Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G409700.1 | Wheat | nucleus | 98.89 | 98.72 |
| TraesCS7B01G316600.1 | Wheat | nucleus | 98.04 | 97.96 |
| HORVU7Hr1G096460.7 | Barley | mitochondrion, nucleus, vacuole | 91.99 | 89.77 |
| Os06t0702600-01 | Rice | nucleus | 72.8 | 86.18 |
| EER90336 | Sorghum | nucleus | 81.33 | 82.31 |
| Zm00001d014690_P014 | Maize | nucleus | 79.62 | 78.22 |
| TraesCS6A01G113000.1 | Wheat | nucleus | 70.93 | 73.3 |
| GSMUA_Achr3P05460_001 | Banana | nucleus | 59.51 | 71.74 |
| GSMUA_Achr9P14090_001 | Banana | nucleus | 54.31 | 70.0 |
| GSMUA_Achr5P05010_001 | Banana | nucleus | 48.93 | 65.9 |
| GSMUA_Achr8P23850_001 | Banana | nucleus | 57.2 | 62.89 |
| VIT_11s0065g00310.t01 | Wine grape | nucleus | 56.95 | 59.91 |
| Solyc07g016180.2.1 | Tomato | nucleus | 55.58 | 58.63 |
| PGSC0003DMT400025312 | Potato | nucleus | 55.24 | 58.17 |
| TraesCS7A01G252000.2 | Wheat | nucleus | 52.6 | 56.76 |
| KRH49070 | Soybean | nucleus | 52.6 | 55.59 |
| KRH74145 | Soybean | nucleus | 51.75 | 54.98 |
| Solyc05g047460.2.1 | Tomato | nucleus | 51.32 | 54.88 |
| PGSC0003DMT400035592 | Potato | nucleus | 51.15 | 54.69 |
| KRH60117 | Soybean | nucleus | 48.68 | 51.96 |
| KRH41404 | Soybean | nucleus | 48.85 | 51.48 |
| TraesCS7A01G160800.1 | Wheat | nucleus | 41.69 | 45.87 |
| TraesCS7A01G461700.1 | Wheat | nucleus | 34.61 | 44.66 |
| TraesCS2A01G547800.1 | Wheat | nucleus | 30.18 | 42.6 |
| TraesCS6A01G138600.4 | Wheat | nucleus | 33.16 | 41.92 |
| TraesCS5A01G038300.2 | Wheat | nucleus | 31.71 | 41.38 |
| TraesCS2A01G309300.1 | Wheat | nucleus | 20.46 | 36.7 |
| TraesCS2A01G491000.1 | Wheat | nucleus | 28.56 | 35.08 |
| TraesCS3A01G442000.1 | Wheat | nucleus | 22.25 | 32.75 |
| TraesCS3A01G449300.3 | Wheat | nucleus | 21.82 | 30.88 |
| TraesCS3A01G159200.1 | Wheat | nucleus | 19.78 | 30.57 |
Protein Annotations
| MapMan:15.5.5.1 | Gene3D:2.30.30.1040 | Gene3D:2.40.330.10 | Gene3D:3.10.20.90 | InterPro:AUX/IAA_dom | InterPro:Auxin_resp |
| InterPro:B3_DNA-bd | ncoils:Coil | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 |
| GO:GO:0009725 | GO:GO:0009987 | InterPro:IPR000270 | InterPro:IPR003340 | InterPro:IPR015300 | InterPro:PB1_dom |
| PFAM:PF02309 | PFAM:PF02362 | PFAM:PF06507 | PFscan:PS50863 | PFscan:PS51745 | PANTHER:PTHR31384 |
| PANTHER:PTHR31384:SF14 | SMART:SM01019 | SUPFAM:SSF101936 | SUPFAM:SSF54277 | EnsemblPlantsGene:TraesCS7A01G416400 | EnsemblPlants:TraesCS7A01G416400.1 |
| TIGR:cd10017 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr7A:-:608398712..608406733
Molecular Weight (calculated)
130611.0 Da
IEP (calculated)
6.562
GRAVY (calculated)
-0.599
