Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU84350 | Sorghum | nucleus | 86.45 | 88.22 |
| TraesCS6B01G141300.2 | Wheat | nucleus | 77.2 | 74.54 |
| TraesCS6D01G102300.1 | Wheat | nucleus | 77.01 | 74.49 |
| TraesCS6A01G113000.1 | Wheat | nucleus | 77.29 | 74.36 |
| HORVU6Hr1G020330.30 | Barley | nucleus | 77.56 | 74.23 |
| Os02t0141100-00 | Rice | nucleus | 74.45 | 72.85 |
| Zm00001d014690_P014 | Maize | nucleus | 71.15 | 65.08 |
| GSMUA_Achr3P05460_001 | Banana | nucleus | 56.78 | 63.72 |
| GSMUA_Achr9P14090_001 | Banana | nucleus | 52.01 | 62.42 |
| GSMUA_Achr5P05010_001 | Banana | nucleus | 45.51 | 57.06 |
| GSMUA_Achr8P23850_001 | Banana | nucleus | 55.22 | 56.51 |
| VIT_11s0065g00310.t01 | Wine grape | nucleus | 55.22 | 54.08 |
| Zm00001d031522_P007 | Maize | nucleus | 50.92 | 51.2 |
| Solyc07g016180.2.1 | Tomato | nucleus | 51.74 | 50.81 |
| PGSC0003DMT400025312 | Potato | nucleus | 51.56 | 50.54 |
| KRH49070 | Soybean | nucleus | 49.82 | 49.01 |
| PGSC0003DMT400035592 | Potato | nucleus | 48.9 | 48.68 |
| Solyc05g047460.2.1 | Tomato | nucleus | 48.81 | 48.59 |
| KRH74145 | Soybean | nucleus | 48.63 | 48.1 |
| KRH60117 | Soybean | nucleus | 46.98 | 46.68 |
| KRH41404 | Soybean | nucleus | 46.89 | 46.0 |
| Zm00001d045026_P002 | Maize | nucleus | 39.65 | 41.12 |
| Zm00001d001879_P036 | Maize | nucleus | 29.4 | 39.29 |
| Zm00001d014377_P002 | Maize | nucleus | 32.69 | 38.93 |
| Zm00001d053819_P002 | Maize | nucleus | 32.33 | 38.41 |
| Zm00001d041497_P005 | Maize | nucleus | 30.13 | 37.05 |
| Zm00001d036593_P001 | Maize | plastid | 32.51 | 36.98 |
| Zm00001d031064_P003 | Maize | nucleus | 30.04 | 36.57 |
| Zm00001d026590_P003 | Maize | nucleus | 27.29 | 35.14 |
| Zm00001d050781_P001 | Maize | nucleus | 19.96 | 34.6 |
| Zm00001d016838_P001 | Maize | nucleus | 20.7 | 32.15 |
| Zm00001d001945_P002 | Maize | nucleus | 27.38 | 31.54 |
| Zm00001d003601_P006 | Maize | nucleus | 19.32 | 30.94 |
| Zm00001d026540_P002 | Maize | nucleus | 26.92 | 30.66 |
| Zm00001d011953_P002 | Maize | nucleus | 20.97 | 28.41 |
| Zm00001d042267_P003 | Maize | nucleus | 21.06 | 28.12 |
