Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH58711 | Soybean | nucleus | 37.57 | 87.28 |
| GSMUA_Achr5P26580_001 | Banana | nucleus | 73.49 | 83.15 |
| GSMUA_Achr3P23290_001 | Banana | nucleus | 72.4 | 80.61 |
| GSMUA_Achr8P13630_001 | Banana | cytosol, nucleus, plastid | 25.63 | 78.26 |
| GSMUA_Achr5P00590_001 | Banana | nucleus | 73.49 | 73.82 |
| GSMUA_Achr11P... | Banana | nucleus | 64.73 | 71.29 |
| GSMUA_Achr5P02450_001 | Banana | nucleus | 64.62 | 71.26 |
| GSMUA_Achr6P19850_001 | Banana | nucleus | 66.37 | 70.88 |
| VIT_10s0003g04100.t01 | Wine grape | nucleus | 69.77 | 70.15 |
| KRH11131 | Soybean | nucleus | 66.92 | 68.04 |
| KRH21113 | Soybean | nucleus | 66.37 | 67.63 |
| CDY02285 | Canola | nucleus | 63.64 | 66.55 |
| Bra010776.1-P | Field mustard | nucleus | 60.24 | 66.11 |
| KRH42603 | Soybean | nucleus | 65.28 | 65.86 |
| CDX90245 | Canola | nucleus | 61.45 | 65.85 |
| CDY12048 | Canola | nucleus | 61.01 | 65.76 |
| CDY09598 | Canola | nucleus | 62.65 | 65.75 |
| AT1G30330.3 | Thale cress | nucleus | 65.72 | 64.17 |
| Os12t0613700-01 | Rice | nucleus | 61.34 | 62.29 |
| EES17392 | Sorghum | nucleus | 60.13 | 61.34 |
| HORVU5Hr1G009650.20 | Barley | nucleus | 59.8 | 61.28 |
| TraesCS5B01G039800.1 | Wheat | nucleus | 59.69 | 61.17 |
| TraesCS5D01G045700.2 | Wheat | nucleus | 59.91 | 60.78 |
| TraesCS5A01G038300.2 | Wheat | nucleus | 59.8 | 60.73 |
| Zm00001d041497_P005 | Maize | nucleus | 58.71 | 60.36 |
| Zm00001d031064_P003 | Maize | nucleus | 58.93 | 59.98 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 33.41 | 59.69 |
| GSMUA_Achr4P25960_001 | Banana | nucleus | 51.7 | 58.93 |
| GSMUA_Achr11P... | Banana | nucleus | 51.81 | 58.4 |
| GSMUA_Achr1P08230_001 | Banana | mitochondrion | 36.69 | 50.45 |
| GSMUA_Achr3P10240_001 | Banana | nucleus | 31.98 | 47.1 |
| GSMUA_Achr9P18170_001 | Banana | nucleus | 40.42 | 43.21 |
| GSMUA_Achr1P20040_001 | Banana | nucleus | 36.25 | 42.33 |
| GSMUA_Achr9P08310_001 | Banana | vacuole | 22.45 | 42.09 |
| GSMUA_Achr8P13620_001 | Banana | nucleus | 21.8 | 41.12 |
| GSMUA_Achr9P14090_001 | Banana | nucleus | 40.42 | 40.55 |
| GSMUA_Achr3P05460_001 | Banana | nucleus | 42.61 | 39.98 |
| GSMUA_Achr6P36980_001 | Banana | nucleus | 35.93 | 38.23 |
| GSMUA_Achr10P... | Banana | nucleus | 27.6 | 37.39 |
| GSMUA_Achr5P05010_001 | Banana | nucleus | 35.16 | 36.85 |
| GSMUA_Achr8P23850_001 | Banana | nucleus | 43.04 | 36.83 |
| GSMUA_Achr6P07390_001 | Banana | nucleus | 26.18 | 36.49 |
| GSMUA_Achr6P12780_001 | Banana | nucleus | 27.38 | 35.92 |
| GSMUA_AchrUn_... | Banana | nucleus | 24.97 | 35.91 |
| GSMUA_Achr6P29070_001 | Banana | nucleus, vacuole | 27.16 | 35.58 |
| GSMUA_Achr6P01740_001 | Banana | nucleus | 40.42 | 35.51 |
| GSMUA_Achr2P19760_001 | Banana | nucleus | 25.52 | 34.88 |
| GSMUA_Achr10P... | Banana | nucleus | 25.08 | 34.33 |