Length
1173 amino acids
Sequence
(BLAST)
(BLAST)
0001: MMKMERQQQP AAASSAAGSA VTVAVPGAGC EGEKKAPAIN SDLWHACAGP LVQLPPAGSL VVYFPQGHSE QVAASMQKDV DAHVPNYPNL PSKLICLLHN
0101: ITLHADLETD EVYAQMTLQP VTSYGKEALQ LSELALKQAR PQNEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIQARD LHDNVWTFRH
0201: IYRGQPKRHL LTTGWSLFVS GKRLFAGDSV IFVRDERQQL LLGIRRANRQ PTNISSSVLS SDSMHIGILA AAAHAAANNS PFTIFYNPRA SPTEFVIPFA
0301: KYQKAVYGNQ LSLGMRFRMM FETEELGTRR YMGTITGIND LDPVRWKNSQ WRNLQVGWDE SAAGERRNRV SIWEIEPVAA PFFICPPPFF GAKRPRQLDD
0401: ESSEMENLLK RAMPWLGEEI CIKDPQTQNT IMPGLSLVQW MNMNMQQSSS FANTAMQSEY LRSITNPSMQ NIGSGDLSRQ LCLQNQLLQQ NNMQFNTPKL
0501: PQQMQPNNEL SKAALPLNQN GASIKPEEQT QDTSNFQRQQ QSMNYTLPLS QAQTSLAQAQ VLIQSQMQQQ QQQQQPHISQ NQLPAVSQPL LSHQQQQHHH
0601: QQHQHQQQEQ QHQQQQQQKF LQQQQLLLQQ QQLQQHQHQL QQQQQQQLGK MPAQLPNLSN QQLQLSDQQL QLQLLQKLQQ QQQSLLSQPG VTLAQLPLIQ
0701: EQQKLLMDMQ QQLSSSHSLS QQQMMPQQST KIPSQAASLP PPMQPDTTHQ KLPQKQALPA DTLEAAIPTT TSHKFSSANG SPLRMPGATH SVVTEEIPSC
0801: STSPSTANGN HLLQPVPGRD QYSSMINTEK APHSTAPMSV PSSLDAVTGA QRMTKELPKL NSNVKQNMMP SKLLNGGAGP QNFANNAAPT DYLETASSAT
0901: SVWLSQADGL LHPNFPMTNF SQQQLFKDAP PDTEIPAEIP SNNALFGISN DGHVGFPMVT DDFLTNGIDA VKYENHISTD IDNNYRIPKD AQQEISSSMV
1001: SQSFGASDMA FNSIDSGIND GAFLNKSSWP PAPPVKRMRT FTKVYKRGAV GRSIDISQYA GYEELKHALA QMFSIEGQLE ERQRIGWKLV YRDHEDDILL
1101: LGDDPWEEFV NCVKCIRILS PQEVQQMSLD GDLGSSVVPN QACSSSEGGG NAWRARCDQN SGNPSTGSYD QFE
0101: ITLHADLETD EVYAQMTLQP VTSYGKEALQ LSELALKQAR PQNEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIQARD LHDNVWTFRH
0201: IYRGQPKRHL LTTGWSLFVS GKRLFAGDSV IFVRDERQQL LLGIRRANRQ PTNISSSVLS SDSMHIGILA AAAHAAANNS PFTIFYNPRA SPTEFVIPFA
0301: KYQKAVYGNQ LSLGMRFRMM FETEELGTRR YMGTITGIND LDPVRWKNSQ WRNLQVGWDE SAAGERRNRV SIWEIEPVAA PFFICPPPFF GAKRPRQLDD
0401: ESSEMENLLK RAMPWLGEEI CIKDPQTQNT IMPGLSLVQW MNMNMQQSSS FANTAMQSEY LRSITNPSMQ NIGSGDLSRQ LCLQNQLLQQ NNMQFNTPKL
0501: PQQMQPNNEL SKAALPLNQN GASIKPEEQT QDTSNFQRQQ QSMNYTLPLS QAQTSLAQAQ VLIQSQMQQQ QQQQQPHISQ NQLPAVSQPL LSHQQQQHHH
0601: QQHQHQQQEQ QHQQQQQQKF LQQQQLLLQQ QQLQQHQHQL QQQQQQQLGK MPAQLPNLSN QQLQLSDQQL QLQLLQKLQQ QQQSLLSQPG VTLAQLPLIQ
0701: EQQKLLMDMQ QQLSSSHSLS QQQMMPQQST KIPSQAASLP PPMQPDTTHQ KLPQKQALPA DTLEAAIPTT TSHKFSSANG SPLRMPGATH SVVTEEIPSC
0801: STSPSTANGN HLLQPVPGRD QYSSMINTEK APHSTAPMSV PSSLDAVTGA QRMTKELPKL NSNVKQNMMP SKLLNGGAGP QNFANNAAPT DYLETASSAT
0901: SVWLSQADGL LHPNFPMTNF SQQQLFKDAP PDTEIPAEIP SNNALFGISN DGHVGFPMVT DDFLTNGIDA VKYENHISTD IDNNYRIPKD AQQEISSSMV
1001: SQSFGASDMA FNSIDSGIND GAFLNKSSWP PAPPVKRMRT FTKVYKRGAV GRSIDISQYA GYEELKHALA QMFSIEGQLE ERQRIGWKLV YRDHEDDILL
1101: LGDDPWEEFV NCVKCIRILS PQEVQQMSLD GDLGSSVVPN QACSSSEGGG NAWRARCDQN SGNPSTGSYD QFE
