Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G416400.1 | Wheat | nucleus | 98.72 | 98.89 |
| TraesCS7B01G316600.1 | Wheat | nucleus | 97.96 | 98.04 |
| HORVU7Hr1G096460.7 | Barley | mitochondrion, nucleus, vacuole | 92.26 | 90.18 |
| Os06t0702600-01 | Rice | nucleus | 72.94 | 86.48 |
| EER90336 | Sorghum | nucleus | 81.62 | 82.74 |
| Zm00001d014690_P014 | Maize | nucleus | 79.83 | 78.56 |
| TraesCS6D01G102300.1 | Wheat | nucleus | 70.98 | 73.87 |
| GSMUA_Achr3P05460_001 | Banana | nucleus | 59.4 | 71.74 |
| GSMUA_Achr9P14090_001 | Banana | nucleus | 54.04 | 69.78 |
| GSMUA_Achr5P05010_001 | Banana | nucleus | 48.85 | 65.9 |
| GSMUA_Achr8P23850_001 | Banana | nucleus | 57.28 | 63.07 |
| VIT_11s0065g00310.t01 | Wine grape | nucleus | 57.02 | 60.09 |
| Solyc07g016180.2.1 | Tomato | nucleus | 55.66 | 58.81 |
| PGSC0003DMT400025312 | Potato | nucleus | 55.23 | 58.26 |
| TraesCS7D01G250100.4 | Wheat | nucleus | 52.94 | 56.96 |
| KRH49070 | Soybean | nucleus | 52.43 | 55.5 |
| Solyc05g047460.2.1 | Tomato | nucleus | 51.4 | 55.06 |
| KRH74145 | Soybean | nucleus | 51.57 | 54.89 |
| PGSC0003DMT400035592 | Potato | nucleus | 51.23 | 54.88 |
| KRH60117 | Soybean | nucleus | 48.68 | 52.05 |
| KRH41404 | Soybean | nucleus | 48.77 | 51.48 |
| TraesCS7D01G161900.1 | Wheat | nucleus | 41.19 | 45.45 |
| TraesCS7D01G449900.2 | Wheat | nucleus | 34.72 | 44.93 |
| TraesCS2D01G548900.1 | Wheat | nucleus | 30.13 | 42.5 |
| TraesCS6D01G127600.2 | Wheat | nucleus | 33.36 | 42.29 |
| TraesCS5D01G045700.2 | Wheat | nucleus | 31.66 | 41.33 |
| TraesCS2D01G307600.1 | Wheat | nucleus | 20.26 | 36.39 |
| TraesCS2D01G491200.2 | Wheat | nucleus | 28.68 | 35.29 |
| TraesCS3D01G434700.1 | Wheat | nucleus | 22.13 | 32.66 |
| TraesCS3D01G166700.1 | Wheat | nucleus | 19.83 | 30.74 |
| TraesCS3D01G442000.7 | Wheat | nucleus | 21.96 | 29.12 |
Protein Annotations
| MapMan:15.5.5.1 | Gene3D:2.30.30.1040 | Gene3D:2.40.330.10 | Gene3D:3.10.20.90 | InterPro:AUX/IAA_dom | InterPro:Auxin_resp |
| InterPro:B3_DNA-bd | ncoils:Coil | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 |
| GO:GO:0009725 | GO:GO:0009987 | InterPro:IPR000270 | InterPro:IPR003340 | InterPro:IPR015300 | InterPro:PB1_dom |
| PFAM:PF02309 | PFAM:PF02362 | PFAM:PF06507 | PFscan:PS50863 | PFscan:PS51745 | PANTHER:PTHR31384 |
| PANTHER:PTHR31384:SF14 | SMART:SM01019 | SUPFAM:SSF101936 | SUPFAM:SSF54277 | EnsemblPlantsGene:TraesCS7D01G409700 | EnsemblPlants:TraesCS7D01G409700.1 |
| TIGR:cd10017 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr7D:-:528133169..528142840
Molecular Weight (calculated)
130940.0 Da
IEP (calculated)
6.614
GRAVY (calculated)