| GSMUA_Achr7P24330_001 | Banana | nucleus | 24.53 | 33.63 |
| GSMUA_Achr6P08090_001 | Banana | nucleus | 30.12 | 33.37 |
| GSMUA_Achr10P... | Banana | nucleus | 29.79 | 33.01 |
| GSMUA_Achr1P20000_001 | Banana | nucleus | 34.61 | 32.54 |
| GSMUA_Achr6P16450_001 | Banana | nucleus | 30.01 | 31.39 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.57 | 30.54 |
| GSMUA_Achr1P20010_001 | Banana | plasma membrane, plastid | 33.08 | 28.76 |
Protein Annotations
| MapMan:15.5.5.1 | Gene3D:2.30.30.1040 | Gene3D:2.40.330.10 | Gene3D:3.10.20.90 | InterPro:AUX/IAA_dom | InterPro:Auxin_resp |
| InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009725 | GO:GO:0009734 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr11G25770_001 |
| EnsemblPlants:GSMUA_Achr11P25770_001 | EnsemblPlants:GSMUA_Achr11T25770_001 | InterPro:IPR000270 | InterPro:IPR003340 | InterPro:IPR015300 | UniProt:M0RVF7 |
| InterPro:PB1_dom | PFAM:PF02309 | PFAM:PF02362 | PFAM:PF06507 | PFscan:PS50863 | PFscan:PS51745 |
| PANTHER:PTHR31384 | PANTHER:PTHR31384:SF68 | SMART:SM01019 | SUPFAM:SSF101936 | SUPFAM:SSF54277 | UniParc:UPI0002967271 |
| SEG:seg | : | : | : | : | : |
Description
Auxin response factor 6 [Source:GMGC_GENE;Acc:GSMUA_Achr11G25770_001]
Coordinates
chr11:-:24797202..24804050
Molecular Weight (calculated)
101635.0 Da
IEP (calculated)
6.346
GRAVY (calculated)
-0.453
Length
913 amino acids
Sequence
(BLAST)
(BLAST)
001: MRLSSGGLGN QQNEEAEEQV CLNSELWHAC AGPLVSLPSV GSRVVYFPQG HSEQVAASTN KEFDSLPSYP SLPPQLVCQL HNVTMHADVE TDEVYGQMTL
101: QPLSPQEQKD PYLITEMGTP CKQPTNYFCK TLTASDTSTH GGFSVPRRAA EKVFPPLDFS QQPPAQELIA KDLHGNEWKF RHIFRGQPKR HLLTTGWSVF
201: VSAKRLVAGD SVLFIWNDNN QLLLGIRRAN RPQTVMPSSV LSSDSMHIGL LAAAAHAAAT NSRFTIFYNP RASPSEFVIP LAKYVKAVHH TRVSVGMRFR
301: MLFETEESSV RRYMGTITGI SDLDPVRWPN SHWRSVKVGW DESTAGQRQP RVSLWEIEPL TTFPMYPSPF PFRLKRPWPT GLPSLYGGKD DISLNSPLLW
401: LQNGGNTGLQ SLNFQGIGVT PWTQPNFDTP ILGLQPGMYQ AMAAAGLQET RTTETTKLIS PSVLPFQQTQ NITTRTSPML PSQVLEHGQS QPPQTFLQDI
501: QINQVQSQSQ AEFLQHQLRQ EYSFGEQQHQ QEISQQQLPQ QKQTLHHQQI QQQKFLSTQQ VCTGMSALPE LISESQSPST ALQNILSFSQ SQNFSNSNGN
601: FVRTSNASSL HDILHQLSPE DASNLHSWSR GNQVFTSSPW PSKRVAIESM LPSGDQCVLP RVEQSGVSQP NIAQRSVTLP PFPGRECMVD QDGNVDGQNH
701: LLFGVNIDSS PLLVQNGMAN LSNIRNETDS MNIRYAASNF VASSGNDFAL NQTLTGSNSL EEAGFLHSPE NVDSLNPKSR TSVKVYKSGS LGRSLDIAKF
801: SSYHELRSEL GHLFGLEGQL EDPLRSGWQL VFVDRENDIL LVGDDPWQEF VNSVWCIKIL SPQEVQQMGK QSVEFLNSTC IKRLPNNSCD DYINRQDSRT
901: VSTGIASVGT LEY
101: QPLSPQEQKD PYLITEMGTP CKQPTNYFCK TLTASDTSTH GGFSVPRRAA EKVFPPLDFS QQPPAQELIA KDLHGNEWKF RHIFRGQPKR HLLTTGWSVF
201: VSAKRLVAGD SVLFIWNDNN QLLLGIRRAN RPQTVMPSSV LSSDSMHIGL LAAAAHAAAT NSRFTIFYNP RASPSEFVIP LAKYVKAVHH TRVSVGMRFR
301: MLFETEESSV RRYMGTITGI SDLDPVRWPN SHWRSVKVGW DESTAGQRQP RVSLWEIEPL TTFPMYPSPF PFRLKRPWPT GLPSLYGGKD DISLNSPLLW
