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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:nucleus
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr1P09750_001
GSMUA_Achr1P26140_001
GSMUA_Achr2P09210_001
GSMUA_Achr2P12630_001
GSMUA_Achr2P15340_001
GSMUA_Achr2P19760_001
GSMUA_Achr3P03400_001
GSMUA_Achr3P10240_001
GSMUA_Achr3P13070_001
GSMUA_Achr3P16300_001
GSMUA_Achr3P28230_001
GSMUA_Achr4P05200_001
GSMUA_Achr4P09450_001
GSMUA_Achr4P12950_001
GSMUA_Achr4P20150_001
GSMUA_Achr4P21020_001
GSMUA_Achr4P21030_001
GSMUA_Achr4P22520_001
GSMUA_Achr4P22530_001
GSMUA_Achr5P03110_001
GSMUA_Achr5P09310_001
GSMUA_Achr6P03870_001
GSMUA_Achr6P26730_001
GSMUA_Achr7P10930_001
GSMUA_Achr7P13680_001
GSMUA_Achr7P16390_001
GSMUA_Achr7P24330_001
GSMUA_Achr8P20610_001
GSMUA_Achr8P20620_001
GSMUA_Achr8P25220_001
GSMUA_Achr8P29850_001
GSMUA_Achr9P06290_001
GSMUA_Achr9P10690_001
GSMUA_Achr9P10700_001
GSMUA_Achr9P16800_001
GSMUA_Achr9P18170_001
GSMUA_Achr9P22600_001
GSMUA_Achr9P24330_001
GSMUA_Achr9P25550_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G19220.1 GSMUA_Achr10P... AT1G04250.1 21734647
AT1G19220.1 GSMUA_Achr4P21020_001 AT1G04250.1 21734647
AT1G19220.1 GSMUA_Achr4P22520_001 AT1G04250.1 21734647
AT1G19220.1 GSMUA_Achr8P20610_001 AT1G04250.1 21734647
AT1G19220.1 GSMUA_Achr9P10700_001 AT1G04250.1 21734647
AT1G19220.1 GSMUA_Achr9P25550_001 AT1G04250.1 21734647
AT1G19220.1 GSMUA_Achr10P... AT1G35240.1 21734647
AT1G19220.1 GSMUA_Achr2P19760_001 AT1G35240.1 21734647
AT1G19220.1 GSMUA_Achr7P24330_001 AT1G35240.1 21734647
AT1G19220.1 GSMUA_AchrUn_... AT1G35240.1 21734647
AT1G19220.1 GSMUA_Achr3P16300_001 AT1G51950.1 18505759
AT1G19220.1 GSMUA_Achr5P09310_001 AT1G51950.1 18505759
AT1G19220.1 GSMUA_Achr7P13680_001 AT1G51950.1 18505759
AT1G19220.1 GSMUA_AchrUn_... AT1G51950.1 18505759
AT1G19220.1 GSMUA_Achr8P29850_001 AT2G46990.1 21734647
AT1G19220.1 GSMUA_Achr9P16800_001 AT2G46990.1 21734647
AT1G19220.1 GSMUA_Achr10P... AT3G04730.1 21734647
AT1G19220.1 GSMUA_Achr4P21020_001 AT3G04730.1 21734647
AT1G19220.1 GSMUA_Achr4P22520_001 AT3G04730.1 21734647
AT1G19220.1 GSMUA_Achr8P20610_001 AT3G04730.1 21734647
AT1G19220.1 GSMUA_Achr9P10700_001 AT3G04730.1 21734647
AT1G19220.1 GSMUA_Achr9P25550_001 AT3G04730.1 21734647
AT1G19220.1 GSMUA_Achr10P... AT3G23050.1 21734647
AT1G19220.1 GSMUA_Achr4P21020_001 AT3G23050.1 21734647
AT1G19220.1 GSMUA_Achr4P22520_001 AT3G23050.1 21734647
AT1G19220.1 GSMUA_Achr8P20610_001 AT3G23050.1 21734647
AT1G19220.1 GSMUA_Achr9P10700_001 AT3G23050.1 21734647
AT1G19220.1 GSMUA_Achr9P25550_001 AT3G23050.1 21734647
AT1G19220.1 GSMUA_Achr11P... AT4G14560.1 21734647
