Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 1
- mitochondrion 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G409700.1 | Wheat | nucleus | 90.18 | 92.26 |
| TraesCS7A01G416400.1 | Wheat | nucleus | 89.77 | 91.99 |
| TraesCS7B01G316600.1 | Wheat | nucleus | 89.52 | 91.65 |
| Os06t0702600-01 | Rice | nucleus | 69.38 | 84.16 |
| EER90336 | Sorghum | nucleus | 77.37 | 80.24 |
| Zm00001d014690_P014 | Maize | nucleus | 76.04 | 76.55 |
| HORVU6Hr1G020330.30 | Barley | nucleus | 68.89 | 72.57 |
| GSMUA_Achr3P05460_001 | Banana | nucleus | 56.82 | 70.2 |
| GSMUA_Achr9P14090_001 | Banana | nucleus | 52.08 | 68.79 |
| GSMUA_Achr5P05010_001 | Banana | nucleus | 46.42 | 64.06 |
| GSMUA_Achr8P23850_001 | Banana | nucleus | 54.74 | 61.67 |
| VIT_11s0065g00310.t01 | Wine grape | nucleus | 55.07 | 59.37 |
| Solyc07g016180.2.1 | Tomato | nucleus | 53.83 | 58.18 |
| PGSC0003DMT400025312 | Potato | nucleus | 53.49 | 57.72 |
| HORVU7Hr1G051930.4 | Barley | nucleus | 50.58 | 56.14 |
| KRH49070 | Soybean | nucleus | 50.58 | 54.77 |
| Solyc05g047460.2.1 | Tomato | nucleus | 49.83 | 54.6 |
| PGSC0003DMT400035592 | Potato | nucleus | 49.75 | 54.51 |
| KRH74145 | Soybean | nucleus | 49.92 | 54.35 |
| KRH60117 | Soybean | nucleus | 46.84 | 51.23 |
| KRH41404 | Soybean | nucleus | 47.25 | 51.03 |
| HORVU7Hr1G033820.5 | Barley | nucleus | 39.35 | 44.37 |
| HORVU7Hr1G106280.1 | Barley | nucleus | 33.36 | 42.75 |
| HORVU6Hr1G026730.9 | Barley | nucleus | 32.2 | 41.66 |
| HORVU2Hr1G121110.32 | Barley | nucleus | 28.87 | 41.41 |
| HORVU5Hr1G009650.20 | Barley | nucleus | 30.2 | 40.74 |
| HORVU2Hr1G076920.3 | Barley | nucleus | 19.72 | 35.48 |
| HORVU2Hr1G109650.18 | Barley | nucleus | 27.79 | 34.9 |
| HORVU3Hr1G097200.10 | Barley | nucleus | 21.55 | 30.65 |
| HORVU3Hr1G096410.4 | Barley | nucleus, plastid | 19.97 | 29.85 |
| HORVU3Hr1G096510.3 | Barley | plastid | 19.97 | 28.78 |
| HORVU3Hr1G032230.6 | Barley | nucleus, plastid | 19.13 | 28.75 |
Protein Annotations
| MapMan:15.5.5.1 | Gene3D:2.30.30.1040 | Gene3D:2.40.330.10 | Gene3D:3.10.20.90 | UniProt:A0A287XGK0 | InterPro:AUX/IAA_dom |
