Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES04575 | Sorghum | nucleus | 93.69 | 94.51 |
| KRH58711 | Soybean | nucleus | 36.89 | 86.26 |
| Os02t0164900-01 | Rice | nucleus | 81.72 | 82.71 |
| TraesCS6A01G138600.4 | Wheat | nucleus | 80.3 | 79.53 |
| TraesCS6B01G167100.1 | Wheat | nucleus | 80.09 | 79.4 |
| TraesCS6D01G127600.2 | Wheat | nucleus | 79.98 | 79.29 |
| HORVU6Hr1G026730.9 | Barley | nucleus | 80.09 | 79.22 |
| Zm00001d014377_P002 | Maize | nucleus | 76.82 | 76.99 |
| Zm00001d052637_P001 | Maize | mitochondrion | 6.86 | 76.83 |
| Zm00001d036593_P001 | Maize | plastid | 75.08 | 71.88 |
| GSMUA_Achr11P... | Banana | nucleus | 60.5 | 67.07 |
| GSMUA_Achr5P00590_001 | Banana | nucleus | 66.16 | 66.89 |
| VIT_10s0003g04100.t01 | Wine grape | nucleus | 64.74 | 65.53 |
| GSMUA_Achr6P19850_001 | Banana | nucleus | 60.28 | 64.8 |
| KRH11131 | Soybean | nucleus | 62.57 | 64.03 |
| KRH21113 | Soybean | nucleus | 62.35 | 63.95 |
| CDY02285 | Canola | nucleus | 60.5 | 63.69 |
| CDY12048 | Canola | nucleus | 58.43 | 63.4 |
| Bra010776.1-P | Field mustard | nucleus | 57.34 | 63.34 |
| CDX90245 | Canola | nucleus | 58.65 | 63.26 |
| CDY09598 | Canola | nucleus | 59.63 | 62.99 |
| KRH42603 | Soybean | nucleus | 61.59 | 62.54 |
| AT1G30330.3 | Thale cress | nucleus | 61.81 | 60.75 |
| Zm00001d001879_P036 | Maize | nucleus | 53.21 | 59.85 |
| Zm00001d031064_P003 | Maize | nucleus | 58.32 | 59.75 |
| Zm00001d041497_P005 | Maize | nucleus | 57.67 | 59.68 |
| Zm00001d026590_P003 | Maize | nucleus | 51.14 | 55.42 |
| Zm00001d045026_P002 | Maize | nucleus | 45.27 | 39.51 |
| Zm00001d050781_P001 | Maize | nucleus | 26.33 | 38.41 |
| Zm00001d031522_P007 | Maize | nucleus | 42.11 | 35.64 |
| Zm00001d003601_P006 | Maize | nucleus | 26.12 | 35.19 |
| Zm00001d016838_P001 | Maize | nucleus | 26.88 | 35.14 |
| Zm00001d001945_P002 | Maize | nucleus | 35.58 | 34.49 |
| Zm00001d026540_P002 | Maize | nucleus | 35.91 | 34.41 |
| Zm00001d014690_P014 | Maize | nucleus | 42.66 | 32.83 |
| Zm00001d015243_P001 | Maize | nucleus | 38.41 | 32.33 |
| Zm00001d011953_P002 | Maize | nucleus | 27.86 | 31.76 |
| Zm00001d042267_P003 | Maize | nucleus | 28.18 | 31.66 |
| Zm00001d023659_P007 | Maize | nucleus | 28.18 | 31.36 |
| Zm00001d041056_P019 | Maize | nucleus | 27.97 | 30.45 |
| Zm00001d049295_P001 | Maize | nucleus | 27.75 | 29.11 |
| Zm00001d039267_P005 | Maize | nucleus | 21.11 | 28.03 |
Protein Annotations
| EntrezGene:103654892 | MapMan:15.5.5.1 | Gene3D:2.30.30.1040 | Gene3D:2.40.330.10 | Gene3D:3.10.20.90 | UniProt:A0A1D6QSK8 |
| ProteinID:AQK60455.1 | InterPro:AUX/IAA_dom | InterPro:Auxin_resp | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009725 |