-0.612
Length
1175 amino acids
Sequence
(BLAST)
(BLAST)
0001: MMKMERQQQQ PPAPSAAAGS AVTVAVPGAG CEGEKKAPAI NSDLWHACAG PLVQLPPAGS LVVYFPQGHS EQVAASMQKD VDAHVPNYPN LPSKLICLLH
0101: NITLHADLET DEVYAQMTLQ PVTSYGKEAL QLSELALKQA RPQNEFFCKT LTASDTSTHG GFSVPRRAAE KIFPPLDFSM QPPAQEIQAR DLHDNVWTFR
0201: HIYRGQPKRH LLTTGWSLFV SGKRLFAGDS VIFVRDERQQ LLLGIRRANR QPTNISSSVL SSDSMHIGIL AAAAHAAANN SPFTIFYNPR ASPTEFVIPF
0301: AKYQKAVYGN QLSLGMRFRM MFETEELGTR RYMGTITGIN DLDPVRWKNS QWRNLQVGWD ESAAGERRNR VSIWEIEPVT APFFICPPPF FGAKRPRQLD
0401: DESSEMENLL KRAMPWLGEE ICIKDPQTQN TIMPGLSLVQ WMNMNMQQSS SFANTAMQSE YLRSITNPSM QNIGSGDLSR QLCLQNQLLQ QNNMQFNTPK
0501: LPQQMQPNNE LSKAALPLNQ NGASIKPEEQ TQDASNFQRQ QQSMNYALPL SQAQTSLAQA QVLIQSQMQQ QQQQPHISQN QLPAVSQPLL SHQQQQHHHH
0601: QQQQQHQQQE QQHQQQQQQQ KFLQQQQLLL QQQQLQQHQH QLQQQQQQQL GKMPAQLPNL SNQQLQLSDQ QLQLQLLQKL QQQQQSLLSQ PGVTLAQLPL
0701: IQEQQKLLMD MQQQLSSSHS LSQQQMMPQQ STKIPSQVAS LPPPMQPDTT HQKLPQKQAL PADTLEAAIP TTTSHKFSSA NGSPLRMPGA THSVVTEEIP
0801: SCSTSPSTAN GNHLLQPVPG RDQYSSMINT EKAPHSTAPM SVPSSLDAVT GAQRMTKELP KLNSNVKQNM MPSKLPNGGA GPQNFANNAP PTDYLETASS
0901: ATSVWLSQAD GLLHPNFPMT NFSQQQLFKD APPDTEIPAE IPSNNALFGI SNDGHVGFPM VTDDFLTNGI DAVKYENHIS TDIDNNYRIP KDAQQEISSS
1001: MVSQSFGASD MAFNSIDSGI NDGAFLNKSS WPPAPPVKRM RTFTKVYKRG AVGRSIDISQ YAGYEELKHA LARMFSIEGQ LEERQRIGWK LVYRDHEDDI
1101: LLLGDDPWEE FVNCVKCIRI LSPQEVQQMS LDGDLGSSVV PNQACSSSEG GGNAWRARCD QNSGNPSTGS YDQFE
0101: NITLHADLET DEVYAQMTLQ PVTSYGKEAL QLSELALKQA RPQNEFFCKT LTASDTSTHG GFSVPRRAAE KIFPPLDFSM QPPAQEIQAR DLHDNVWTFR
0201: HIYRGQPKRH LLTTGWSLFV SGKRLFAGDS VIFVRDERQQ LLLGIRRANR QPTNISSSVL SSDSMHIGIL AAAAHAAANN SPFTIFYNPR ASPTEFVIPF
0301: AKYQKAVYGN QLSLGMRFRM MFETEELGTR RYMGTITGIN DLDPVRWKNS QWRNLQVGWD ESAAGERRNR VSIWEIEPVT APFFICPPPF FGAKRPRQLD
0401: DESSEMENLL KRAMPWLGEE ICIKDPQTQN TIMPGLSLVQ WMNMNMQQSS SFANTAMQSE YLRSITNPSM QNIGSGDLSR QLCLQNQLLQ QNNMQFNTPK
0501: LPQQMQPNNE LSKAALPLNQ NGASIKPEEQ TQDASNFQRQ QQSMNYALPL SQAQTSLAQA QVLIQSQMQQ QQQQPHISQN QLPAVSQPLL SHQQQQHHHH
0601: QQQQQHQQQE QQHQQQQQQQ KFLQQQQLLL QQQQLQQHQH QLQQQQQQQL GKMPAQLPNL SNQQLQLSDQ QLQLQLLQKL QQQQQSLLSQ PGVTLAQLPL
0701: IQEQQKLLMD MQQQLSSSHS LSQQQMMPQQ STKIPSQVAS LPPPMQPDTT HQKLPQKQAL PADTLEAAIP TTTSHKFSSA NGSPLRMPGA THSVVTEEIP
0801: SCSTSPSTAN GNHLLQPVPG RDQYSSMINT EKAPHSTAPM SVPSSLDAVT GAQRMTKELP KLNSNVKQNM MPSKLPNGGA GPQNFANNAP PTDYLETASS
0901: ATSVWLSQAD GLLHPNFPMT NFSQQQLFKD APPDTEIPAE IPSNNALFGI SNDGHVGFPM VTDDFLTNGI DAVKYENHIS TDIDNNYRIP KDAQQEISSS
1001: MVSQSFGASD MAFNSIDSGI NDGAFLNKSS WPPAPPVKRM RTFTKVYKRG AVGRSIDISQ YAGYEELKHA LARMFSIEGQ LEERQRIGWK LVYRDHEDDI
1101: LLLGDDPWEE FVNCVKCIRI LSPQEVQQMS LDGDLGSSVV PNQACSSSEG GGNAWRARCD QNSGNPSTGS YDQFE
