Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P08090_001 | Banana | nucleus | 74.77 | 80.22 |
| Os11t0523800-01 | Rice | nucleus | 30.54 | 73.77 |
| GSMUA_Achr10P... | Banana | nucleus | 68.1 | 73.06 |
| GSMUA_Achr6P16450_001 | Banana | nucleus | 69.0 | 69.87 |
| VIT_17s0000g00320.t01 | Wine grape | nucleus | 58.94 | 60.44 |
| VIT_01s0244g00150.t01 | Wine grape | nucleus | 50.34 | 57.87 |
| KRH41062 | Soybean | nucleus | 55.43 | 57.58 |
| KRH59742 | Soybean | nucleus | 55.54 | 57.23 |
| OQU83539 | Sorghum | nucleus | 52.71 | 57.18 |
| Os12t0479400-02 | Rice | nucleus | 54.3 | 57.07 |
| PGSC0003DMT400037454 | Potato | nucleus | 53.28 | 56.82 |
| Solyc12g042070.1.1 | Tomato | nucleus | 53.17 | 56.76 |
| KRH63855 | Soybean | nucleus | 54.07 | 56.7 |
| KRH54110 | Soybean | nucleus | 53.96 | 56.58 |
| PGSC0003DMT400036765 | Potato | nucleus | 53.96 | 56.45 |
| Solyc03g118290.2.1 | Tomato | nucleus | 53.51 | 55.91 |
| AT5G62000.1 | Thale cress | nucleus | 53.51 | 55.06 |
| CDY67247 | Canola | nucleus | 52.71 | 54.76 |
| CDX86939 | Canola | nucleus | 52.6 | 54.71 |
| GSMUA_Achr9P08310_001 | Banana | vacuole | 29.98 | 54.41 |
| Bra010048.1-P | Field mustard | nucleus | 52.38 | 54.41 |
| CDY00245 | Canola | nucleus | 52.38 | 54.41 |
| CDX87230 | Canola | nucleus | 50.91 | 54.35 |
| EES17013 | Sorghum | nucleus | 51.36 | 54.11 |
| Zm00001d023659_P007 | Maize | nucleus | 50.34 | 53.87 |
| Zm00001d049295_P001 | Maize | nucleus | 52.49 | 52.97 |
| Zm00001d041056_P019 | Maize | nucleus | 50.34 | 52.73 |
| GSMUA_Achr8P13630_001 | Banana | cytosol, nucleus, plastid | 17.65 | 52.17 |
| CDY16798 | Canola | nucleus | 51.02 | 51.43 |
| Bra035910.1-P | Field mustard | nucleus | 51.58 | 51.35 |
| GSMUA_Achr10P... | Banana | nucleus | 37.9 | 49.7 |
| GSMUA_AchrUn_... | Banana | nucleus | 35.63 | 49.61 |
| GSMUA_Achr10P... | Banana | nucleus | 36.31 | 48.13 |
| GSMUA_Achr6P07390_001 | Banana | nucleus | 35.63 | 48.09 |
| GSMUA_Achr7P24330_001 | Banana | nucleus | 35.86 | 47.6 |
| GSMUA_Achr6P12780_001 | Banana | nucleus | 37.44 | 47.56 |
| GSMUA_Achr2P19760_001 | Banana | nucleus | 35.86 | 47.46 |
| GSMUA_Achr6P29070_001 | Banana | nucleus, vacuole | 36.2 | 45.91 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 20.7 | 35.81 |
| GSMUA_Achr5P26580_001 | Banana | nucleus | 29.64 | 32.47 |
| GSMUA_Achr3P23290_001 | Banana | nucleus | 29.75 | 32.07 |
| GSMUA_Achr5P02450_001 | Banana | nucleus | 29.75 | 31.76 |
| GSMUA_Achr3P10240_001 | Banana | nucleus | 21.95 | 31.29 |
| GSMUA_Achr6P19850_001 | Banana | nucleus | 30.2 | 31.23 |
| GSMUA_Achr1P08230_001 | Banana | mitochondrion | 23.42 | 31.17 |
| GSMUA_Achr4P25960_001 | Banana | nucleus | 28.05 | 30.96 |
| GSMUA_Achr1P20040_001 | Banana | nucleus | 27.38 | 30.95 |
| GSMUA_Achr11P... | Banana | nucleus | 28.96 | 30.88 |
| GSMUA_Achr11P... | Banana | nucleus | 27.71 | 30.25 |