| Zm00001d023659_P007 | Maize | nucleus | 21.25 | 28.09 |
| Zm00001d041056_P019 | Maize | nucleus | 21.25 | 27.49 |
| Zm00001d039267_P005 | Maize | nucleus | 16.48 | 26.01 |
| Zm00001d049295_P001 | Maize | nucleus | 20.79 | 25.91 |
| Zm00001d052637_P001 | Maize | mitochondrion | 1.83 | 24.39 |
Protein Annotations
| MapMan:15.5.5.1 | Gene3D:2.30.30.1040 | Gene3D:2.40.330.10 | Gene3D:3.10.20.90 | UniProt:A0A1D6H0D1 | ProteinID:AQK68400.1 |
| InterPro:AUX/IAA_dom | InterPro:Auxin_resp | InterPro:B3_DNA-bd | ncoils:Coil | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009725 |
| GO:GO:0009734 | GO:GO:0009987 | InterPro:IPR000270 | InterPro:IPR003340 | InterPro:IPR015300 | InterPro:PB1_dom |
| PFAM:PF02309 | PFAM:PF02362 | PFAM:PF06507 | PFscan:PS50863 | PFscan:PS51745 | PANTHER:PTHR31384 |
| PANTHER:PTHR31384:SF14 | SMART:SM01019 | SUPFAM:SSF101936 | SUPFAM:SSF54277 | UniParc:UPI0008459068 | EnsemblPlantsGene:Zm00001d015243 |
| EnsemblPlants:Zm00001d015243_P001 | EnsemblPlants:Zm00001d015243_T001 | SEG:seg | : | : | : |
Description
ARF-transcription factor 20Auxin response factor 20
Coordinates
chr5:-:80676960..80685231
Molecular Weight (calculated)
121313.0 Da
IEP (calculated)
5.746
GRAVY (calculated)
-0.474
Length
1092 amino acids
Sequence
(BLAST)
(BLAST)
0001: MKQSPASSGV TAAPVVPAPA PAAASTGAAP PCEGERKAPA INADLWYACA GPLVSLPPVG SLVVYFPQGH SEQVAASMQK DIDAHVPSYP NLPSKLICLL
0101: HSVTLHADPD TDEVYAQMTL QPVNTYGKEA LQLSELALKH ARPQMEFFCK TLTASDTSTH GGFSVPRRAA EKILPPLDFG MQPPAQELQA RDIHDNVWTF
0201: RHIFRGQPKR HLLTTGWSLF VGGKRLFAGD SVIFVRASPT EFVIPFAKFQ KALYSNQISL GMRFRMMFET EELGMRRYMG TITGITDLDP VRWKNSQWRN
0301: LQVGWDESAA GERRNRVSMW EIEPIAAPFF ICPQPFFGVK RPRQIDDESS EMENLFKRAM PWLGEEICIK DAQTHNTTMP GLSLVQWMNM NRPQSSTLNT
0401: GIQSEYLRSL SNPAMQNLGA AELARQLYVQ NHLLQQNSVQ LNASKLPQQV QPINELAKGS LSCNQLDVII NQQELKQEVG NQQRQQQPVN QAIPLSQAQT
0501: NLVQAQVIIQ NQMQQQQQQQ QQSPTRCQKG TSVQQLLLSQ QQQDQNFQLQ QQQQLLLQQL QQQNQQQQQQ QQNQQQLNKL PAQLVNLAGQ QAQLSDQELQ
0601: LQLLQKLQQQ SLVSQPTVTL SPLQVIQEQQ KLLLDMQQLS SSHSLAQQRI LPQQDSDVSL QASQAPPPMK QEQQKPSQKQ FVLADVSDVV YPQISSTNVL
