Factsheet for Zm00001d052637_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 1
mitochondrion 4
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d014377_P002	Maize	nucleus	98.78	8.83
Zm00001d036593_P001	Maize	plastid	89.02	7.6
Zm00001d053819_P002	Maize	nucleus	76.83	6.86
Zm00001d041497_P005	Maize	nucleus	62.2	5.74
Zm00001d031064_P003	Maize	nucleus	62.2	5.69
Zm00001d001879_P036	Maize	nucleus	53.66	5.39
Zm00001d026590_P003	Maize	nucleus	50.0	4.83
Zm00001d045026_P002	Maize	nucleus	29.27	2.28
Zm00001d031522_P007	Maize	nucleus	25.61	1.93
Zm00001d015243_P001	Maize	nucleus	24.39	1.83
Zm00001d039267_P005	Maize	nucleus	14.63	1.73
Zm00001d014690_P014	Maize	nucleus	21.95	1.51
Zm00001d003601_P006	Maize	nucleus	12.2	1.47
Zm00001d050781_P001	Maize	nucleus	10.98	1.43
Zm00001d023659_P007	Maize	nucleus	13.41	1.33
Zm00001d041056_P019	Maize	nucleus	13.41	1.3
Zm00001d016838_P001	Maize	nucleus	10.98	1.28
Zm00001d049295_P001	Maize	nucleus	13.41	1.26
Zm00001d011953_P002	Maize	nucleus	12.2	1.24
Zm00001d042267_P003	Maize	nucleus	9.76	0.98
Zm00001d026540_P002	Maize	nucleus	10.98	0.94
Zm00001d001945_P002	Maize	nucleus	9.76	0.84
PGSC0003DMT400048032	Potato	nucleus	0.0	0.0

Protein Annotations

MapMan:35.1	UniProt:A0A1D6QI74	ProteinID:AQK57562.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009719	GO:GO:0009725	GO:GO:0009734	GO:GO:0009987	PANTHER:PTHR31384
PANTHER:PTHR31384:SF22	UniParc:UPI000221C212	EnsemblPlantsGene:Zm00001d052637	EnsemblPlants:Zm00001d052637_P001	EnsemblPlants:Zm00001d052637_T001	:

Description

No Description!

Coordinates

chr4:+:195493984..195495108

Molecular Weight (calculated)

9066.0 Da

IEP (calculated)

7.535

GRAVY (calculated)

-0.224

Length

82 amino acids

Sequence
(BLAST)

1: MYPSPFPLRL KRPWPTGLPS LHGGKDDDLA NSLMWLRDTA TPGFQSLNFG GLGMSPWMQP RLDATLLGLQ PDMYQAMATA AF

Best Arabidopsis Sequence Match ( AT1G30330.1 )
(BLAST)

001: MRLSSAGFNP QPHEGEKRVL NSELWHACAG PLVSLPPVGS RVVYFPQGHS EQVAASTNKE VDAHIPNYPS LHPQLICQLH NVTMHADVET DEVYAQMTLQ
101: PLNAQEQKDP YLPAELGVPS RQPTNYFCKT LTASDTSTHG GFSVPRRAAE KVFPPLDYSQ QPPAQELMAR DLHDNEWKFR HIFRGQPKRH LLTTGWSVFV
201: SAKRLVAGDS VLFIWNDKNQ LLLGIRRANR PQTVMPSSVL SSDSMHLGLL AAAAHAAATN SRFTIFYNPR ASPSEFVIPL AKYVKAVYHT RVSVGMRFRM
301: LFETEESSVR RYMGTITGIC DLDPTRWANS HWRSVKVGWD ESTAGERQPR VSLWEIEPLT TFPMYPSPFP LRLKRPWPPG LPSFHGLKED DMGMSMSSPL
401: MWDRGLQSLN FQGMGVNPWM QPRLDTSGLL GMQNDVYQAM AAAALQDMRG IDPAKAAASL LQFQNSPGFS MQSPSLVQPQ MLQQQLSQQQ QQLSQQQQQQ
501: QQLSQQQQQQ LSQQQQQQLS QQQQQQLSQQ QQQQAYLGVP ETHQPQSQAQ SQSNNHLSQQ QQQVVDNHNP SASSAAVVSA MSQFGSASQP NTSPLQSMTS
601: LCHQQSFSDT NGGNNPISPL HTLLSNFSQD ESSQLLHLTR TNSAMTSSGW PSKRPAVDSS FQHSGAGNNN TQSVLEQLGQ SHTSNVPPNA VSLPPFPGGR
701: ECSIEQEGSA SDPHSHLLFG VNIDSSSLLM PNGMSNLRSI GIEGGDSTTL PFTSSNFNND FSGNLAMTTP SSCIDESGFL QSSENLGSEN PQSNTFVKVY
801: KSGSFGRSLD ISKFSSYHEL RSELARMFGL EGQLEDPVRS GWQLVFVDRE NDVLLLGDDP WPEFVSSVWC IKILSPQEVQ QMGKRGLELL NSAPSSNNVD
901: KLPSNGNCDD FGNRSDPRNL GNGIASVGGS FNY

Arabidopsis Description

ARF6Auxin response factor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZTX8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.