| GSMUA_Achr11P... | Banana | nucleus | 30.54 | 29.57 |
| GSMUA_Achr5P00590_001 | Banana | nucleus | 30.09 | 29.26 |
| GSMUA_Achr9P14090_001 | Banana | nucleus | 29.64 | 28.79 |
| GSMUA_Achr6P36980_001 | Banana | nucleus | 27.38 | 28.21 |
| GSMUA_Achr9P18170_001 | Banana | nucleus | 27.04 | 27.99 |
| GSMUA_Achr3P05460_001 | Banana | nucleus | 29.86 | 27.13 |
| GSMUA_Achr6P01740_001 | Banana | nucleus | 30.43 | 25.89 |
| GSMUA_Achr8P23850_001 | Banana | nucleus | 30.2 | 25.02 |
| GSMUA_Achr1P20000_001 | Banana | nucleus | 27.26 | 24.82 |
| GSMUA_Achr5P05010_001 | Banana | nucleus | 23.76 | 24.11 |
| GSMUA_Achr1P20010_001 | Banana | plasma membrane, plastid | 25.79 | 21.71 |
| GSMUA_Achr8P13620_001 | Banana | nucleus | 11.43 | 20.87 |
Protein Annotations
| MapMan:15.5.5.1 | Gene3D:2.30.30.1040 | Gene3D:2.40.330.10 | Gene3D:3.10.20.90 | InterPro:AUX/IAA_dom | InterPro:Auxin_resp |
| InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009725 | GO:GO:0009734 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_AchrUn_randomG14770_001 |
| EnsemblPlants:GSMUA_AchrUn_randomP14770_001 | EnsemblPlants:GSMUA_AchrUn_randomT14770_001 | InterPro:IPR000270 | InterPro:IPR003340 | InterPro:IPR015300 | UniProt:M0U986 |
| InterPro:PB1_dom | PFAM:PF02309 | PFAM:PF02362 | PFAM:PF06507 | PFscan:PS50863 | PFscan:PS51745 |
| PANTHER:PTHR31384 | PANTHER:PTHR31384:SF40 | SMART:SM01019 | SUPFAM:SSF101936 | SUPFAM:SSF54277 | UniParc:UPI000295FE68 |
| SEG:seg | : | : | : | : | : |
Description
Auxin response factor 24 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG14770_001]
Coordinates
chrchrUn_random:+:69567586..69573059
Molecular Weight (calculated)
99065.9 Da
IEP (calculated)
7.129
GRAVY (calculated)
-0.619
Length
884 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSEVSVKG SRGRGEGLSS GCSEPREAAP MRDDDEERSL GLSGGAAVRK DSEDALYTEL WHACAGPLVT IPRMGEKVFY FPQGHVEQVE ASTNQVADQQ
101: MPVYNLPWKI LCRVMNVDLK AEPDTDEVYA QITLLPDPKQ DENTVEKETL APPPPRPHVY SFCKTLTASD TSTHGGFSVL RRHADECLPP LDMSQQPPSQ
201: ELVAKDLHGV EWHFRHIFRG QPRRHLLQSG WSVFVSSKRL VARDAFIFLR GENSELRVGV RRALRQQTNV PSSVISSHSM HLGVLATAWH AVNTGTMFTV
301: YYKPRMCPTE FIVPFDHVDS IKSNHSIGMR FKMRFEGEET PEQRFTGTIV GIGDADPSRW TGSKWRCLKV RWDEASLIPR PERVSPWKIE PVLTPPPNPG
401: PMPRPKRPRT SNVPSSPDSS VLTKEAASKA GPCQSHEVSR VLQGQDMMAF RSTFADSNES DTTQKPLMWS VCDEKINDVS ALRRSVSERW MHTKMHEQTY
501: TDILSGFQPG DSSGFHSPGD KNLLKSHFQD QGAKHNCSPG SRSLMPPNSN FSIGECNLKM TRVVELSYQK LGSYRYDMQG VHTELQELGG DRHSENWLPR
601: FLQDSRTENM PQTRVVKPQP LAPSQNDVVK SKGNSGCKLF GFHLNSKPVT SVSTTLTNGD TEKPNQVCQQ APKDVQNKLQ GGSTRSCTKA SFLFLLNQFE
701: TYSFYVLFVS DIKCRFSCQY KIRSINADNI DRPKEVHKQG IALGRSVDLS KFSGYDELIA ELDQIFDFKG ALLAPNKNWL VVYTDNEGDM MLVGDDPWNE
801: FCNMVRKIYI YTREEVQSMN PGTLNSRLEE SPATSEENSS GKKTNSPVHG TNRENSEGCA ELSRSLEDVK PKKLDVAFCD GSNI
101: MPVYNLPWKI LCRVMNVDLK AEPDTDEVYA QITLLPDPKQ DENTVEKETL APPPPRPHVY SFCKTLTASD TSTHGGFSVL RRHADECLPP LDMSQQPPSQ