0701: SKAGTQLMTP GATQSVLTEE IPSCSTSPST ATGNHLAYPI IGRNEHCKVT IEKVPQSSSL MSIPTAGEAV TTPIMAKELS KLNHNLKENV TTSKSPIVGT
0801: GHENLLNIVP STDNLETASS ATSLWPTQTD GLLHQGFPTN FNQQQMFKDA LPDVEIQEVD PTNNAFFGIN SDGPLGFPME TEGLLVSAIN PVKCQPNLST
0901: DVEINYRIQK DAQQEISTSM VSQSFGQSDI AFNSIDSAIN DGVMLNRNSC PPAPPQRMRT FTKVYKRGAV GRSIDIGRFS GYEELKHAVA RMFGIEGQLE
1001: DRQRIGWKLV YTDHEDDVLL LGDDPWEEFV NCVKCIRILS PQEVQQMSLD GDLGNNVLSN QACSSSDGGN AWKPRRDQNP GNPSIGFYDQ FE
0101: HSVTLHADPD TDEVYAQMTL QPVNTYGKEA LQLSELALKH ARPQMEFFCK TLTASDTSTH GGFSVPRRAA EKILPPLDFG MQPPAQELQA RDIHDNVWTF
0201: RHIFRGQPKR HLLTTGWSLF VGGKRLFAGD SVIFVRASPT EFVIPFAKFQ KALYSNQISL GMRFRMMFET EELGMRRYMG TITGITDLDP VRWKNSQWRN
0301: LQVGWDESAA GERRNRVSMW EIEPIAAPFF ICPQPFFGVK RPRQIDDESS EMENLFKRAM PWLGEEICIK DAQTHNTTMP GLSLVQWMNM NRPQSSTLNT
0401: GIQSEYLRSL SNPAMQNLGA AELARQLYVQ NHLLQQNSVQ LNASKLPQQV QPINELAKGS LSCNQLDVII NQQELKQEVG NQQRQQQPVN QAIPLSQAQT
0501: NLVQAQVIIQ NQMQQQQQQQ QQSPTRCQKG TSVQQLLLSQ QQQDQNFQLQ QQQQLLLQQL QQQNQQQQQQ QQNQQQLNKL PAQLVNLAGQ QAQLSDQELQ
0601: LQLLQKLQQQ SLVSQPTVTL SPLQVIQEQQ KLLLDMQQLS SSHSLAQQRI LPQQDSDVSL QASQAPPPMK QEQQKPSQKQ FVLADVSDVV YPQISSTNVL
0701: SKAGTQLMTP GATQSVLTEE IPSCSTSPST ATGNHLAYPI IGRNEHCKVT IEKVPQSSSL MSIPTAGEAV TTPIMAKELS KLNHNLKENV TTSKSPIVGT
0801: GHENLLNIVP STDNLETASS ATSLWPTQTD GLLHQGFPTN FNQQQMFKDA LPDVEIQEVD PTNNAFFGIN SDGPLGFPME TEGLLVSAIN PVKCQPNLST
0901: DVEINYRIQK DAQQEISTSM VSQSFGQSDI AFNSIDSAIN DGVMLNRNSC PPAPPQRMRT FTKVYKRGAV GRSIDIGRFS GYEELKHAVA RMFGIEGQLE
1001: DRQRIGWKLV YTDHEDDVLL LGDDPWEEFV NCVKCIRILS PQEVQQMSLD GDLGNNVLSN QACSSSDGGN AWKPRRDQNP GNPSIGFYDQ FE
0001: MKAPSNGFLP SSNEGEKKPI NSQLWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMQKQ TDFIPNYPNL PSKLICLLHS VTLHADTETD EVYAQMTLQP
0101: VNKYDREALL ASDMGLKLNR QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIVAKD LHDTTWTFRH IYRGQPKRHL LTTGWSVFVS
0201: TKRLFAGDSV LFVRDEKSQL MLGIRRANRQ TPTLSSSVIS SDSMHIGILA AAAHANANSS PFTIFFNPRA SPSEFVVPLA KYNKALYAQV SLGMRFRMMF
0301: ETEDCGVRRY MGTVTGISDL DPVRWKGSQW RNLQVGWDES TAGDRPSRVS IWEIEPVITP FYICPPPFFR PKYPRQPGMP DDELDMENAF KRAMPWMGED