AT1G19220.1 GSMUA_Achr2P12630_001 AT4G14560.1 21734647
AT1G19220.1 GSMUA_Achr4P05200_001 AT4G14560.1 21734647
AT1G19220.1 GSMUA_Achr4P21030_001 AT4G14560.1 21734647
AT1G19220.1 GSMUA_Achr4P22530_001 AT4G14560.1 21734647
AT1G19220.1 GSMUA_Achr5P03110_001 AT4G14560.1 21734647
AT1G19220.1 GSMUA_Achr8P20620_001 AT4G14560.1 21734647
AT1G19220.1 GSMUA_Achr9P10690_001 AT4G14560.1 21734647
AT1G19220.1 GSMUA_Achr9P24330_001 AT4G14560.1 21734647
AT1G19220.1 GSMUA_Achr11P... AT4G14560.1 9342315
AT1G19220.1 GSMUA_Achr2P12630_001 AT4G14560.1 9342315
AT1G19220.1 GSMUA_Achr4P05200_001 AT4G14560.1 9342315
AT1G19220.1 GSMUA_Achr4P21030_001 AT4G14560.1 9342315
AT1G19220.1 GSMUA_Achr4P22530_001 AT4G14560.1 9342315
AT1G19220.1 GSMUA_Achr5P03110_001 AT4G14560.1 9342315
AT1G19220.1 GSMUA_Achr8P20620_001 AT4G14560.1 9342315
AT1G19220.1 GSMUA_Achr9P10690_001 AT4G14560.1 9342315
AT1G19220.1 GSMUA_Achr9P24330_001 AT4G14560.1 9342315
AT1G19220.1 GSMUA_Achr10P... AT5G57420.1 21734647
AT1G19220.1 GSMUA_Achr6P03870_001 AT5G57420.1 21734647
AT1G19220.1 GSMUA_Achr7P16390_001 AT5G57420.1 21734647
AT5G20730.1 GSMUA_Achr10P... AT1G04250.1 21734647
AT5G20730.1 GSMUA_Achr4P21020_001 AT1G04250.1 21734647
AT5G20730.1 GSMUA_Achr4P22520_001 AT1G04250.1 21734647
AT5G20730.1 GSMUA_Achr8P20610_001 AT1G04250.1 21734647
AT5G20730.1 GSMUA_Achr9P10700_001 AT1G04250.1 21734647
AT5G20730.1 GSMUA_Achr9P25550_001 AT1G04250.1 21734647
AT5G20730.1 GSMUA_Achr3P16300_001 AT1G51950.1 18505759
AT5G20730.1 GSMUA_Achr5P09310_001 AT1G51950.1 18505759
AT5G20730.1 GSMUA_Achr7P13680_001 AT1G51950.1 18505759
AT5G20730.1 GSMUA_AchrUn_... AT1G51950.1 18505759
AT5G20730.1 GSMUA_Achr10P... AT3G23050.1 21734647
AT5G20730.1 GSMUA_Achr4P21020_001 AT3G23050.1 21734647
AT5G20730.1 GSMUA_Achr4P22520_001 AT3G23050.1 21734647
AT5G20730.1 GSMUA_Achr8P20610_001 AT3G23050.1 21734647
AT5G20730.1 GSMUA_Achr9P10700_001 AT3G23050.1 21734647
AT5G20730.1 GSMUA_Achr9P25550_001 AT3G23050.1 21734647
AT5G20730.1 GSMUA_Achr1P09750_001 AT3G50060.1 17675404
AT5G20730.1 GSMUA_Achr1P26140_001 AT3G50060.1 17675404
AT5G20730.1 GSMUA_Achr3P13070_001 AT3G50060.1 17675404
AT5G20730.1 GSMUA_Achr3P28230_001 AT3G50060.1 17675404
AT5G20730.1 GSMUA_Achr4P09450_001 AT3G50060.1 17675404
AT5G20730.1 GSMUA_Achr4P12950_001 AT3G50060.1 17675404
AT5G20730.1 GSMUA_Achr4P20150_001 AT3G50060.1 17675404
AT5G20730.1 GSMUA_Achr8P25220_001 AT3G50060.1 17675404
AT5G20730.1 GSMUA_Achr9P22600_001 AT3G50060.1 17675404
AT5G20730.1 GSMUA_AchrUn_... AT3G50060.1 17675404
AT5G20730.1 GSMUA_Achr11P... AT4G14560.1 14729917
AT5G20730.1 GSMUA_Achr2P12630_001 AT4G14560.1 14729917
AT5G20730.1 GSMUA_Achr4P05200_001 AT4G14560.1 14729917
