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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr1P09750_001
GSMUA_Achr1P26140_001
GSMUA_Achr2P09210_001
GSMUA_Achr2P12630_001
GSMUA_Achr2P15340_001
GSMUA_Achr2P19760_001
GSMUA_Achr3P03400_001
GSMUA_Achr3P10240_001
GSMUA_Achr3P13070_001
GSMUA_Achr3P16300_001
GSMUA_Achr3P28230_001
GSMUA_Achr4P05200_001
GSMUA_Achr4P09450_001
GSMUA_Achr4P12950_001
GSMUA_Achr4P20150_001
GSMUA_Achr4P21020_001
GSMUA_Achr4P21030_001
GSMUA_Achr4P22520_001
GSMUA_Achr4P22530_001
GSMUA_Achr5P03110_001
GSMUA_Achr5P09310_001
GSMUA_Achr6P03870_001
GSMUA_Achr6P26730_001
GSMUA_Achr7P10930_001
GSMUA_Achr7P13680_001
GSMUA_Achr7P16390_001
GSMUA_Achr7P24330_001
GSMUA_Achr8P20610_001
GSMUA_Achr8P20620_001
GSMUA_Achr8P25220_001
GSMUA_Achr8P29850_001
GSMUA_Achr9P06290_001
GSMUA_Achr9P10690_001
GSMUA_Achr9P10700_001
GSMUA_Achr9P16800_001
GSMUA_Achr9P18170_001
GSMUA_Achr9P22600_001
GSMUA_Achr9P24330_001
GSMUA_Achr9P25550_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G19220.1 GSMUA_Achr10P... AT1G04250.1 21734647
AT1G19220.1 GSMUA_Achr4P21020_001 AT1G04250.1 21734647
AT1G19220.1 GSMUA_Achr4P22520_001 AT1G04250.1 21734647
AT1G19220.1 GSMUA_Achr8P20610_001 AT1G04250.1 21734647
AT1G19220.1 GSMUA_Achr9P10700_001 AT1G04250.1 21734647
AT1G19220.1 GSMUA_Achr9P25550_001 AT1G04250.1 21734647
AT1G19220.1 GSMUA_Achr10P... AT1G35240.1 21734647
AT1G19220.1 GSMUA_Achr2P19760_001 AT1G35240.1 21734647
AT1G19220.1 GSMUA_Achr7P24330_001 AT1G35240.1 21734647
AT1G19220.1 GSMUA_AchrUn_... AT1G35240.1 21734647
AT1G19220.1 GSMUA_Achr3P16300_001 AT1G51950.1 18505759
AT1G19220.1 GSMUA_Achr5P09310_001 AT1G51950.1 18505759
AT1G19220.1 GSMUA_Achr7P13680_001 AT1G51950.1 18505759
AT1G19220.1 GSMUA_AchrUn_... AT1G51950.1 18505759
AT1G19220.1 GSMUA_Achr8P29850_001 AT2G46990.1 21734647
AT1G19220.1 GSMUA_Achr9P16800_001 AT2G46990.1 21734647
AT1G19220.1 GSMUA_Achr10P... AT3G04730.1 21734647
AT1G19220.1 GSMUA_Achr4P21020_001 AT3G04730.1 21734647
AT1G19220.1 GSMUA_Achr4P22520_001 AT3G04730.1 21734647
AT1G19220.1 GSMUA_Achr8P20610_001 AT3G04730.1 21734647
AT1G19220.1 GSMUA_Achr9P10700_001 AT3G04730.1 21734647
AT1G19220.1 GSMUA_Achr9P25550_001 AT3G04730.1 21734647
AT1G19220.1 GSMUA_Achr10P... AT3G23050.1 21734647
AT1G19220.1 GSMUA_Achr4P21020_001 AT3G23050.1 21734647
AT1G19220.1 GSMUA_Achr4P22520_001 AT3G23050.1 21734647
AT1G19220.1 GSMUA_Achr8P20610_001 AT3G23050.1 21734647
AT1G19220.1 GSMUA_Achr9P10700_001 AT3G23050.1 21734647
AT1G19220.1 GSMUA_Achr9P25550_001 AT3G23050.1 21734647
AT1G19220.1 GSMUA_Achr11P... AT4G14560.1 21734647
AT1G19220.1 GSMUA_Achr2P12630_001 AT4G14560.1 21734647
AT1G19220.1 GSMUA_Achr4P05200_001 AT4G14560.1 21734647
AT1G19220.1 GSMUA_Achr4P21030_001 AT4G14560.1 21734647