| GO:GO:0009734 | GO:GO:0009987 | InterPro:IPR000270 | InterPro:IPR003340 | InterPro:IPR015300 | InterPro:PB1_dom |
| PFAM:PF02309 | PFAM:PF02362 | PFAM:PF06507 | PFscan:PS50863 | PFscan:PS51745 | PANTHER:PTHR31384 |
| PANTHER:PTHR31384:SF22 | SMART:SM01019 | SUPFAM:SSF101936 | SUPFAM:SSF54277 | UniParc:UPI00084527BC | EnsemblPlantsGene:Zm00001d053819 |
| EnsemblPlants:Zm00001d053819_P002 | EnsemblPlants:Zm00001d053819_T002 | SEG:seg | : | : | : |
Description
ARF-transcription factor 16Auxin response factor 6
Coordinates
chr4:-:241710056..241716042
Molecular Weight (calculated)
101549.0 Da
IEP (calculated)
6.098
GRAVY (calculated)
-0.427
Length
919 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLSPSASGG LQDQPASPEE AEEHKCLNSE LWHACAGPLV SLPSVGSRVV YFPQGHGEQV AASTNKEMEA QIPNYPSLPP QLICQLHNVT MHADAETDEV
101: YAQMTLQPLS PQELKDPFLP AELGTASNQP TNYFCKTLTA SDTSTHGGFS VPRRAAEKVF PPLDFNQQPP AQELIAKDLH GNDWKFRHIF RGQPKRHLLT
201: TGWSVFVSAK RLVAGDSVLF IWNDNNQLLL GIRRANRPQT VMPSSVLSSD SMHIGLLAAA AHAASTNSRF TIFYNPRASP CEFVIPMAKY VKAVYHTRIS
301: VGMRFRMLFE TEESSVRRYV KPIYMGTITG ISDLDPVRWP NSHWRSVKVG WDESTAGEKQ PRVSLWEIEP LTTFPMYPSP FALGLKRPWP AGLPSLYGGR
401: GDGLTSSLMW LRDRANPGFQ SLNFSGLGMS PWMQPRLDNS LLGLQSDMYQ TIAAAAALQS TTKQVPPSAM QFQQPQNIAD RSALLSSQIL QQVQPRFQQI
501: YPQNLNENKI QGHTQPEYLQ VQQQLQRCQS FNEQKPPMHP QQQQQEPQQQ QCVQTPQDQQ MQEQKHLHNF HSLPDALSAF SQLSPATHSP PSALQTVPAF
601: SHQQNFPDTN ISSLSPSTGP SMHGMLGRLP SEAASSLPCV AMNAPVSVSD PWSSKRVAVE SVNPCRPHVS PHIEHLDMAT CNMPQSSALA PLPGRECLVD
701: EDGCSDPQNH LLFGVHIDSH SLLMQGGIPA LQNDNSSGTI PYSTSNFLSP SENDFPLNQP LRSAGCLDES DYLPCAENAE QANQQFATFV KVYKSGTVGR
801: LLDITRFSSY DELRSEVGRL FGLEGQLEDP LRSGWQLVFV DREDDVLLVG DDPWQEFVNS VSCIKILSPE EVQRMGKPGI QLLSSAPSRR LGNGCDSYAS
901: MQEPRGLDAG MAPVGSVEF
101: YAQMTLQPLS PQELKDPFLP AELGTASNQP TNYFCKTLTA SDTSTHGGFS VPRRAAEKVF PPLDFNQQPP AQELIAKDLH GNDWKFRHIF RGQPKRHLLT
201: TGWSVFVSAK RLVAGDSVLF IWNDNNQLLL GIRRANRPQT VMPSSVLSSD SMHIGLLAAA AHAASTNSRF TIFYNPRASP CEFVIPMAKY VKAVYHTRIS
301: VGMRFRMLFE TEESSVRRYV KPIYMGTITG ISDLDPVRWP NSHWRSVKVG WDESTAGEKQ PRVSLWEIEP LTTFPMYPSP FALGLKRPWP AGLPSLYGGR
401: GDGLTSSLMW LRDRANPGFQ SLNFSGLGMS PWMQPRLDNS LLGLQSDMYQ TIAAAAALQS TTKQVPPSAM QFQQPQNIAD RSALLSSQIL QQVQPRFQQI
501: YPQNLNENKI QGHTQPEYLQ VQQQLQRCQS FNEQKPPMHP QQQQQEPQQQ QCVQTPQDQQ MQEQKHLHNF HSLPDALSAF SQLSPATHSP PSALQTVPAF
601: SHQQNFPDTN ISSLSPSTGP SMHGMLGRLP SEAASSLPCV AMNAPVSVSD PWSSKRVAVE SVNPCRPHVS PHIEHLDMAT CNMPQSSALA PLPGRECLVD
701: EDGCSDPQNH LLFGVHIDSH SLLMQGGIPA LQNDNSSGTI PYSTSNFLSP SENDFPLNQP LRSAGCLDES DYLPCAENAE QANQQFATFV KVYKSGTVGR
801: LLDITRFSSY DELRSEVGRL FGLEGQLEDP LRSGWQLVFV DREDDVLLVG DDPWQEFVNS VSCIKILSPE EVQRMGKPGI QLLSSAPSRR LGNGCDSYAS
