Factsheet for GSMUA_Achr1P08230_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2
nucleus 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	nucleus
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g006350.1.1	Tomato	nucleus	20.48	73.12
GSMUA_Achr8P13630_001	Banana	cytosol, nucleus, plastid	26.51	58.86
Solyc07g043620.2.1	Tomato	nucleus	43.67	55.24
GSMUA_AchrUn_...	Banana	mitochondrion	35.69	46.38
GSMUA_Achr5P26580_001	Banana	nucleus	49.1	40.4
GSMUA_Achr3P23290_001	Banana	nucleus	49.55	40.12
GSMUA_Achr3P10240_001	Banana	nucleus	36.45	39.03
GSMUA_Achr5P02450_001	Banana	nucleus	47.59	38.16
GSMUA_Achr11P...	Banana	nucleus	47.44	38.0
GSMUA_Achr11P...	Banana	nucleus	50.45	36.69
GSMUA_Achr11P...	Banana	nucleus	44.73	36.67
GSMUA_Achr6P19850_001	Banana	nucleus	47.14	36.61
GSMUA_Achr9P08310_001	Banana	vacuole	26.81	36.55
GSMUA_Achr4P25960_001	Banana	nucleus	43.52	36.08
GSMUA_Achr5P00590_001	Banana	nucleus	49.1	35.86
KRH73577	Soybean	nucleus	48.04	35.6
PGSC0003DMT400041127	Potato	nucleus	47.59	35.43
VIT_12s0028g01170.t01	Wine grape	nucleus	49.4	35.38
PGSC0003DMT400074169	Potato	nucleus	46.99	35.29
KRH14545	Soybean	nucleus	47.29	35.04
GSMUA_Achr1P20040_001	Banana	nucleus	36.14	30.69
GSMUA_Achr9P18170_001	Banana	nucleus	39.31	30.56
GSMUA_Achr10P...	Banana	nucleus	30.72	30.27
GSMUA_Achr6P07390_001	Banana	nucleus	29.52	29.92
GSMUA_Achr6P12780_001	Banana	nucleus	30.12	28.74
GSMUA_Achr9P14090_001	Banana	nucleus	39.31	28.68
GSMUA_Achr10P...	Banana	nucleus	28.46	28.34
GSMUA_Achr2P19760_001	Banana	nucleus	28.46	28.29
GSMUA_Achr3P05460_001	Banana	nucleus	40.96	27.95
GSMUA_Achr7P24330_001	Banana	nucleus	27.86	27.78
GSMUA_AchrUn_...	Banana	nucleus	26.51	27.72
GSMUA_Achr6P29070_001	Banana	nucleus, vacuole	29.07	27.69
GSMUA_Achr6P36980_001	Banana	nucleus	35.39	27.39
GSMUA_Achr10P...	Banana	nucleus	32.23	25.97
GSMUA_Achr8P23850_001	Banana	nucleus	41.42	25.77
GSMUA_Achr6P08090_001	Banana	nucleus	31.78	25.61
GSMUA_Achr6P01740_001	Banana	nucleus	37.8	24.16
GSMUA_Achr6P16450_001	Banana	nucleus	31.17	23.71
GSMUA_Achr5P05010_001	Banana	nucleus	31.02	23.65
GSMUA_AchrUn_...	Banana	nucleus	31.17	23.42
GSMUA_Achr1P20000_001	Banana	nucleus	33.73	23.07
GSMUA_Achr8P13620_001	Banana	nucleus	16.57	22.73
GSMUA_Achr1P20010_001	Banana	plasma membrane, plastid	31.48	19.9

Protein Annotations

MapMan:15.5.5.1	Gene3D:2.30.30.1040	Gene3D:2.40.330.10	InterPro:Auxin_resp	InterPro:B3_DNA-bd	InterPro:DNA-bd_pseudobarrel_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009725
GO:GO:0009734	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr1G08230_001	EnsemblPlants:GSMUA_Achr1P08230_001	EnsemblPlants:GSMUA_Achr1T08230_001	InterPro:IPR003340
InterPro:IPR015300	UniProt:M0RY31	PFAM:PF02362	PFAM:PF06507	PFscan:PS50863	PANTHER:PTHR31384
PANTHER:PTHR31384:SF3	SMART:SM01019	SUPFAM:SSF101936	UniParc:UPI000296E9A5	SEG:seg	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G08230_001]