AT1G19220.1 GSMUA_Achr4P22530_001 AT4G14560.1 21734647
AT1G19220.1 GSMUA_Achr5P03110_001 AT4G14560.1 21734647
AT1G19220.1 GSMUA_Achr8P20620_001 AT4G14560.1 21734647
AT1G19220.1 GSMUA_Achr9P10690_001 AT4G14560.1 21734647
AT1G19220.1 GSMUA_Achr9P24330_001 AT4G14560.1 21734647
AT1G19220.1 GSMUA_Achr11P... AT4G14560.1 9342315
AT1G19220.1 GSMUA_Achr2P12630_001 AT4G14560.1 9342315
AT1G19220.1 GSMUA_Achr4P05200_001 AT4G14560.1 9342315
AT1G19220.1 GSMUA_Achr4P21030_001 AT4G14560.1 9342315
AT1G19220.1 GSMUA_Achr4P22530_001 AT4G14560.1 9342315
AT1G19220.1 GSMUA_Achr5P03110_001 AT4G14560.1 9342315
AT1G19220.1 GSMUA_Achr8P20620_001 AT4G14560.1 9342315
AT1G19220.1 GSMUA_Achr9P10690_001 AT4G14560.1 9342315
AT1G19220.1 GSMUA_Achr9P24330_001 AT4G14560.1 9342315
AT1G19220.1 GSMUA_Achr10P... AT5G57420.1 21734647
AT1G19220.1 GSMUA_Achr6P03870_001 AT5G57420.1 21734647
AT1G19220.1 GSMUA_Achr7P16390_001 AT5G57420.1 21734647
AT5G20730.1 GSMUA_Achr10P... AT1G04250.1 21734647
AT5G20730.1 GSMUA_Achr4P21020_001 AT1G04250.1 21734647
AT5G20730.1 GSMUA_Achr4P22520_001 AT1G04250.1 21734647
AT5G20730.1 GSMUA_Achr8P20610_001 AT1G04250.1 21734647
AT5G20730.1 GSMUA_Achr9P10700_001 AT1G04250.1 21734647
AT5G20730.1 GSMUA_Achr9P25550_001 AT1G04250.1 21734647
AT5G20730.1 GSMUA_Achr3P16300_001 AT1G51950.1 18505759
AT5G20730.1 GSMUA_Achr5P09310_001 AT1G51950.1 18505759
AT5G20730.1 GSMUA_Achr7P13680_001 AT1G51950.1 18505759
AT5G20730.1 GSMUA_AchrUn_... AT1G51950.1 18505759
AT5G20730.1 GSMUA_Achr10P... AT3G23050.1 21734647
AT5G20730.1 GSMUA_Achr4P21020_001 AT3G23050.1 21734647
AT5G20730.1 GSMUA_Achr4P22520_001 AT3G23050.1 21734647
AT5G20730.1 GSMUA_Achr8P20610_001 AT3G23050.1 21734647
AT5G20730.1 GSMUA_Achr9P10700_001 AT3G23050.1 21734647
AT5G20730.1 GSMUA_Achr9P25550_001 AT3G23050.1 21734647
AT5G20730.1 GSMUA_Achr1P09750_001 AT3G50060.1 17675404
AT5G20730.1 GSMUA_Achr1P26140_001 AT3G50060.1 17675404
AT5G20730.1 GSMUA_Achr3P13070_001 AT3G50060.1 17675404
AT5G20730.1 GSMUA_Achr3P28230_001 AT3G50060.1 17675404
AT5G20730.1 GSMUA_Achr4P09450_001 AT3G50060.1 17675404
AT5G20730.1 GSMUA_Achr4P12950_001 AT3G50060.1 17675404
AT5G20730.1 GSMUA_Achr4P20150_001 AT3G50060.1 17675404
AT5G20730.1 GSMUA_Achr8P25220_001 AT3G50060.1 17675404
AT5G20730.1 GSMUA_Achr9P22600_001 AT3G50060.1 17675404
AT5G20730.1 GSMUA_AchrUn_... AT3G50060.1 17675404
AT5G20730.1 GSMUA_Achr11P... AT4G14560.1 14729917
AT5G20730.1 GSMUA_Achr2P12630_001 AT4G14560.1 14729917
AT5G20730.1 GSMUA_Achr4P05200_001 AT4G14560.1 14729917
AT5G20730.1 GSMUA_Achr4P21030_001 AT4G14560.1 14729917
AT5G20730.1 GSMUA_Achr4P22530_001 AT4G14560.1 14729917
AT5G20730.1 GSMUA_Achr5P03110_001 AT4G14560.1 14729917
