Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d015243_P001 | Maize | nucleus | 88.22 | 86.45 |
| TraesCS6D01G102300.1 | Wheat | nucleus | 79.91 | 75.73 |
| Os02t0141100-00 | Rice | nucleus | 78.97 | 75.72 |
| TraesCS6B01G141300.2 | Wheat | nucleus | 80.0 | 75.69 |
| TraesCS6A01G113000.1 | Wheat | nucleus | 80.0 | 75.42 |
| HORVU6Hr1G020330.30 | Barley | nucleus | 79.91 | 74.93 |
| EER90336 | Sorghum | nucleus | 75.05 | 69.28 |
| GSMUA_Achr3P05460_001 | Banana | nucleus | 58.88 | 64.75 |
| GSMUA_Achr9P14090_001 | Banana | nucleus | 53.74 | 63.19 |
| GSMUA_Achr5P05010_001 | Banana | nucleus | 51.12 | 62.8 |
| GSMUA_Achr8P23850_001 | Banana | nucleus | 56.64 | 56.79 |
| VIT_11s0065g00310.t01 | Wine grape | nucleus | 57.2 | 54.89 |
| Solyc07g016180.2.1 | Tomato | nucleus | 54.11 | 52.07 |
| EES15359 | Sorghum | nucleus | 53.08 | 51.87 |
| PGSC0003DMT400025312 | Potato | nucleus | 53.93 | 51.8 |
| KRH49070 | Soybean | nucleus | 52.8 | 50.9 |
| KRH74145 | Soybean | nucleus | 52.34 | 50.72 |
| PGSC0003DMT400035592 | Potato | nucleus | 50.93 | 49.68 |
| Solyc05g047460.2.1 | Tomato | nucleus | 50.84 | 49.59 |
| KRH60117 | Soybean | nucleus | 49.07 | 47.77 |
| KRH41404 | Soybean | nucleus | 49.35 | 47.44 |
| KXG19536 | Sorghum | nucleus | 41.12 | 41.79 |
| KXG27404 | Sorghum | nucleus | 31.03 | 40.54 |
| EER90218 | Sorghum | nucleus | 34.11 | 39.72 |
| EES04575 | Sorghum | nucleus | 33.46 | 39.3 |
| EES17392 | Sorghum | nucleus | 32.34 | 38.66 |
| EES06968 | Sorghum | nucleus | 21.21 | 33.78 |
| EES10850 | Sorghum | nucleus | 20.47 | 33.13 |
| EES13038 | Sorghum | nucleus | 29.16 | 32.98 |
| EES17013 | Sorghum | nucleus | 22.99 | 29.32 |
| KXG34038 | Sorghum | nucleus | 22.06 | 29.14 |
| OQU83539 | Sorghum | nucleus | 22.15 | 29.08 |
| EES02172 | Sorghum | nucleus | 18.32 | 28.49 |
Protein Annotations
| MapMan:15.5.5.1 | Gene3D:2.30.30.1040 | Gene3D:2.40.330.10 | Gene3D:3.10.20.90 | UniProt:A0A1Z5RKS4 | InterPro:AUX/IAA_dom |
| InterPro:Auxin_resp | InterPro:B3_DNA-bd | ncoils:Coil | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009725 | GO:GO:0009734 |
| GO:GO:0009987 | InterPro:IPR000270 | InterPro:IPR003340 | InterPro:IPR015300 | EnsemblPlants:OQU84350 | ProteinID:OQU84350 |
| ProteinID:OQU84350.1 | InterPro:PB1_dom | PFAM:PF02309 | PFAM:PF02362 | PFAM:PF06507 | PFscan:PS50863 |
| PFscan:PS51745 | PANTHER:PTHR31384 | PANTHER:PTHR31384:SF14 | SMART:SM01019 | EnsemblPlantsGene:SORBI_3004G037800 | SUPFAM:SSF101936 |
| SUPFAM:SSF54277 | UniParc:UPI000B8B9610 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr4:-:3057815..3065110