Coordinates

chr1:-:6327844..6333417

Molecular Weight (calculated)

73290.7 Da

IEP (calculated)

7.199

GRAVY (calculated)

-0.155

Length

664 amino acids

Sequence
(BLAST)

001: MKLCLLVART GRRVLAHQPF FCGAGILEES PPVLCWNLQL VDVRITANTP NYIIPLRLNS ELWHACAGPL VSLPPVGSRV VYFPQGHSEL VAASTNRVTG
101: SLPSFPSLPP HLVCQLHNVT MLADEETDEV YAQMTLQALS PQNDLHLPTE LGTRSKHPTN YFRKTLTASD TSTHGCCSIP RRAAEKVFPP LDFSRDPPVQ
201: ELIAKDLHGN EWKFRHTFRG QPKRHLLTIG WTLFVNAKRL VAGDSVIFIW YGYSELLLGV RRAQSPQRVA SADAVHVGLV AAHAVATNSS FTLSYFPRAS
301: PSEFVIPLSK YVKAVLRTRL LVGMRFRMLF ETSESSVRRY MGKIIGIGDL DPVRWPNSHW RSVKVSWDEH AVGERQFRVS PWEIEPLPTF PMYPSPFPLG
401: MKHSWPTAVP CHHGEDDDNV DLASPLMCFQ NGGNLGFLSL NAHSSAAAPW MQPRFDAPML QAEMWPMAAA SGLLEKRVTD AAKQASAATL QPQQTPTPLG
501: QSLDHGGPPQ PPPPPAFLQI AQLNLEQILH QQAQQRSAAT AAAVAPPVQS LLLPPPPPVG YADFSPSIPP LQSPYDTYTI LHNSTDATLP AYSLTYPIDL
601: TSEDILSLHP SFHSSLESLP PLESFGGTSS RTLLDLILHT SWQLNECSNL SFNQVRLHAH VDPN

Best Arabidopsis Sequence Match ( AT1G30330.1 )
(BLAST)

001: MRLSSAGFNP QPHEGEKRVL NSELWHACAG PLVSLPPVGS RVVYFPQGHS EQVAASTNKE VDAHIPNYPS LHPQLICQLH NVTMHADVET DEVYAQMTLQ
101: PLNAQEQKDP YLPAELGVPS RQPTNYFCKT LTASDTSTHG GFSVPRRAAE KVFPPLDYSQ QPPAQELMAR DLHDNEWKFR HIFRGQPKRH LLTTGWSVFV
201: SAKRLVAGDS VLFIWNDKNQ LLLGIRRANR PQTVMPSSVL SSDSMHLGLL AAAAHAAATN SRFTIFYNPR ASPSEFVIPL AKYVKAVYHT RVSVGMRFRM
301: LFETEESSVR RYMGTITGIC DLDPTRWANS HWRSVKVGWD ESTAGERQPR VSLWEIEPLT TFPMYPSPFP LRLKRPWPPG LPSFHGLKED DMGMSMSSPL
401: MWDRGLQSLN FQGMGVNPWM QPRLDTSGLL GMQNDVYQAM AAAALQDMRG IDPAKAAASL LQFQNSPGFS MQSPSLVQPQ MLQQQLSQQQ QQLSQQQQQQ
501: QQLSQQQQQQ LSQQQQQQLS QQQQQQLSQQ QQQQAYLGVP ETHQPQSQAQ SQSNNHLSQQ QQQVVDNHNP SASSAAVVSA MSQFGSASQP NTSPLQSMTS
601: LCHQQSFSDT NGGNNPISPL HTLLSNFSQD ESSQLLHLTR TNSAMTSSGW PSKRPAVDSS FQHSGAGNNN TQSVLEQLGQ SHTSNVPPNA VSLPPFPGGR
701: ECSIEQEGSA SDPHSHLLFG VNIDSSSLLM PNGMSNLRSI GIEGGDSTTL PFTSSNFNND FSGNLAMTTP SSCIDESGFL QSSENLGSEN PQSNTFVKVY
801: KSGSFGRSLD ISKFSSYHEL RSELARMFGL EGQLEDPVRS GWQLVFVDRE NDVLLLGDDP WPEFVSSVWC IKILSPQEVQ QMGKRGLELL NSAPSSNNVD
901: KLPSNGNCDD FGNRSDPRNL GNGIASVGGS FNY

Arabidopsis Description

ARF6Auxin response factor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZTX8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.