AT5G20730.1 GSMUA_Achr8P20620_001 AT4G14560.1 14729917
AT5G20730.1 GSMUA_Achr9P10690_001 AT4G14560.1 14729917
AT5G20730.1 GSMUA_Achr9P24330_001 AT4G14560.1 14729917
AT5G20730.1 GSMUA_Achr11P... AT4G14560.1 21734647
AT5G20730.1 GSMUA_Achr2P12630_001 AT4G14560.1 21734647
AT5G20730.1 GSMUA_Achr4P05200_001 AT4G14560.1 21734647
AT5G20730.1 GSMUA_Achr4P21030_001 AT4G14560.1 21734647
AT5G20730.1 GSMUA_Achr4P22530_001 AT4G14560.1 21734647
AT5G20730.1 GSMUA_Achr5P03110_001 AT4G14560.1 21734647
AT5G20730.1 GSMUA_Achr8P20620_001 AT4G14560.1 21734647
AT5G20730.1 GSMUA_Achr9P10690_001 AT4G14560.1 21734647
AT5G20730.1 GSMUA_Achr9P24330_001 AT4G14560.1 21734647
AT5G20730.1 GSMUA_Achr11P... AT4G14560.1 9342315
AT5G20730.1 GSMUA_Achr2P12630_001 AT4G14560.1 9342315
AT5G20730.1 GSMUA_Achr4P05200_001 AT4G14560.1 9342315
AT5G20730.1 GSMUA_Achr4P21030_001 AT4G14560.1 9342315
AT5G20730.1 GSMUA_Achr4P22530_001 AT4G14560.1 9342315
AT5G20730.1 GSMUA_Achr5P03110_001 AT4G14560.1 9342315
AT5G20730.1 GSMUA_Achr8P20620_001 AT4G14560.1 9342315
AT5G20730.1 GSMUA_Achr9P10690_001 AT4G14560.1 9342315
AT5G20730.1 GSMUA_Achr9P24330_001 AT4G14560.1 9342315
AT5G20730.1 GSMUA_Achr10P... AT4G29080.1 21734647
AT5G20730.1 GSMUA_Achr10P... AT4G29080.1 21734647
AT5G20730.1 GSMUA_Achr10P... AT4G29080.1 21734647
AT5G20730.1 GSMUA_Achr2P09210_001 AT4G29080.1 21734647
AT5G20730.1 GSMUA_Achr2P15340_001 AT4G29080.1 21734647
AT5G20730.1 GSMUA_Achr3P03400_001 AT4G29080.1 21734647
AT5G20730.1 GSMUA_Achr6P26730_001 AT4G29080.1 21734647
AT5G20730.1 GSMUA_Achr7P10930_001 AT4G29080.1 21734647
AT5G20730.1 GSMUA_Achr9P06290_001 AT4G29080.1 21734647
AT5G20730.1 GSMUA_Achr3P10240_001 AT5G20730.1 14729917
AT5G20730.1 GSMUA_Achr9P18170_001 AT5G20730.1 14729917
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr3P10240_001 Banana nucleus 48.01 66.13
GSMUA_Achr8P13630_001 Banana cytosol, nucleus, plastid 22.37 63.88
KRH37536 Soybean nucleus 63.7 48.36
KXG19536 Sorghum nucleus 59.6 48.34
Os06t0196700-02 Rice nucleus 59.37 48.06
KRH12587 Soybean nucleus 63.11 48.04
Zm00001d045026_P002 Maize nucleus 59.02 47.86
KRH19355 Soybean nucleus 63.23 47.75
KRH02575 Soybean nucleus 63.47 47.71
VIT_11s0016g00640.t01 Wine grape nucleus 64.29 47.53
CDX96672 Canola nucleus 56.56 47.35
GSMUA_Achr9P14090_001 Banana nucleus 50.0 46.92
TraesCS7D01G161900.1 Wheat nucleus 58.43 46.85
TraesCS7A01G160800.1 Wheat nucleus 58.43 46.81
GSMUA_AchrUn_... Banana mitochondrion 27.99 46.77
Solyc07g042260.2.1 Tomato nucleus 62.18 46.7
CDX83778 Canola nucleus 55.74 46.67
CDX92437 Canola nucleus 56.67 46.54
Bra016517.1-P Field mustard nucleus 55.04 46.53
CDY26690 Canola nucleus 57.03 46.43
Bra025720.1-P Field mustard nucleus 57.03 46.43
GSMUA_Achr3P05460_001 Banana nucleus 52.81 46.35