AT5G20730.1 GSMUA_Achr4P21030_001 AT4G14560.1 14729917
AT5G20730.1 GSMUA_Achr4P22530_001 AT4G14560.1 14729917
AT5G20730.1 GSMUA_Achr5P03110_001 AT4G14560.1 14729917
AT5G20730.1 GSMUA_Achr8P20620_001 AT4G14560.1 14729917
AT5G20730.1 GSMUA_Achr9P10690_001 AT4G14560.1 14729917
AT5G20730.1 GSMUA_Achr9P24330_001 AT4G14560.1 14729917
AT5G20730.1 GSMUA_Achr11P... AT4G14560.1 21734647
AT5G20730.1 GSMUA_Achr2P12630_001 AT4G14560.1 21734647
AT5G20730.1 GSMUA_Achr4P05200_001 AT4G14560.1 21734647
AT5G20730.1 GSMUA_Achr4P21030_001 AT4G14560.1 21734647
AT5G20730.1 GSMUA_Achr4P22530_001 AT4G14560.1 21734647
AT5G20730.1 GSMUA_Achr5P03110_001 AT4G14560.1 21734647
AT5G20730.1 GSMUA_Achr8P20620_001 AT4G14560.1 21734647
AT5G20730.1 GSMUA_Achr9P10690_001 AT4G14560.1 21734647
AT5G20730.1 GSMUA_Achr9P24330_001 AT4G14560.1 21734647
AT5G20730.1 GSMUA_Achr11P... AT4G14560.1 9342315
AT5G20730.1 GSMUA_Achr2P12630_001 AT4G14560.1 9342315
AT5G20730.1 GSMUA_Achr4P05200_001 AT4G14560.1 9342315
AT5G20730.1 GSMUA_Achr4P21030_001 AT4G14560.1 9342315
AT5G20730.1 GSMUA_Achr4P22530_001 AT4G14560.1 9342315
AT5G20730.1 GSMUA_Achr5P03110_001 AT4G14560.1 9342315
AT5G20730.1 GSMUA_Achr8P20620_001 AT4G14560.1 9342315
AT5G20730.1 GSMUA_Achr9P10690_001 AT4G14560.1 9342315
AT5G20730.1 GSMUA_Achr9P24330_001 AT4G14560.1 9342315
AT5G20730.1 GSMUA_Achr10P... AT4G29080.1 21734647
AT5G20730.1 GSMUA_Achr10P... AT4G29080.1 21734647
AT5G20730.1 GSMUA_Achr10P... AT4G29080.1 21734647
AT5G20730.1 GSMUA_Achr2P09210_001 AT4G29080.1 21734647
AT5G20730.1 GSMUA_Achr2P15340_001 AT4G29080.1 21734647
AT5G20730.1 GSMUA_Achr3P03400_001 AT4G29080.1 21734647
AT5G20730.1 GSMUA_Achr6P26730_001 AT4G29080.1 21734647
AT5G20730.1 GSMUA_Achr7P10930_001 AT4G29080.1 21734647
AT5G20730.1 GSMUA_Achr9P06290_001 AT4G29080.1 21734647
AT5G20730.1 GSMUA_Achr3P10240_001 AT5G20730.1 14729917
AT5G20730.1 GSMUA_Achr9P18170_001 AT5G20730.1 14729917
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr8P13630_001 Banana cytosol, nucleus, plastid 29.19 60.54
GSMUA_Achr9P18170_001 Banana nucleus 66.13 48.01
GSMUA_AchrUn_... Banana mitochondrion 38.23 46.38
GSMUA_Achr9P08310_001 Banana vacuole 29.35 37.37
GSMUA_Achr9P14090_001 Banana nucleus 53.55 36.48
GSMUA_Achr1P08230_001 Banana mitochondrion 39.03 36.45
Os06t0196700-02 Rice nucleus 61.13 35.92
CDX96672 Canola nucleus 58.87 35.78
KXG19536 Sorghum nucleus 60.65 35.71
Zm00001d045026_P002 Maize nucleus 60.32 35.52
CDX83778 Canola nucleus 58.39 35.49
TraesCS7D01G161900.1 Wheat nucleus 60.48 35.21
Bra025720.1-P Field mustard nucleus 59.52 35.18
CDY26690 Canola nucleus 59.52 35.18
TraesCS7A01G160800.1 Wheat nucleus 60.32 35.08
Bra016517.1-P Field mustard nucleus 56.94 34.95