| InterPro:Auxin_resp | InterPro:B3_DNA-bd | ncoils:Coil | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009725 | GO:GO:0009734 |
| GO:GO:0009987 | EnsemblPlantsGene:HORVU7Hr1G096460 | EnsemblPlants:HORVU7Hr1G096460.7 | InterPro:IPR000270 | InterPro:IPR003340 | InterPro:IPR015300 |
| InterPro:PB1_dom | PFAM:PF02309 | PFAM:PF02362 | PFAM:PF06507 | PFscan:PS50863 | PFscan:PS51745 |
| PANTHER:PTHR31384 | PANTHER:PTHR31384:SF14 | SMART:SM01019 | SUPFAM:SSF101936 | SUPFAM:SSF54277 | SignalP:SignalP-noTM |
| UniParc:UPI000B46E364 | SEG:seg | : | : | : | : |
Description
Auxin response factor [Source:UniProtKB/TrEMBL;Acc:A0A287XGK0]
Coordinates
chrchr7H:+:588070405..588078643
Molecular Weight (calculated)
134491.0 Da
IEP (calculated)
6.815
GRAVY (calculated)
-0.605
Length
1202 amino acids
Sequence
(BLAST)
(BLAST)
0001: VFVLHLFWPY YCIWASQGLE ESRRGAMCGV VPVTASLSRA LLAANTSDNR PNKRHSEGEK KAPAINSDLW HACAGPLVQL PPAGSLVVYF PQGHSEQVAA
0101: SMQKDVDAHV PNYPNLPSKL ICLLHNITLH ADLETDEVYA RMTLQPVTSY GKEALQLSEL ALKQARPQNE FFCKTLTASD TSTHGGFSVP RRSAEKIFPP
0201: LDFSMQPPAQ EIQARDLHDN VWTFRHIYRG QPKRHLLTTG WSLFVSGKRL FAGDSVIFVR DERQQLLLGI RRANRQPTNI SSSVLSSDSM HIGILAAAAH
0301: AAANNSPFTI FYNPRASPTE FVIPFAKYQK AVYGNQLSLG MRFRMMFETE ELGTRRYMGT ITGINDLDPV RWKNSQWRNL QVGWDESAAG ERRNRVSIWE
0401: IEPVAAPFFI CPPPFFGAKR PRQLDDESSE MENLWKRAMP WLGEEICIKD PQTQNTIMPG LSLVQWMNMN MQQSSSFANT AMQSEYLRSI TNSSMQNIGS
0501: SELSRQLCLQ NQLLQQNNMQ FNSPKLPQQM QPNNDLSKAA VPLNQNGMSI KQQEQTQDAS NFQRQQQSMN YALPLSQAQT NLAQAQVVVQ NQMQQQQPQP
0601: HTSQNQLPSV SQPLMSHQQQ QQQQHQQQQQ QQLQQQQKQQ EHQHQQQQQQ LQQQKFLQQQ QLLIQQEQLQ QHQQHQLSKM PAQLPNLSNQ QLQLSDQQLQ
0701: LQLLQKLQQQ QQALLSQPGI TLAQLPLIQE QQKLLMDMQQ QLSSSHSLSQ QQMMPQQSTK IPSQAASLPP PMQPDTTQQK LPQKQALPAD TLEAAIPLTT
0801: SRKFGSANGS PLRMPGATHS VVTEEIPSCS TSPSTANGSH LLQPVTGRDQ YSSMINTEKA PHSSAPMSVP NSLDAVTGAQ RMTKELPKLN SNVKQNTMSS
0901: KLPNGGAGLQ TFANNAAPTD YLETASSATS VWLSQTDGLL HPNFPMSNFT QQQLFKDAPP DTEIPAEVPS NNALFGISND GHVGFPMVTD DFLTNGIDAV