TraesCS7B01G065800.2 Wheat plastid 58.67 46.35
HORVU7Hr1G033820.5 Barley nucleus 57.49 46.06
Bra020125.1-P Field mustard nucleus 59.25 46.0
AT1G19220.1 Thale cress nucleus 58.2 45.76
CDY41030 Canola nucleus 56.67 45.75
PGSC0003DMT400006151 Potato nucleus 61.71 45.55
CDY45069 Canola nucleus 59.02 45.28
GSMUA_Achr3P23290_001 Banana nucleus 43.33 45.12
CDY16560 Canola nucleus 53.98 44.24
GSMUA_Achr5P26580_001 Banana nucleus 41.8 44.24
AT5G20730.1 Thale cress nucleus 60.07 44.03
GSMUA_Achr5P02450_001 Banana nucleus 42.39 43.72
GSMUA_Achr4P25960_001 Banana nucleus 40.4 43.07
GSMUA_Achr11P... Banana nucleus 41.8 43.06
GSMUA_Achr11P... Banana nucleus 40.05 42.22
GSMUA_Achr6P19850_001 Banana nucleus 42.04 41.99
GSMUA_Achr5P05010_001 Banana nucleus 42.27 41.45
GSMUA_Achr8P23850_001 Banana nucleus 51.64 41.33
GSMUA_Achr1P20040_001 Banana nucleus 37.12 40.54
GSMUA_Achr11P... Banana nucleus 43.21 40.42
GSMUA_Achr5P00590_001 Banana nucleus 42.86 40.26
GSMUA_Achr6P01740_001 Banana nucleus 48.59 39.94
GSMUA_Achr1P08230_001 Banana mitochondrion 30.56 39.31
GSMUA_Achr6P36980_001 Banana nucleus 37.7 37.53
GSMUA_Achr9P08310_001 Banana vacuole 21.31 37.37
GSMUA_Achr6P07390_001 Banana nucleus 27.17 35.42
GSMUA_Achr10P... Banana nucleus 27.87 35.31
GSMUA_Achr6P12780_001 Banana nucleus 28.69 35.2
GSMUA_Achr2P19760_001 Banana nucleus 27.4 35.03
GSMUA_Achr10P... Banana nucleus 26.93 34.48
Bra002327.1-P Field mustard nucleus 57.85 34.33
GSMUA_AchrUn_... Banana nucleus 24.94 33.54
GSMUA_Achr6P29070_001 Banana nucleus, vacuole 26.7 32.71
GSMUA_Achr1P20000_001 Banana nucleus 35.6 31.31
GSMUA_Achr7P24330_001 Banana nucleus 24.36 31.23
GSMUA_Achr10P... Banana nucleus 28.34 29.37
GSMUA_Achr6P08090_001 Banana nucleus 28.22 29.25
GSMUA_Achr6P16450_001 Banana nucleus 28.92 28.29
GSMUA_Achr8P13620_001 Banana nucleus 15.81 27.89
GSMUA_Achr1P20010_001 Banana plasma membrane, plastid 34.07 27.71
GSMUA_AchrUn_... Banana nucleus 27.99 27.04
Protein Annotations
MapMan:15.5.5.1Gene3D:2.30.30.1040Gene3D:2.40.330.10Gene3D:3.10.20.90InterPro:AUX/IAA_domInterPro:Auxin_resp
InterPro:B3_DNA-bdInterPro:DNA-bd_pseudobarrel_sfGO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139
GO:GO:0006351GO:GO:0006355GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009719GO:GO:0009725GO:GO:0009734GO:GO:0009987EnsemblPlantsGene:GSMUA_Achr9G18170_001
EnsemblPlants:GSMUA_Achr9P18170_001EnsemblPlants:GSMUA_Achr9T18170_001InterPro:IPR000270InterPro:IPR003340InterPro:IPR015300UniProt:M0U1C4
InterPro:PB1_domPFAM:PF02309PFAM:PF02362PFAM:PF06507PFscan:PS50863PFscan:PS51745
PANTHER:PTHR31384PANTHER:PTHR31384:SF21SMART:SM01019SUPFAM:SSF101936SUPFAM:SSF54277UniParc:UPI000296CA30
SEG:seg:::::