0001: MKAPSNGFLP SSNEGEKKPI NSQLWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMQKQ TDFIPNYPNL PSKLICLLHS VTLHADTETD EVYAQMTLQP
0101: VNKYDREALL ASDMGLKLNR QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIVAKD LHDTTWTFRH IYRGQPKRHL LTTGWSVFVS
0201: TKRLFAGDSV LFVRDEKSQL MLGIRRANRQ TPTLSSSVIS SDSMHIGILA AAAHANANSS PFTIFFNPRA SPSEFVVPLA KYNKALYAQV SLGMRFRMMF
0301: ETEDCGVRRY MGTVTGISDL DPVRWKGSQW RNLQVGWDES TAGDRPSRVS IWEIEPVITP FYICPPPFFR PKYPRQPGMP DDELDMENAF KRAMPWMGED
0401: FGMKDAQSSM FPGLSLVQWM SMQQNNPLSG SATPQLPSAL SSFNLPNNFA SNDPSKLLNF QSPNLSSANS QFNKPNTVNH ISQQMQAQPA MVKSQQQQQQ
0501: QQQQHQHQQQ QLQQQQQLQM SQQQVQQQGI YNNGTIAVAN QVSCQSPNQP TGFSQSQLQQ QSMLPTGAKM THQNINSMGN KGLSQMTSFA QEMQFQQQLE
0601: MHNSSQLLRN QQEQSSLHSL QQNLSQNPQQ LQMQQQSSKP SPSQQLQLQL LQKLQQQQQQ QSIPPVSSSL QPQLSALQQT QSHQLQQLLS SQNQQPLAHG
0701: NNSFPASTFM QPPQIQVSPQ QQGQMSNKNL VAAGRSHSGH TDGEAPSCST SPSANNTGHD NVSPTNFLSR NQQQGQAASV SASDSVFERA SNPVQELYTK
0801: TESRISQGMM NMKSAGEHFR FKSAVTDQID VSTAGTTYCP DVVGPVQQQQ TFPLPSFGFD GDCQSHHPRN NLAFPGNLEA VTSDPLYSQK DFQNLVPNYG
0901: NTPRDIETEL SSAAISSQSF GIPSIPFKPG CSNEVGGIND SGIMNGGGLW PNQTQRMRTY TKVQKRGSVG RSIDVTRYSG YDELRHDLAR MFGIEGQLED
1001: PLTSDWKLVY TDHENDILLV GDDPWEEFVN CVQNIKILSS VEVQQMSLDG DLAAIPTTNQ ACSETDSGNA WKVHYEDTSA AASFNR
0101: VNKYDREALL ASDMGLKLNR QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIVAKD LHDTTWTFRH IYRGQPKRHL LTTGWSVFVS
0201: TKRLFAGDSV LFVRDEKSQL MLGIRRANRQ TPTLSSSVIS SDSMHIGILA AAAHANANSS PFTIFFNPRA SPSEFVVPLA KYNKALYAQV SLGMRFRMMF
0301: ETEDCGVRRY MGTVTGISDL DPVRWKGSQW RNLQVGWDES TAGDRPSRVS IWEIEPVITP FYICPPPFFR PKYPRQPGMP DDELDMENAF KRAMPWMGED
0401: FGMKDAQSSM FPGLSLVQWM SMQQNNPLSG SATPQLPSAL SSFNLPNNFA SNDPSKLLNF QSPNLSSANS QFNKPNTVNH ISQQMQAQPA MVKSQQQQQQ
0501: QQQQHQHQQQ QLQQQQQLQM SQQQVQQQGI YNNGTIAVAN QVSCQSPNQP TGFSQSQLQQ QSMLPTGAKM THQNINSMGN KGLSQMTSFA QEMQFQQQLE
0601: MHNSSQLLRN QQEQSSLHSL QQNLSQNPQQ LQMQQQSSKP SPSQQLQLQL LQKLQQQQQQ QSIPPVSSSL QPQLSALQQT QSHQLQQLLS SQNQQPLAHG
0701: NNSFPASTFM QPPQIQVSPQ QQGQMSNKNL VAAGRSHSGH TDGEAPSCST SPSANNTGHD NVSPTNFLSR NQQQGQAASV SASDSVFERA SNPVQELYTK
0801: TESRISQGMM NMKSAGEHFR FKSAVTDQID VSTAGTTYCP DVVGPVQQQQ TFPLPSFGFD GDCQSHHPRN NLAFPGNLEA VTSDPLYSQK DFQNLVPNYG
0901: NTPRDIETEL SSAAISSQSF GIPSIPFKPG CSNEVGGIND SGIMNGGGLW PNQTQRMRTY TKVQKRGSVG RSIDVTRYSG YDELRHDLAR MFGIEGQLED
1001: PLTSDWKLVY TDHENDILLV GDDPWEEFVN CVQNIKILSS VEVQQMSLDG DLAAIPTTNQ ACSETDSGNA WKVHYEDTSA AASFNR
Arabidopsis Description
ARF19Auxin response factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q8RYC8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.