GSMUA_Achr5P26580_001 Banana nucleus 45.32 34.82
CDY41030 Canola nucleus 59.35 34.78
GSMUA_Achr3P23290_001 Banana nucleus 45.97 34.76
GSMUA_Achr3P05460_001 Banana nucleus 54.52 34.74
TraesCS7B01G065800.2 Wheat plastid 60.48 34.69
GSMUA_Achr11P... Banana nucleus 46.13 34.5
GSMUA_Achr5P02450_001 Banana nucleus 45.97 34.42
KRH12587 Soybean nucleus 62.26 34.4
KRH37536 Soybean nucleus 62.42 34.4
GSMUA_Achr4P25960_001 Banana nucleus 44.35 34.33
HORVU7Hr1G033820.5 Barley nucleus 58.87 34.24
GSMUA_Achr11P... Banana nucleus 44.68 34.2
AT1G19220.1 Thale cress nucleus 59.68 34.07
CDX92437 Canola nucleus 56.94 33.94
KRH19355 Soybean nucleus 61.29 33.6
VIT_11s0016g00640.t01 Wine grape nucleus 62.42 33.51
KRH02575 Soybean nucleus 61.13 33.36
Bra020125.1-P Field mustard nucleus 58.87 33.18
CDY16560 Canola nucleus 55.65 33.11
GSMUA_Achr6P19850_001 Banana nucleus 45.65 33.1
Solyc07g042260.2.1 Tomato nucleus 60.65 33.07
GSMUA_Achr1P20040_001 Banana nucleus 41.61 32.99
CDY45069 Canola nucleus 58.55 32.61
GSMUA_Achr5P00590_001 Banana nucleus 47.42 32.34
PGSC0003DMT400006151 Potato nucleus 60.16 32.24
GSMUA_Achr11P... Banana nucleus 47.1 31.98
GSMUA_Achr6P01740_001 Banana nucleus 52.9 31.57
AT5G20730.1 Thale cress nucleus 59.03 31.42
GSMUA_Achr8P23850_001 Banana nucleus 54.03 31.4
GSMUA_Achr5P05010_001 Banana nucleus 42.9 30.54
GSMUA_Achr6P36980_001 Banana nucleus 41.13 29.72
GSMUA_Achr10P... Banana nucleus 30.32 28.19
GSMUA_Achr10P... Banana nucleus 30.0 27.6
GSMUA_Achr2P19760_001 Banana nucleus 29.68 27.54
GSMUA_Achr6P07390_001 Banana nucleus 28.71 27.18
GSMUA_Achr6P12780_001 Banana nucleus 30.32 27.01
GSMUA_AchrUn_... Banana nucleus 27.26 26.61
GSMUA_Achr6P29070_001 Banana nucleus, vacuole 28.71 25.54
GSMUA_Achr1P20000_001 Banana nucleus 39.68 25.33
GSMUA_Achr7P24330_001 Banana nucleus 27.1 25.23
Bra002327.1-P Field mustard nucleus 57.74 24.88
GSMUA_Achr6P08090_001 Banana nucleus 30.97 23.3
GSMUA_Achr10P... Banana nucleus 30.81 23.18
GSMUA_Achr6P16450_001 Banana nucleus 31.77 22.57
GSMUA_AchrUn_... Banana nucleus 31.29 21.95
GSMUA_Achr1P20010_001 Banana plasma membrane, plastid 36.29 21.43
GSMUA_Achr8P13620_001 Banana nucleus 12.58 16.12
Protein Annotations
MapMan:15.5.5.1Gene3D:2.30.30.1040Gene3D:2.40.330.10InterPro:Auxin_respInterPro:B3_DNA-bdInterPro:DNA-bd_pseudobarrel_sf
GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0005488GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0007154
GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009719GO:GO:0009725
GO:GO:0009734GO:GO:0009987EnsemblPlantsGene:GSMUA_Achr3G10240_001EnsemblPlants:GSMUA_Achr3P10240_001EnsemblPlants:GSMUA_Achr3T10240_001InterPro:IPR003340