0401: FGMKDAQSSM FPGLSLVQWM SMQQNNPLSG SATPQLPSAL SSFNLPNNFA SNDPSKLLNF QSPNLSSANS QFNKPNTVNH ISQQMQAQPA MVKSQQQQQQ
0501: QQQQHQHQQQ QLQQQQQLQM SQQQVQQQGI YNNGTIAVAN QVSCQSPNQP TGFSQSQLQQ QSMLPTGAKM THQNINSMGN KGLSQMTSFA QEMQFQQQLE
0601: MHNSSQLLRN QQEQSSLHSL QQNLSQNPQQ LQMQQQSSKP SPSQQLQLQL LQKLQQQQQQ QSIPPVSSSL QPQLSALQQT QSHQLQQLLS SQNQQPLAHG
0701: NNSFPASTFM QPPQIQVSPQ QQGQMSNKNL VAAGRSHSGH TDGEAPSCST SPSANNTGHD NVSPTNFLSR NQQQGQAASV SASDSVFERA SNPVQELYTK
0801: TESRISQGMM NMKSAGEHFR FKSAVTDQID VSTAGTTYCP DVVGPVQQQQ TFPLPSFGFD GDCQSHHPRN NLAFPGNLEA VTSDPLYSQK DFQNLVPNYG
0901: NTPRDIETEL SSAAISSQSF GIPSIPFKPG CSNEVGGIND SGIMNGGGLW PNQTQRMRTY TKVQKRGSVG RSIDVTRYSG YDELRHDLAR MFGIEGQLED
1001: PLTSDWKLVY TDHENDILLV GDDPWEEFVN CVQNIKILSS VEVQQMSLDG DLAAIPTTNQ ACSETDSGNA WKVHYEDTSA AASFNR
0101: VNKYDREALL ASDMGLKLNR QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIVAKD LHDTTWTFRH IYRGQPKRHL LTTGWSVFVS
0201: TKRLFAGDSV LFVRDEKSQL MLGIRRANRQ TPTLSSSVIS SDSMHIGILA AAAHANANSS PFTIFFNPRA SPSEFVVPLA KYNKALYAQV SLGMRFRMMF
0301: ETEDCGVRRY MGTVTGISDL DPVRWKGSQW RNLQVGWDES TAGDRPSRVS IWEIEPVITP FYICPPPFFR PKYPRQPGMP DDELDMENAF KRAMPWMGED
0401: FGMKDAQSSM FPGLSLVQWM SMQQNNPLSG SATPQLPSAL SSFNLPNNFA SNDPSKLLNF QSPNLSSANS QFNKPNTVNH ISQQMQAQPA MVKSQQQQQQ
0501: QQQQHQHQQQ QLQQQQQLQM SQQQVQQQGI YNNGTIAVAN QVSCQSPNQP TGFSQSQLQQ QSMLPTGAKM THQNINSMGN KGLSQMTSFA QEMQFQQQLE
0601: MHNSSQLLRN QQEQSSLHSL QQNLSQNPQQ LQMQQQSSKP SPSQQLQLQL LQKLQQQQQQ QSIPPVSSSL QPQLSALQQT QSHQLQQLLS SQNQQPLAHG
0701: NNSFPASTFM QPPQIQVSPQ QQGQMSNKNL VAAGRSHSGH TDGEAPSCST SPSANNTGHD NVSPTNFLSR NQQQGQAASV SASDSVFERA SNPVQELYTK
0801: TESRISQGMM NMKSAGEHFR FKSAVTDQID VSTAGTTYCP DVVGPVQQQQ TFPLPSFGFD GDCQSHHPRN NLAFPGNLEA VTSDPLYSQK DFQNLVPNYG
0901: NTPRDIETEL SSAAISSQSF GIPSIPFKPG CSNEVGGIND SGIMNGGGLW PNQTQRMRTY TKVQKRGSVG RSIDVTRYSG YDELRHDLAR MFGIEGQLED
1001: PLTSDWKLVY TDHENDILLV GDDPWEEFVN CVQNIKILSS VEVQQMSLDG DLAAIPTTNQ ACSETDSGNA WKVHYEDTSA AASFNR
Arabidopsis Description
ARF19Auxin response factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q8RYC8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.