Molecular Weight (calculated)
119877.0 Da
IEP (calculated)
6.409
GRAVY (calculated)
-0.546
Length
1070 amino acids
Sequence
(BLAST)
(BLAST)
0001: MQKDIDAHVP SYPNLPSKLI CLLHSVTLHA DPDTDEVYAQ MTLQPVNTYG KEALQLSELA LKHARPQMEF FCKTLTASDT STHGGFSVPR RAAEKILPPL
0101: DFSMQPPAQE LQARDIHDNV WTFRHIFRGQ PKRHLLTTGW SLFVGGKRLF AGDSVIFVRD ERQQLLLGIR RASRQPTNIS SSVLSSDSMH IGVLAAAAHA
0201: AANNSPFTIF YNPRASPTEF VIPFAKYQKA LYSNQISLGM RFRMMFETEE LGMRRYMGTI TGISDLDPVR WKNSQWRNLQ VGWDESAAGE RRNRVSMWEI
0301: EPIAAPFFIC PQPFFGVKRP RQIDDESSEM ENLFKRAMPW LGEEICIKDA QTQNTTMPGL SLVQWMNMNR QQSSTLANTG IQSEYLRSLS NPAMQNLGAA
0401: ELARQLYVQN HLLQQNSVQL NASKLPQQMQ PINELAKGSL SCNQLDTITN HQELKQEVGN QQRQQQHINQ TIPLSQAQAN LVQAQVIIQT QMQQQQQQQQ
0501: QQPSPTRCQQ GTSEQQLLLS QQHQDQNFQL QQQQQLLLQE LQRQQQQNQQ QLNKLPGQLV NLAGQQAQLS DQELQLQLLQ KLQQQSLISQ PAVTLSRLPL
0601: MQEQQKLLLD MQQLSSSHSL AQQRIMPQQD SKVSLQASQA PPTMKQEQQK LSQKQVALAN VSDVAFQQIS STNVLSKAGS QLMIPGATQS VLTEEIPSCS
0701: TSPSTANNGN HLAHPTIGRN EHCKVNMEKV PQSSALMSIP TSSEAVTTPI MMKESSKLNH NLKENVITSK SPTVGTGHDN LLNIVPSTEN LETASSATSL
0801: WPTQTDGLLH QGFPTSNLNQ QQMFKDALAD VEIQEVDPTN NAFFGINNDG PLSFPMETEG LLVSALNPVK CQTNLSTDVE NNYRIQKDAQ QEISTSMVSQ
0901: SFGQSDIAFN SIDSAINDGA MLNRNSWPPA PPPQRMRTFT KVYKRGAVGR SIDIGRFSGY EELKHALARM FGIEGQLEDR QRIGWKLVYK DHEDDILLLG
1001: DDPWEEFVNC VKCIRILSPQ EVQQMSLDGD LGNNVLSNQA CSSSDGGNAW KPRCDQNPGN PSIGFYDQFE
0101: DFSMQPPAQE LQARDIHDNV WTFRHIFRGQ PKRHLLTTGW SLFVGGKRLF AGDSVIFVRD ERQQLLLGIR RASRQPTNIS SSVLSSDSMH IGVLAAAAHA
0201: AANNSPFTIF YNPRASPTEF VIPFAKYQKA LYSNQISLGM RFRMMFETEE LGMRRYMGTI TGISDLDPVR WKNSQWRNLQ VGWDESAAGE RRNRVSMWEI
0301: EPIAAPFFIC PQPFFGVKRP RQIDDESSEM ENLFKRAMPW LGEEICIKDA QTQNTTMPGL SLVQWMNMNR QQSSTLANTG IQSEYLRSLS NPAMQNLGAA
0401: ELARQLYVQN HLLQQNSVQL NASKLPQQMQ PINELAKGSL SCNQLDTITN HQELKQEVGN QQRQQQHINQ TIPLSQAQAN LVQAQVIIQT QMQQQQQQQQ
0501: QQPSPTRCQQ GTSEQQLLLS QQHQDQNFQL QQQQQLLLQE LQRQQQQNQQ QLNKLPGQLV NLAGQQAQLS DQELQLQLLQ KLQQQSLISQ PAVTLSRLPL
0601: MQEQQKLLLD MQQLSSSHSL AQQRIMPQQD SKVSLQASQA PPTMKQEQQK LSQKQVALAN VSDVAFQQIS STNVLSKAGS QLMIPGATQS VLTEEIPSCS
0701: TSPSTANNGN HLAHPTIGRN EHCKVNMEKV PQSSALMSIP TSSEAVTTPI MMKESSKLNH NLKENVITSK SPTVGTGHDN LLNIVPSTEN LETASSATSL
0801: WPTQTDGLLH QGFPTSNLNQ QQMFKDALAD VEIQEVDPTN NAFFGINNDG PLSFPMETEG LLVSALNPVK CQTNLSTDVE NNYRIQKDAQ QEISTSMVSQ
0901: SFGQSDIAFN SIDSAINDGA MLNRNSWPPA PPPQRMRTFT KVYKRGAVGR SIDIGRFSGY EELKHALARM FGIEGQLEDR QRIGWKLVYK DHEDDILLLG
1001: DDPWEEFVNC VKCIRILSPQ EVQQMSLDGD LGNNVLSNQA CSSSDGGNAW KPRCDQNPGN PSIGFYDQFE
