG CSNEVGGIND SGIMNGGGLW PNQTQRMRTY TKVQKRGSVG RSIDVTRYSG YDELRHDLAR MFGIEGQLED
1001: PLTSDWKLVY TDHENDILLV GDDPWEEFVN CVQNIKILSS VEVQQMSLDG DLAAIPTTNQ ACSETDSGNA WKVHYEDTSA AASFNR
0101: VNKYDREALL ASDMGLKLNR QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIVAKD LHDTTWTFRH IYRGQPKRHL LTTGWSVFVS
0201: TKRLFAGDSV LFVRDEKSQL MLGIRRANRQ TPTLSSSVIS SDSMHIGILA AAAHANANSS PFTIFFNPRA SPSEFVVPLA KYNKALYAQV SLGMRFRMMF
0301: ETEDCGVRRY MGTVTGISDL DPVRWKGSQW RNLQVGWDES TAGDRPSRVS IWEIEPVITP FYICPPPFFR PKYPRQPGMP DDELDMENAF KRAMPWMGED
0401: FGMKDAQSSM FPGLSLVQWM SMQQNNPLSG SATPQLPSAL SSFNLPNNFA SNDPSKLLNF QSPNLSSANS QFNKPNTVNH ISQQMQAQPA MVKSQQQQQQ
0501: QQQQHQHQQQ QLQQQQQLQM SQQQVQQQGI YNNGTIAVAN QVSCQSPNQP TGFSQSQLQQ QSMLPTGAKM THQNINSMGN KGLSQMTSFA QEMQFQQQLE
0601: MHNSSQLLRN QQEQSSLHSL QQNLSQNPQQ LQMQQQSSKP SPSQQLQLQL LQKLQQQQQQ QSIPPVSSSL QPQLSALQQT QSHQLQQLLS SQNQQPLAHG
0701: NNSFPASTFM QPPQIQVSPQ QQGQMSNKNL VAAGRSHSGH TDGEAPSCST SPSANNTGHD NVSPTNFLSR NQQQGQAASV SASDSVFERA SNPVQELYTK
0801: TESRISQGMM NMKSAGEHFR FKSAVTDQID VSTAGTTYCP DVVGPVQQQQ TFPLPSFGFD GDCQSHHPRN NLAFPGNLEA VTSDPLYSQK DFQNLVPNYG
0901: NTPRDIETEL SSAAISSQSF GIPSIPFKPG CSNEVGGIND SGIMNGGGLW PNQTQRMRTY TKVQKRGSVG RSIDVTRYSG YDELRHDLAR MFGIEGQLED
1001: PLTSDWKLVY TDHENDILLV GDDPWEEFVN CVQNIKILSS VEVQQMSLDG DLAAIPTTNQ ACSETDSGNA WKVHYEDTSA AASFNR
Arabidopsis Description
ARF19Auxin response factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q8RYC8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.