0001: MKAPSNGFLP SSNEGEKKPI NSQLWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMQKQ TDFIPNYPNL PSKLICLLHS VTLHADTETD EVYAQMTLQP
0101: VNKYDREALL ASDMGLKLNR QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIVAKD LHDTTWTFRH IYRGQPKRHL LTTGWSVFVS
0201: TKRLFAGDSV LFVRDEKSQL MLGIRRANRQ TPTLSSSVIS SDSMHIGILA AAAHANANSS PFTIFFNPRA SPSEFVVPLA KYNKALYAQV SLGMRFRMMF
0301: ETEDCGVRRY MGTVTGISDL DPVRWKGSQW RNLQVGWDES TAGDRPSRVS IWEIEPVITP FYICPPPFFR PKYPRQPGMP DDELDMENAF KRAMPWMGED
0401: FGMKDAQSSM FPGLSLVQWM SMQQNNPLSG SATPQLPSAL SSFNLPNNFA SNDPSKLLNF QSPNLSSANS QFNKPNTVNH ISQQMQAQPA MVKSQQQQQQ
0501: QQQQHQHQQQ QLQQQQQLQM SQQQVQQQGI YNNGTIAVAN QVSCQSPNQP TGFSQSQLQQ QSMLPTGAKM THQNINSMGN KGLSQMTSFA QEMQFQQQLE
0601: MHNSSQLLRN QQEQSSLHSL QQNLSQNPQQ LQMQQQSSKP SPSQQLQLQL LQKLQQQQQQ QSIPPVSSSL QPQLSALQQT QSHQLQQLLS SQNQQPLAHG
0701: NNSFPASTFM QPPQIQVSPQ QQGQMSNKNL VAAGRSHSGH TDGEAPSCST SPSANNTGHD NVSPTNFLSR NQQQGQAASV SASDSVFERA SNPVQELYTK
0801: TESRISQGMM NMKSAGEHFR FKSAVTDQID VSTAGTTYCP DVVGPVQQQQ TFPLPSFGFD GDCQSHHPRN NLAFPGNLEA VTSDPLYSQK DFQNLVPNYG
0901: NTPRDIETEL SSAAISSQSF GIPSIPFKPG CSNEVGGIND SGIMNGGGLW PNQTQRMRTY TKVQKRGSVG RSIDVTRYSG YDELRHDLAR MFGIEGQLED
1001: PLTSDWKLVY TDHENDILLV GDDPWEEFVN CVQNIKILSS VEVQQMSLDG DLAAIPTTNQ ACSETDSGNA WKVHYEDTSA AASFNR
0101: VNKYDREALL ASDMGLKLNR QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIVAKD LHDTTWTFRH IYRGQPKRHL LTTGWSVFVS
0201: TKRLFAGDSV LFVRDEKSQL MLGIRRANRQ TPTLSSSVIS SDSMHIGILA AAAHANANSS PFTIFFNPRA SPSEFVVPLA KYNKALYAQV SLGMRFRMMF
0301: ETEDCGVRRY MGTVTGISDL DPVRWKGSQW RNLQVGWDES TAGDRPSRVS IWEIEPVITP FYICPPPFFR PKYPRQPGMP DDELDMENAF KRAMPWMGED
0401: FGMKDAQSSM FPGLSLVQWM SMQQNNPLSG SATPQLPSAL SSFNLPNNFA SNDPSKLLNF QSPNLSSANS QFNKPNTVNH ISQQMQAQPA MVKSQQQQQQ
0501: QQQQHQHQQQ QLQQQQQLQM SQQQVQQQGI YNNGTIAVAN QVSCQSPNQP TGFSQSQLQQ QSMLPTGAKM THQNINSMGN KGLSQMTSFA QEMQFQQQLE
0601: MHNSSQLLRN QQEQSSLHSL QQNLSQNPQQ LQMQQQSSKP SPSQQLQLQL LQKLQQQQQQ QSIPPVSSSL QPQLSALQQT QSHQLQQLLS SQNQQPLAHG
0701: NNSFPASTFM QPPQIQVSPQ QQGQMSNKNL VAAGRSHSGH TDGEAPSCST SPSANNTGHD NVSPTNFLSR NQQQGQAASV SASDSVFERA SNPVQELYTK
0801: TESRISQGMM NMKSAGEHFR FKSAVTDQID VSTAGTTYCP DVVGPVQQQQ TFPLPSFGFD GDCQSHHPRN NLAFPGNLEA VTSDPLYSQK DFQNLVPNYG
0901: NTPRDIETEL SSAAISSQSF GIPSIPFKPG CSNEVGGIND SGIMNGGGLW PNQTQRMRTY TKVQKRGSVG RSIDVTRYSG YDELRHDLAR MFGIEGQLED
1001: PLTSDWKLVY TDHENDILLV GDDPWEEFVN CVQNIKILSS VEVQQMSLDG DLAAIPTTNQ ACSETDSGNA WKVHYEDTSA AASFNR
Arabidopsis Description
ARF19Auxin response factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q8RYC8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.