Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX87863 | Canola | nucleus | 38.31 | 46.46 |
| AT3G16500.1 | Thale cress | nucleus | 39.29 | 44.98 |
| CDX88204 | Canola | cytosol, nucleus, peroxisome | 25.32 | 44.83 |
| CDX80545 | Canola | cytosol, nucleus, plastid | 25.32 | 44.83 |
| AT5G25890.1 | Thale cress | nucleus | 25.32 | 44.57 |
| Bra009867.1-P | Field mustard | cytosol | 25.32 | 44.32 |
| Bra021184.1-P | Field mustard | nucleus | 38.64 | 44.24 |
| CDY34957 | Canola | nucleus | 38.64 | 44.24 |
| CDX87072 | Canola | cytosol | 25.0 | 44.0 |
| CDY64626 | Canola | cytosol | 38.31 | 43.87 |
| CDY43104 | Canola | nucleus | 37.99 | 43.82 |
| Bra036557.1-P | Field mustard | nucleus | 24.68 | 43.43 |
| GSMUA_Achr3P16300_001 | Banana | endoplasmic reticulum, golgi, mitochondrion, plastid | 32.14 | 43.42 |
| AT1G51950.1 | Thale cress | nucleus | 37.34 | 43.07 |
| Bra014303.1-P | Field mustard | nucleus | 37.34 | 42.59 |
| CDX75884 | Canola | cytosol | 37.34 | 42.44 |
| CDY22876 | Canola | nucleus | 34.74 | 42.29 |
| CDY46538 | Canola | nucleus | 37.01 | 42.22 |
| KRH09948 | Soybean | nucleus | 43.83 | 42.19 |
| CDX82399 | Canola | nucleus | 37.01 | 41.91 |
| Bra001634.1-P | Field mustard | nucleus | 37.01 | 41.91 |
| Bra018938.1-P | Field mustard | nucleus | 34.42 | 41.9 |
| Solyc03g121060.2.1 | Tomato | nucleus | 38.96 | 41.81 |
| CDX92077 | Canola | nucleus | 38.64 | 41.75 |
| Bra022164.1-P | Field mustard | nucleus | 38.64 | 41.75 |
| PGSC0003DMT400006709 | Potato | nucleus | 38.31 | 41.7 |
| CDY33844 | Canola | nucleus | 34.09 | 41.5 |
| GSMUA_Achr7P13680_001 | Banana | nucleus | 49.35 | 41.42 |
| CDY53439 | Canola | nucleus | 36.36 | 41.03 |
| GSMUA_Achr5P09310_001 | Banana | endoplasmic reticulum | 31.17 | 40.85 |
| CDY19790 | Canola | cytosol | 24.68 | 38.97 |
| KRH23388 | Soybean | nucleus | 42.86 | 38.15 |
| TraesCS1B01G356600.1 | Wheat | cytosol | 35.71 | 37.04 |
| KRH47203 | Soybean | nucleus | 37.99 | 36.91 |
| TraesCS1D01G345400.1 | Wheat | nucleus | 35.06 | 36.61 |
| KRH44271 | Soybean | nucleus | 37.01 | 36.42 |
| TraesCS3D01G276600.1 | Wheat | cytosol, mitochondrion, nucleus | 39.29 | 36.12 |
| TraesCS1A01G343300.1 | Wheat | nucleus | 34.42 | 36.05 |
| Os01t0741900-01 | Rice | nucleus | 38.96 | 35.82 |
| TraesCS3A01G276500.1 | Wheat | cytosol, mitochondrion, nucleus | 39.29 | 35.48 |
| TraesCS3B01G310500.1 | Wheat | cytosol, mitochondrion, nucleus | 39.29 | 35.28 |
| Os05t0523300-01 | Rice | nucleus | 37.01 | 34.86 |
| GSMUA_Achr9P26900_001 | Banana | plastid | 13.31 | 34.45 |
| HORVU3Hr1G070620.5 | Barley | cytosol, mitochondrion, nucleus | 39.29 | 34.28 |
| VIT_04s0008g00220.t01 | Wine grape | nucleus | 37.99 | 33.91 |
| KXG33336 | Sorghum | nucleus | 37.99 | 32.05 |
| Zm00001d043515_P002 | Maize | cytosol, mitochondrion, nucleus | 37.01 | 31.93 |