401: LQNGGNTGLQ SLNFQGIGVT PWTQPNFDTP ILGLQPGMYQ AMAAAGLQET RTTETTKLIS PSVLPFQQTQ NITTRTSPML PSQVLEHGQS QPPQTFLQDI
501: QINQVQSQSQ AEFLQHQLRQ EYSFGEQQHQ QEISQQQLPQ QKQTLHHQQI QQQKFLSTQQ VCTGMSALPE LISESQSPST ALQNILSFSQ SQNFSNSNGN
601: FVRTSNASSL HDILHQLSPE DASNLHSWSR GNQVFTSSPW PSKRVAIESM LPSGDQCVLP RVEQSGVSQP NIAQRSVTLP PFPGRECMVD QDGNVDGQNH
701: LLFGVNIDSS PLLVQNGMAN LSNIRNETDS MNIRYAASNF VASSGNDFAL NQTLTGSNSL EEAGFLHSPE NVDSLNPKSR TSVKVYKSGS LGRSLDIAKF
801: SSYHELRSEL GHLFGLEGQL EDPLRSGWQL VFVDRENDIL LVGDDPWQEF VNSVWCIKIL SPQEVQQMGK QSVEFLNSTC IKRLPNNSCD DYINRQDSRT
901: VSTGIASVGT LEY
001: MRLSSAGFNP QPHEVTGEKR VLNSELWHAC AGPLVSLPPV GSRVVYFPQG HSEQVAASTN KEVDAHIPNY PSLHPQLICQ LHNVTMHADV ETDEVYAQMT
101: LQPLNAQEQK DPYLPAELGV PSRQPTNYFC KTLTASDTST HGGFSVPRRA AEKVFPPLDY SQQPPAQELM ARDLHDNEWK FRHIFRGQPK RHLLTTGWSV
201: FVSAKRLVAG DSVLFIWNDK NQLLLGIRRA NRPQTVMPSS VLSSDSMHLG LLAAAAHAAA TNSRFTIFYN PRASPSEFVI PLAKYVKAVY HTRVSVGMRF
301: RMLFETEESS VRRYMGTITG ICDLDPTRWA NSHWRSVKVG WDESTAGERQ PRVSLWEIEP LTTFPMYPSP FPLRLKRPWP PGLPSFHGLK EDDMGMSMSS
401: PLMWDRGLQS LNFQGMGVNP WMQPRLDTSG LLGMQNDVYQ AMAAAALQDM RGIDPAKAAA SLLQFQNSPG FSMQSPSLVQ PQMLQQQLSQ QQQQLSQQQQ
501: QQQQLSQQQQ QQLSQQQQQQ LSQQQQQQLS QQQQQQAYLG VPETHQPQSQ AQSQSNNHLS QQQQQVVDNH NPSASSAAVV SAMSQFGSAS QPNTSPLQSM
601: TSLCHQQSFS DTNGGNNPIS PLHTLLSNFS QDESSQLLHL TRTNSAMTSS GWPSKRPAVD SSFQHSGAGN NNTQSVLEQL GQSHTSNVPP NAVSLPPFPG
701: GRECSIEQEG SASDPHSHLL FGVNIDSSSL LMPNGMSNLR SIGIEGGDST TLPFTSSNFN NDFSGNLAMT TPSSCIDESG FLQSSENLGS ENPQSNTFVK
801: VYKSGSFGRS LDISKFSSYH ELRSELARMF GLEGQLEDPV RSGWQLVFVD RENDVLLLGD DPWPEFVSSV WCIKILSPQE VQQMGKRGLE LLNSAPSSNN
901: VDKLPSNGNC DDFGNRSDPR NLGNGIASVG GSFNY
101: LQPLNAQEQK DPYLPAELGV PSRQPTNYFC KTLTASDTST HGGFSVPRRA AEKVFPPLDY SQQPPAQELM ARDLHDNEWK FRHIFRGQPK RHLLTTGWSV
201: FVSAKRLVAG DSVLFIWNDK NQLLLGIRRA NRPQTVMPSS VLSSDSMHLG LLAAAAHAAA TNSRFTIFYN PRASPSEFVI PLAKYVKAVY HTRVSVGMRF
301: RMLFETEESS VRRYMGTITG ICDLDPTRWA NSHWRSVKVG WDESTAGERQ PRVSLWEIEP LTTFPMYPSP FPLRLKRPWP PGLPSFHGLK EDDMGMSMSS
401: PLMWDRGLQS LNFQGMGVNP WMQPRLDTSG LLGMQNDVYQ AMAAAALQDM RGIDPAKAAA SLLQFQNSPG FSMQSPSLVQ PQMLQQQLSQ QQQQLSQQQQ
501: QQQQLSQQQQ QQLSQQQQQQ LSQQQQQQLS QQQQQQAYLG VPETHQPQSQ AQSQSNNHLS QQQQQVVDNH NPSASSAAVV SAMSQFGSAS QPNTSPLQSM
601: TSLCHQQSFS DTNGGNNPIS PLHTLLSNFS QDESSQLLHL TRTNSAMTSS GWPSKRPAVD SSFQHSGAGN NNTQSVLEQL GQSHTSNVPP NAVSLPPFPG
701: GRECSIEQEG SASDPHSHLL FGVNIDSSSL LMPNGMSNLR SIGIEGGDST TLPFTSSNFN NDFSGNLAMT TPSSCIDESG FLQSSENLGS ENPQSNTFVK
801: VYKSGSFGRS LDISKFSSYH ELRSELARMF GLEGQLEDPV RSGWQLVFVD RENDVLLLGD DPWPEFVSSV WCIKILSPQE VQQMGKRGLE LLNSAPSSNN
901: VDKLPSNGNC DDFGNRSDPR NLGNGIASVG GSFNY
Arabidopsis Description
ARF6Auxin response factor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZTX8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.