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G18170_001]
Coordinates
chr9:+:12722974..12730907
Molecular Weight (calculated)
95784.4 Da
IEP (calculated)
7.173
GRAVY (calculated)
-0.424
Length
854 amino acids
Sequence
(BLAST)
001: MIVCATVCEA GEKKRIDSEL WHACAGPLVS LPPVGSLVVY FPQGHSEQVA ATMQKEIDGI PNYPSLPSKL ICVLLDVTMH ADAETDEVYA QMTLQPVNKY
101: DREAMLASEI GLKQNKQPAE FFCKTLTASD TSTHGGFSVP RRAAEKIFPA LDFTMQPPAQ ELVAKDLHDV SWTFRHIYRG QPKRHLLTTG WSVFVSTKRL
201: SAGDSVLFIR DEKSQLLLGI RRANRQQHAL SSSVLSSDSM HIGILAAAAH AATNNSPFTI FYNPRASRSE FVIPLAKYNK AIYTQVSLGM RFRMMFETED
301: SGVRRYMGTI TGISDLDPVR WKNSQWRNLQ VGWDESTATE RRTRVSIWEI EPVVTPFYMC PPPYLRPNFA TSPGVPGRQV INQGHVIISP IPHVSYRGQE
401: LFSLFYLLNH IFCKRKSFLN DTFYIEHFVN FNFLERSIDN TSIYWKNSQT TQDGVVTEDP TKMLSFQTPA ASGPSFNSKS SPQAQLNQTL QLPHQLQQQP
501: HLLTQSSVSM QHQLQSSPLQ QKSINLQQQQ FQQPGQLQHQ SPLPQILPLS PPLQSQLSQQ LTQQNQHFQD FQQQLDGSNL LPLQSDQLHQ AHKSSALDSQ
601: KSPLLLRTQS SLSGTNVPCS SNFPSTNSNI DSLSLHNHRD NFLLGTMPDT LLSRGLGTRK DIQNLVSGYG QQKDIDTELS TADISSQSFG VPDMSFKPGC
701: STDVVVTEGV LNRGVWANQP PPPPRMRTYT KVQKRGSVGR CIDVTRYKGY DDLRRDLARM FGIEGQLEDT YRTDWKLVYV DHENDILLVG DDPWEEFVSC
801: VQSIKILSAA EVQQMSLDGN LTSLSVRTEA CSGSNSGNPW RGQFDDASFA SFHH
Best Arabidopsis Sequence Match ( AT1G19220.1 )
(BLAST)
0001: MKAPSNGFLP SSNEGEKKPI NSQLWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMQKQ TDFIPNYPNL PSKLICLLHS VTLHADTETD EVYAQMTLQP
0101: VNKYDREALL ASDMGLKLNR QPTEFFCKTL TASDTSTHGG FSVPRRAAEK IFPPLDFSMQ PPAQEIVAKD LHDTTWTFRH IYRGQPKRHL LTTGWSVFVS
0201: TKRLFAGDSV LFVRDEKSQL MLGIRRANRQ TPTLSSSVIS SDSMHIGILA AAAHANANSS PFTIFFNPRA SPSEFVVPLA KYNKALYAQV SLGMRFRMMF
0301: ETEDCGVRRY MGTVTGISDL DPVRWKGSQW RNLQVGWDES TAGDRPSRVS IWEIEPVITP FYICPPPFFR PKYPRQPGMP DDELDMENAF KRAMPWMGED
0401: FGMKDAQSSM FPGLSLVQWM SMQQNNPLSG SATPQLPSAL SSFNLPNNFA SNDPSKLLNF QSPNLSSANS QFNKPNTVNH ISQQMQAQPA MVKSQQQQQQ
0501: QQQQHQHQQQ QLQQQQQLQM SQQQVQQQGI YNNGTIAVAN QVSCQSPNQP TGFSQSQLQQ QSMLPTGAKM THQNINSMGN KGLSQMTSFA QEMQFQQQLE
0601: MHNSSQLLRN QQEQSSLHSL QQNLSQNPQQ LQMQQQSSKP SPSQQLQLQL LQKLQQQQQQ QSIPPVSSSL QPQLSALQQT QSHQLQQLLS SQNQQPLAHG
0701: NNSFPASTFM QPPQIQVSPQ QQGQMSNKNL VAAGRSHSGH TDGEAPSCST SPSANNTGHD NVSPTNFLSR NQQQGQAASV SASDSVFERA SNPVQELYTK
0801: TESRISQGMM NMKSAGEHFR FKSAVTDQID VSTAGTTYCP DVVGPVQQQQ TFPLPSFGFD GDCQSHHPRN NLAFPGNLEA VTSDPLYSQK DFQNLVPNYG
0901: NTPRDIETEL SSAAISSQSF GIPSIPFKPG CSNEVGGIND SGIMNGGGLW PNQTQRMRTY TKVQKRGSVG RSIDVTRYSG YDELRHDLAR MFGIEGQLED
1001: PLTSDWKLVY TDHENDILLV GDDPWEEFVN CVQNIKILSS VEVQQMSLDG DLAAIPTTNQ ACSETDSGNA WKVHYEDTSA AASFNR
Arabidopsis Description
ARF19Auxin response factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q8RYC8]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.