| VIT_09s0002g03410.t01 | Wine grape | nucleus | 45.13 | 31.66 |
| Zm00001d038784_P001 | Maize | nucleus | 34.74 | 30.31 |
| GSMUA_Achr9P26910_001 | Banana | nucleus | 13.96 | 29.66 |
| KXG22376 | Sorghum | nucleus | 32.47 | 28.99 |
| GSMUA_Achr9P16800_001 | Banana | nucleus | 15.91 | 28.16 |
| GSMUA_Achr8P29850_001 | Banana | nucleus | 15.26 | 26.7 |
| GSMUA_Achr7P03120_001 | Banana | nucleus | 19.16 | 23.98 |
| GSMUA_Achr11P... | Banana | nucleus | 23.05 | 23.67 |
| GSMUA_Achr2P04230_001 | Banana | nucleus | 22.08 | 22.37 |
| GSMUA_AchrUn_... | Banana | nucleus | 22.73 | 22.36 |
| GSMUA_Achr10P... | Banana | nucleus | 21.75 | 21.61 |
| GSMUA_Achr6P29100_001 | Banana | nucleus | 17.53 | 18.24 |
| GSMUA_Achr9P08370_001 | Banana | nucleus | 14.94 | 18.11 |
Protein Annotations
| MapMan:11.2.2.1.2 | Gene3D:3.10.20.90 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_AchrUn_randomG03520_001 | EnsemblPlants:GSMUA_AchrUn_randomP03520_001 |
| EnsemblPlants:GSMUA_AchrUn_randomT03520_001 | InterPro:IPR000270 | UniProt:M0U614 | InterPro:PB1_dom | PFAM:PF02309 | PFscan:PS51745 |
| PANTHER:PTHR31734 | PANTHER:PTHR31734:SF2 | SUPFAM:SSF54277 | UniParc:UPI000294CE08 | : | : |
Description
Putative Auxin-responsive protein IAA26 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG03520_001]
Coordinates
chrchrUn_random:+:17129519..17133504
Molecular Weight (calculated)
33639.2 Da
IEP (calculated)
6.535
GRAVY (calculated)
-0.383
Length
308 amino acids
Sequence
(BLAST)
(BLAST)
001: MINAALKHLL IPSIKRDEEG EGGVGSRHCD TLATPRTSLS LSLPWAASVG VLLSSEHALL PLSDLAKDME EEFTRGEGRP RLLDLIPNGR EWGSYAAAEE
101: KKLELRLGLP GGEDWSAGQE KREHPVESAL SLDHISKVRK STNVNASSGT KRGFLVQVEP KTEAAATPVV GWPPAAKKLE NDRKSLFVKI NMDGIPIGRK
201: VDLKAYDSYD KLSLAVDELF RGLMAAQADP LAPSIRKNSE EKHVLIGLLD GSGEYTLVYE DDEGDRMLVG DVPWDMFVSM AKRLRVLKSS DLSASSLRAV
301: GRKRTSNS
101: KKLELRLGLP GGEDWSAGQE KREHPVESAL SLDHISKVRK STNVNASSGT KRGFLVQVEP KTEAAATPVV GWPPAAKKLE NDRKSLFVKI NMDGIPIGRK
201: VDLKAYDSYD KLSLAVDELF RGLMAAQADP LAPSIRKNSE EKHVLIGLLD GSGEYTLVYE DDEGDRMLVG DVPWDMFVSM AKRLRVLKSS DLSASSLRAV
301: GRKRTSNS
001: MEGCPRNREI GPKLLDLIPQ GRKWYQEDKN NTDQEKKLEL RLGPPGGDEE DHSAIKKKNT EIRNIKKETE DKSFHCFNGN HFSPSNKTTS VPHISQKRTA
101: PGPVVGWPPV RSFRKNLAST SSSKLGNESS HGGQINKSDD GEKQVETKKE GMFVKINMDG VPIGRKVDLN AYNSYEQLSF VVDKLFRGLL AAQRDISDGQ
201: GEEKPIIGLL DGKGEFTLTY EDNEGDKMLV GDVPWQMFVS SVKRLRVIKS SEISSALTFG CSKQEKMMH
101: PGPVVGWPPV RSFRKNLAST SSSKLGNESS HGGQINKSDD GEKQVETKKE GMFVKINMDG VPIGRKVDLN AYNSYEQLSF VVDKLFRGLL AAQRDISDGQ
201: GEEKPIIGLL DGKGEFTLTY EDNEGDKMLV GDVPWQMFVS SVKRLRVIKS SEISSALTFG CSKQEKMMH
Arabidopsis Description
IAA26Auxin-responsive protein IAA26 [Source:UniProtKB/Swiss-Prot;Acc:Q8LAL2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.