0001: MKAPSNGFLP SSNEGEKKPI NSQLWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMQKQ TDFIPNYPNL PSKLICLLHS VTLHADTETD EVYAQMTLQP
0101: VNKYDREALL ASDMGLKLNR QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIVAKD LHDTTWTFRH IYRGQPKRHL LTTGWSVFVS
0201: TKRLFAGDSV LFVRDEKSQL MLGIRRANRQ TPTLSSSVIS SDSMHIGILA AAAHANANSS PFTIFFNPRA SPSEFVVPLA KYNKALYAQV SLGMRFRMMF
0301: ETEDCGVRRY MGTVTGISDL DPVRWKGSQW RNLQVGWDES TAGDRPSRVS IWEIEPVITP FYICPPPFFR PKYPRQPGMP DDELDMENAF KRAMPWMGED
0401: FGMKDAQSSM FPGLSLVQWM SMQQNNPLSG SATPQLPSAL SSFNLPNNFA SNDPSKLLNF QSPNLSSANS QFNKPNTVNH ISQQMQAQPA MVKSQQQQQQ
0501: QQQQHQHQQQ QLQQQQQLQM SQQQVQQQGI YNNGTIAVAN QVSCQSPNQP TGFSQSQLQQ QSMLPTGAKM THQNINSMGN KGLSQMTSFA QEMQFQQQLE
0601: MHNSSQLLRN QQEQSSLHSL QQNLSQNPQQ LQMQQQSSKP SPSQQLQLQL LQKLQQQQQQ QSIPPVSSSL QPQLSALQQT QSHQLQQLLS SQNQQPLAHG
0701: NNSFPASTFM QPPQIQVSPQ QQGQMSNKNL VAAGRSHSGH TDGEAPSCST SPSANNTGHD NVSPTNFLSR NQQQGQAASV SASDSVFERA SNPVQELYTK
0801: TESRISQGMM NMKSAGEHFR FKSAVTDQID VSTAGTTYCP DVVGPVQQQQ TFPLPSFGFD GDCQSHHPRN NLAFPGNLEA VTSDPLYSQK DFQNLVPNYG
0901: NTPRDIETEL SSAAISSQSF GIPSIPFKPG CSNEVGGIND SGIMNGGGLW PNQTQRMRTY TKVQKRGSVG RSIDVTRYSG YDELRHDLAR MFGIEGQLED
1001: PLTSDWKLVY TDHENDILLV GDDPWEEFVN CVQNIKILSS VEVQQMSLDG DLAAIPTTNQ ACSETDSGNA WKVHYEDTSA AASFNR
0101: VNKYDREALL ASDMGLKLNR QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIVAKD LHDTTWTFRH IYRGQPKRHL LTTGWSVFVS
0201: TKRLFAGDSV LFVRDEKSQL MLGIRRANRQ TPTLSSSVIS SDSMHIGILA AAAHANANSS PFTIFFNPRA SPSEFVVPLA KYNKALYAQV SLGMRFRMMF
0301: ETEDCGVRRY MGTVTGISDL DPVRWKGSQW RNLQVGWDES TAGDRPSRVS IWEIEPVITP FYICPPPFFR PKYPRQPGMP DDELDMENAF KRAMPWMGED
0401: FGMKDAQSSM FPGLSLVQWM SMQQNNPLSG SATPQLPSAL SSFNLPNNFA SNDPSKLLNF QSPNLSSANS QFNKPNTVNH ISQQMQAQPA MVKSQQQQQQ
0501: QQQQHQHQQQ QLQQQQQLQM SQQQVQQQGI YNNGTIAVAN QVSCQSPNQP TGFSQSQLQQ QSMLPTGAKM THQNINSMGN KGLSQMTSFA QEMQFQQQLE
0601: MHNSSQLLRN QQEQSSLHSL QQNLSQNPQQ LQMQQQSSKP SPSQQLQLQL LQKLQQQQQQ QSIPPVSSSL QPQLSALQQT QSHQLQQLLS SQNQQPLAHG
0701: NNSFPASTFM QPPQIQVSPQ QQGQMSNKNL VAAGRSHSGH TDGEAPSCST SPSANNTGHD NVSPTNFLSR NQQQGQAASV SASDSVFERA SNPVQELYTK
0801: TESRISQGMM NMKSAGEHFR FKSAVTDQID VSTAGTTYCP DVVGPVQQQQ TFPLPSFGFD GDCQSHHPRN NLAFPGNLEA VTSDPLYSQK DFQNLVPNYG
0901: NTPRDIETEL SSAAISSQSF GIPSIPFKPG CSNEVGGIND SGIMNGGGLW PNQTQRMRTY TKVQKRGSVG RSIDVTRYSG YDELRHDLAR MFGIEGQLED
1001: PLTSDWKLVY TDHENDILLV GDDPWEEFVN CVQNIKILSS VEVQQMSLDG DLAAIPTTNQ ACSETDSGNA WKVHYEDTSA AASFNR
Arabidopsis Description
ARF19Auxin response factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q8RYC8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.