1001: KYENHISTDI DNSYRIPKDA QQEISSSMVS QSFGASDMAF NSIDSGINDG TFLNRSSWPP APPVKRMRTF TKVYKRGAVG RSIDISQYAG YEELKQALAR
1101: MFSIEGQLEE RQRIGWKLVY RDHEDDILLL GDDPWEEFVN CVKCIRILSP QEVQQMSLDG DLGSSIVPNQ ACSSSEGGGN AWKARCDQNS GNPSTGSYDQ
1201: FE
0101: SMQKDVDAHV PNYPNLPSKL ICLLHNITLH ADLETDEVYA RMTLQPVTSY GKEALQLSEL ALKQARPQNE FFCKTLTASD TSTHGGFSVP RRSAEKIFPP
0201: LDFSMQPPAQ EIQARDLHDN VWTFRHIYRG QPKRHLLTTG WSLFVSGKRL FAGDSVIFVR DERQQLLLGI RRANRQPTNI SSSVLSSDSM HIGILAAAAH
0301: AAANNSPFTI FYNPRASPTE FVIPFAKYQK AVYGNQLSLG MRFRMMFETE ELGTRRYMGT ITGINDLDPV RWKNSQWRNL QVGWDESAAG ERRNRVSIWE
0401: IEPVAAPFFI CPPPFFGAKR PRQLDDESSE MENLWKRAMP WLGEEICIKD PQTQNTIMPG LSLVQWMNMN MQQSSSFANT AMQSEYLRSI TNSSMQNIGS
0501: SELSRQLCLQ NQLLQQNNMQ FNSPKLPQQM QPNNDLSKAA VPLNQNGMSI KQQEQTQDAS NFQRQQQSMN YALPLSQAQT NLAQAQVVVQ NQMQQQQPQP
0601: HTSQNQLPSV SQPLMSHQQQ QQQQHQQQQQ QQLQQQQKQQ EHQHQQQQQQ LQQQKFLQQQ QLLIQQEQLQ QHQQHQLSKM PAQLPNLSNQ QLQLSDQQLQ
0701: LQLLQKLQQQ QQALLSQPGI TLAQLPLIQE QQKLLMDMQQ QLSSSHSLSQ QQMMPQQSTK IPSQAASLPP PMQPDTTQQK LPQKQALPAD TLEAAIPLTT
0801: SRKFGSANGS PLRMPGATHS VVTEEIPSCS TSPSTANGSH LLQPVTGRDQ YSSMINTEKA PHSSAPMSVP NSLDAVTGAQ RMTKELPKLN SNVKQNTMSS
0901: KLPNGGAGLQ TFANNAAPTD YLETASSATS VWLSQTDGLL HPNFPMSNFT QQQLFKDAPP DTEIPAEVPS NNALFGISND GHVGFPMVTD DFLTNGIDAV
1001: KYENHISTDI DNSYRIPKDA QQEISSSMVS QSFGASDMAF NSIDSGINDG TFLNRSSWPP APPVKRMRTF TKVYKRGAVG RSIDISQYAG YEELKQALAR
1101: MFSIEGQLEE RQRIGWKLVY RDHEDDILLL GDDPWEEFVN CVKCIRILSP QEVQQMSLDG DLGSSIVPNQ ACSSSEGGGN AWKARCDQNS GNPSTGSYDQ
1201: FE
0001: MKAPSNGFLP SSNEGEKKPI NSQLWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMQKQ TDFIPNYPNL PSKLICLLHS VTLHADTETD EVYAQMTLQP
0101: VNKYDREALL ASDMGLKLNR QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIVAKD LHDTTWTFRH IYRGQPKRHL LTTGWSVFVS
0201: TKRLFAGDSV LFVRDEKSQL MLGIRRANRQ TPTLSSSVIS SDSMHIGILA AAAHANANSS PFTIFFNPRA SPSEFVVPLA KYNKALYAQV SLGMRFRMMF
0301: ETEDCGVRRY MGTVTGISDL DPVRWKGSQW RNLQVGWDES TAGDRPSRVS IWEIEPVITP FYICPPPFFR PKYPRQPGMP DDELDMENAF KRAMPWMGED