InterPro:IPR015300UniProt:M0SDE1PFAM:PF02362PFAM:PF06507PFscan:PS50863PANTHER:PTHR31384
PANTHER:PTHR31384:SF21SMART:SM01019SUPFAM:SSF101936UniParc:UPI000295FC89SEG:seg:
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G10240_001]
Coordinates
chr3:+:7413707..7421048
Molecular Weight (calculated)
69466.9 Da
IEP (calculated)
7.615
GRAVY (calculated)
-0.301
Length
620 amino acids
Sequence
(BLAST)
001: MDKILFIIHE NKYKTYKIIQ HVDHFYKSIP PWRVPHPLKP QGIIDSELWH ACAGPLVSLP PVGSLVVYFP QGHSEQVAAS MQKEINDIPK YPSLPSKLIC
101: VLLDVTMHAD AETDEVYAQM TLQPVNKYDR EAMLASEMGL KQNKHPAEFF CKTLTASDTS THGGFSVPRR AAEKIFPPLD FTMQPPAQEL VVKDLHDVSW
201: TFRHIFRGQP KRHLLTTGWS VFVGTKRLSA GDSVLFIRDE KLQLLFGMRR ANRQQPALSS SVLSSDSMHI GILAAAAHAA TNNSPFTIFC NPRASPSEFV
301: IPFAKYNKAM YTQVSLGMRF RMMFETEDSS VRRYMGTVTG ISDLDPVRWK NSQWHNLQVG WDESTATERR TRVSIWEIEP LATPFYLCPP PFFRRNFPEA
401: PGVPDAHEVE NAFQRVMPWL NDDYGIKDTQ SALFPGLSLV QWMSMQQNHQ LMTPAAQPAH FPSAIASALQ NGLLLPQASA SHHVQLPPLQ QKSINLQQQQ
501: FQQQEQGQLQ QPQSQPQPQQ LRPVAVQEAA DHQLMQHQTS SGQIVSQTHS SSQHLQPSLL QLQELQSSST IALSAQSIIA ISVAAASSST KSAVSRAAGF
601: TTAVFTQWDQ GSIFIELSFN
Best Arabidopsis Sequence Match ( AT1G19220.1 )
(BLAST)
0001: MKAPSNGFLP SSNEGEKKPI NSQLWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMQKQ TDFIPNYPNL PSKLICLLHS VTLHADTETD EVYAQMTLQP
0101: VNKYDREALL ASDMGLKLNR QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIVAKD LHDTTWTFRH IYRGQPKRHL LTTGWSVFVS
0201: TKRLFAGDSV LFVRDEKSQL MLGIRRANRQ TPTLSSSVIS SDSMHIGILA AAAHANANSS PFTIFFNPRA SPSEFVVPLA KYNKALYAQV SLGMRFRMMF
0301: ETEDCGVRRY MGTVTGISDL DPVRWKGSQW RNLQVGWDES TAGDRPSRVS IWEIEPVITP FYICPPPFFR PKYPRQPGMP DDELDMENAF KRAMPWMGED
0401: FGMKDAQSSM FPGLSLVQWM SMQQNNPLSG SATPQLPSAL SSFNLPNNFA SNDPSKLLNF QSPNLSSANS QFNKPNTVNH ISQQMQAQPA MVKSQQQQQQ
0501: QQQQHQHQQQ QLQQQQQLQM SQQQVQQQGI YNNGTIAVAN QVSCQSPNQP TGFSQSQLQQ QSMLPTGAKM THQNINSMGN KGLSQMTSFA QEMQFQQQLE
0601: MHNSSQLLRN QQEQSSLHSL QQNLSQNPQQ LQMQQQSSKP SPSQQLQLQL LQKLQQQQQQ QSIPPVSSSL QPQLSALQQT QSHQLQQLLS SQNQQPLAHG
0701: NNSFPASTFM QPPQIQVSPQ QQGQMSNKNL VAAGRSHSGH TDGEAPSCST SPSANNTGHD NVSPTNFLSR NQQQGQAASV SASDSVFERA SNPVQELYTK
0801: TESRISQGMM NMKSAGEHFR FKSAVTDQID VSTAGTTYCP DVVGPVQQQQ TFPLPSFGFD GDCQSHHPRN NLAFPGNLEA VTSDPLYSQK DFQNLVPNYG
0901: NTPRDIETEL SSAAISSQSF GIPSIPFKPG CSNEVGGIND SGIMNGGGLW PNQTQRMRTY TKVQKRGSVG RSIDVTRYSG YDELRHDLAR MFGIEGQLED
1001: PLTSDWKLVY TDHENDILLV GDDPWEEFVN CVQNIKILSS VEVQQMSLDG DLAAIPTTNQ ACSETDSGNA WKVHYEDTSA AASFNR
Arabidopsis Description
ARF19Auxin response factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q8RYC8]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.