201: ELVAKDLHGV EWHFRHIFRG QPRRHLLQSG WSVFVSSKRL VARDAFIFLR GENSELRVGV RRALRQQTNV PSSVISSHSM HLGVLATAWH AVNTGTMFTV
301: YYKPRMCPTE FIVPFDHVDS IKSNHSIGMR FKMRFEGEET PEQRFTGTIV GIGDADPSRW TGSKWRCLKV RWDEASLIPR PERVSPWKIE PVLTPPPNPG
401: PMPRPKRPRT SNVPSSPDSS VLTKEAASKA GPCQSHEVSR VLQGQDMMAF RSTFADSNES DTTQKPLMWS VCDEKINDVS ALRRSVSERW MHTKMHEQTY
501: TDILSGFQPG DSSGFHSPGD KNLLKSHFQD QGAKHNCSPG SRSLMPPNSN FSIGECNLKM TRVVELSYQK LGSYRYDMQG VHTELQELGG DRHSENWLPR
601: FLQDSRTENM PQTRVVKPQP LAPSQNDVVK SKGNSGCKLF GFHLNSKPVT SVSTTLTNGD TEKPNQVCQQ APKDVQNKLQ GGSTRSCTKA SFLFLLNQFE
701: TYSFYVLFVS DIKCRFSCQY KIRSINADNI DRPKEVHKQG IALGRSVDLS KFSGYDELIA ELDQIFDFKG ALLAPNKNWL VVYTDNEGDM MLVGDDPWNE
801: FCNMVRKIYI YTREEVQSMN PGTLNSRLEE SPATSEENSS GKKTNSPVHG TNRENSEGCA ELSRSLEDVK PKKLDVAFCD GSNI
001: MASSEVSMKG NRGGDNFSSS GFSDPKETRN VSVAGEGQKS NSTRSAAAER ALDPEAALYR ELWHACAGPL VTVPRQDDRV FYFPQGHIEQ VEASTNQAAE
101: QQMPLYDLPS KLLCRVINVD LKAEADTDEV YAQITLLPEA NQDENAIEKE APLPPPPRFQ VHSFCKTLTA SDTSTHGGFS VLRRHADECL PPLDMSRQPP
201: TQELVAKDLH ANEWRFRHIF RGQPRRHLLQ SGWSVFVSSK RLVAGDAFIF LRGENGELRV GVRRAMRQQG NVPSSVISSH SMHLGVLATA WHAISTGTMF
301: TVYYKPRTSP SEFIVPFDQY MESVKNNYSI GMRFKMRFEG EEAPEQRFTG TIVGIEESDP TRWPKSKWRS LKVRWDETSS IPRPDRVSPW KVEPALAPPA
401: LSPVPMPRPK RPRSNIAPSS PDSSMLTREG TTKANMDPLP ASGLSRVLQG QEYSTLRTKH TESVECDAPE NSVVWQSSAD DDKVDVVSGS RRYGSENWMS
501: SARHEPTYTD LLSGFGTNID PSHGQRIPFY DHSSSPSMPA KRILSDSEGK FDYLANQWQM IHSGLSLKLH ESPKVPAATD ASLQGRCNVK YSEYPVLNGL
601: STENAGGNWP IRPRALNYYE EVVNAQAQAQ AREQVTKQPF TIQEETAKSR EGNCRLFGIP LTNNMNGTDS TMSQRNNLND AAGLTQIASP KVQDLSDQSK
701: GSKSTNDHRE QGRPFQTNNP HPKDAQTKTN SSRSCTKVHK QGIALGRSVD LSKFQNYEEL VAELDRLFEF NGELMAPKKD WLIVYTDEEN DMMLVGDDPW
801: QEFCCMVRKI FIYTKEEVRK MNPGTLSCRS EEEAVVGEGS DAKDAKSASN PSLSSAGNS
101: QQMPLYDLPS KLLCRVINVD LKAEADTDEV YAQITLLPEA NQDENAIEKE APLPPPPRFQ VHSFCKTLTA SDTSTHGGFS VLRRHADECL PPLDMSRQPP
201: TQELVAKDLH ANEWRFRHIF RGQPRRHLLQ SGWSVFVSSK RLVAGDAFIF LRGENGELRV GVRRAMRQQG NVPSSVISSH SMHLGVLATA WHAISTGTMF
301: TVYYKPRTSP SEFIVPFDQY MESVKNNYSI GMRFKMRFEG EEAPEQRFTG TIVGIEESDP TRWPKSKWRS LKVRWDETSS IPRPDRVSPW KVEPALAPPA
401: LSPVPMPRPK RPRSNIAPSS PDSSMLTREG TTKANMDPLP ASGLSRVLQG QEYSTLRTKH TESVECDAPE NSVVWQSSAD DDKVDVVSGS RRYGSENWMS
501: SARHEPTYTD LLSGFGTNID PSHGQRIPFY DHSSSPSMPA KRILSDSEGK FDYLANQWQM IHSGLSLKLH ESPKVPAATD ASLQGRCNVK YSEYPVLNGL
601: STENAGGNWP IRPRALNYYE EVVNAQAQAQ AREQVTKQPF TIQEETAKSR EGNCRLFGIP LTNNMNGTDS TMSQRNNLND AAGLTQIASP KVQDLSDQSK
701: GSKSTNDHRE QGRPFQTNNP HPKDAQTKTN SSRSCTKVHK QGIALGRSVD LSKFQNYEEL VAELDRLFEF NGELMAPKKD WLIVYTDEEN DMMLVGDDPW
801: QEFCCMVRKI FIYTKEEVRK MNPGTLSCRS EEEAVVGEGS DAKDAKSASN PSLSSAGNS
Arabidopsis Description
ARF2Auxin response factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94JM3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.