0401: FGMKDAQSSM FPGLSLVQWM SMQQNNPLSG SATPQLPSAL SSFNLPNNFA SNDPSKLLNF QSPNLSSANS QFNKPNTVNH ISQQMQAQPA MVKSQQQQQQ
0501: QQQQHQHQQQ QLQQQQQLQM SQQQVQQQGI YNNGTIAVAN QVSCQSPNQP TGFSQSQLQQ QSMLPTGAKM THQNINSMGN KGLSQMTSFA QEMQFQQQLE
0601: MHNSSQLLRN QQEQSSLHSL QQNLSQNPQQ LQMQQQSSKP SPSQQLQLQL LQKLQQQQQQ QSIPPVSSSL QPQLSALQQT QSHQLQQLLS SQNQQPLAHG
0701: NNSFPASTFM QPPQIQVSPQ QQGQMSNKNL VAAGRSHSGH TDGEAPSCST SPSANNTGHD NVSPTNFLSR NQQQGQAASV SASDSVFERA SNPVQELYTK
0801: TESRISQGMM NMKSAGEHFR FKSAVTDQID VSTAGTTYCP DVVGPVQQQQ TFPLPSFGFD GDCQSHHPRN NLAFPGNLEA VTSDPLYSQK DFQNLVPNYG
0901: NTPRDIETEL SSAAISSQSF GIPSIPFKPG CSNEVGGIND SGIMNGGGLW PNQTQRMRTY TKVQKRGSVG RSIDVTRYSG YDELRHDLAR MFGIEGQLED
1001: PLTSDWKLVY TDHENDILLV GDDPWEEFVN CVQNIKILSS VEVQQMSLDG DLAAIPTTNQ ACSETDSGNA WKVHYEDTSA AASFNR
0101: VNKYDREALL ASDMGLKLNR QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIVAKD LHDTTWTFRH IYRGQPKRHL LTTGWSVFVS
0201: TKRLFAGDSV LFVRDEKSQL MLGIRRANRQ TPTLSSSVIS SDSMHIGILA AAAHANANSS PFTIFFNPRA SPSEFVVPLA KYNKALYAQV SLGMRFRMMF
0301: ETEDCGVRRY MGTVTGISDL DPVRWKGSQW RNLQVGWDES TAGDRPSRVS IWEIEPVITP FYICPPPFFR PKYPRQPGMP DDELDMENAF KRAMPWMGED
0401: FGMKDAQSSM FPGLSLVQWM SMQQNNPLSG SATPQLPSAL SSFNLPNNFA SNDPSKLLNF QSPNLSSANS QFNKPNTVNH ISQQMQAQPA MVKSQQQQQQ
0501: QQQQHQHQQQ QLQQQQQLQM SQQQVQQQGI YNNGTIAVAN QVSCQSPNQP TGFSQSQLQQ QSMLPTGAKM THQNINSMGN KGLSQMTSFA QEMQFQQQLE
0601: MHNSSQLLRN QQEQSSLHSL QQNLSQNPQQ LQMQQQSSKP SPSQQLQLQL LQKLQQQQQQ QSIPPVSSSL QPQLSALQQT QSHQLQQLLS SQNQQPLAHG
0701: NNSFPASTFM QPPQIQVSPQ QQGQMSNKNL VAAGRSHSGH TDGEAPSCST SPSANNTGHD NVSPTNFLSR NQQQGQAASV SASDSVFERA SNPVQELYTK
0801: TESRISQGMM NMKSAGEHFR FKSAVTDQID VSTAGTTYCP DVVGPVQQQQ TFPLPSFGFD GDCQSHHPRN NLAFPGNLEA VTSDPLYSQK DFQNLVPNYG
0901: NTPRDIETEL SSAAISSQSF GIPSIPFKPG CSNEVGGIND SGIMNGGGLW PNQTQRMRTY TKVQKRGSVG RSIDVTRYSG YDELRHDLAR MFGIEGQLED
1001: PLTSDWKLVY TDHENDILLV GDDPWEEFVN CVQNIKILSS VEVQQMSLDG DLAAIPTTNQ ACSETDSGNA WKVHYEDTSA AASFNR
Arabidopsis Description
ARF19Auxin response factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q8RYC8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.