901: MQEPRGLDAG MAPVGSVEF
0001: MKAPSNGFLP SSNEGEKKPI NSQLWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMQKQ TDFIPNYPNL PSKLICLLHS VTLHADTETD EVYAQMTLQP
0101: VNKYDREALL ASDMGLKLNR QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIVAKD LHDTTWTFRH IYRGQPKRHL LTTGWSVFVS
0201: TKRLFAGDSV LFVRDEKSQL MLGIRRANRQ TPTLSSSVIS SDSMHIGILA AAAHANANSS PFTIFFNPRA SPSEFVVPLA KYNKALYAQV SLGMRFRMMF
0301: ETEDCGVRRY MGTVTGISDL DPVRWKGSQW RNLQVGWDES TAGDRPSRVS IWEIEPVITP FYICPPPFFR PKYPRQPGMP DDELDMENAF KRAMPWMGED
0401: FGMKDAQSSM FPGLSLVQWM SMQQNNPLSG SATPQLPSAL SSFNLPNNFA SNDPSKLLNF QSPNLSSANS QFNKPNTVNH ISQQMQAQPA MVKSQQQQQQ
0501: QQQQHQHQQQ QLQQQQQLQM SQQQVQQQGI YNNGTIAVAN QVSCQSPNQP TGFSQSQLQQ QSMLPTGAKM THQNINSMGN KGLSQMTSFA QEMQFQQQLE
0601: MHNSSQLLRN QQEQSSLHSL QQNLSQNPQQ LQMQQQSSKP SPSQQLQLQL LQKLQQQQQQ QSIPPVSSSL QPQLSALQQT QSHQLQQLLS SQNQQPLAHG
0701: NNSFPASTFM QPPQIQVSPQ QQGQMSNKNL VAAGRSHSGH TDGEAPSCST SPSANNTGHD NVSPTNFLSR NQQQGQAASV SASDSVFERA SNPVQELYTK
0801: TESRISQGMM NMKSAGEHFR FKSAVTDQID VSTAGTTYCP DVVGPVQQQQ TFPLPSFGFD GDCQSHHPRN NLAFPGNLEA VTSDPLYSQK DFQNLVPNYG
0901: NTPRDIETEL SSAAISSQSF GIPSIPFKPG CSNEVGGIND SGIMNGGGLW PNQTQRMRTY TKVQKRGSVG RSIDVTRYSG YDELRHDLAR MFGIEGQLED
1001: PLTSDWKLVY TDHENDILLV GDDPWEEFVN CVQNIKILSS VEVQQMSLDG DLAAIPTTNQ ACSETDSGNA WKVHYEDTSA AASFNR
0101: VNKYDREALL ASDMGLKLNR QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIVAKD LHDTTWTFRH IYRGQPKRHL LTTGWSVFVS
0201: TKRLFAGDSV LFVRDEKSQL MLGIRRANRQ TPTLSSSVIS SDSMHIGILA AAAHANANSS PFTIFFNPRA SPSEFVVPLA KYNKALYAQV SLGMRFRMMF
0301: ETEDCGVRRY MGTVTGISDL DPVRWKGSQW RNLQVGWDES TAGDRPSRVS IWEIEPVITP FYICPPPFFR PKYPRQPGMP DDELDMENAF KRAMPWMGED
0401: FGMKDAQSSM FPGLSLVQWM SMQQNNPLSG SATPQLPSAL SSFNLPNNFA SNDPSKLLNF QSPNLSSANS QFNKPNTVNH ISQQMQAQPA MVKSQQQQQQ
0501: QQQQHQHQQQ QLQQQQQLQM SQQQVQQQGI YNNGTIAVAN QVSCQSPNQP TGFSQSQLQQ QSMLPTGAKM THQNINSMGN KGLSQMTSFA QEMQFQQQLE
0601: MHNSSQLLRN QQEQSSLHSL QQNLSQNPQQ LQMQQQSSKP SPSQQLQLQL LQKLQQQQQQ QSIPPVSSSL QPQLSALQQT QSHQLQQLLS SQNQQPLAHG
0701: NNSFPASTFM QPPQIQVSPQ QQGQMSNKNL VAAGRSHSGH TDGEAPSCST SPSANNTGHD NVSPTNFLSR NQQQGQAASV SASDSVFERA SNPVQELYTK
0801: TESRISQGMM NMKSAGEHFR FKSAVTDQID VSTAGTTYCP DVVGPVQQQQ TFPLPSFGFD GDCQSHHPRN NLAFPGNLEA VTSDPLYSQK DFQNLVPNYG
0901: NTPRDIETEL SSAAISSQSF GIPSIPFKPG CSNEVGGIND SGIMNGGGLW PNQTQRMRTY TKVQKRGSVG RSIDVTRYSG YDELRHDLAR MFGIEGQLED
1001: PLTSDWKLVY TDHENDILLV GDDPWEEFVN CVQNIKILSS VEVQQMSLDG DLAAIPTTNQ ACSETDSGNA WKVHYEDTSA AASFNR
Arabidopsis Description
ARF19Auxin response factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q8RYC8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.