Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG22376 | Sorghum | nucleus | 70.54 | 72.17 |
| Os05t0523300-01 | Rice | nucleus | 52.12 | 56.27 |
| TraesCS1D01G345400.1 | Wheat | nucleus | 45.89 | 54.92 |
| TraesCS1A01G343300.1 | Wheat | nucleus | 45.33 | 54.42 |
| TraesCS1B01G356600.1 | Wheat | cytosol | 45.33 | 53.87 |
| Zm00001d043515_P002 | Maize | cytosol, mitochondrion, nucleus | 48.16 | 47.62 |
| AT5G25890.1 | Thale cress | nucleus | 22.38 | 45.14 |
| CDX87072 | Canola | cytosol | 22.38 | 45.14 |
| Bra009867.1-P | Field mustard | cytosol | 22.38 | 44.89 |
| CDX88204 | Canola | cytosol, nucleus, peroxisome | 22.1 | 44.83 |
| CDX80545 | Canola | cytosol, nucleus, plastid | 22.1 | 44.83 |
| Bra036557.1-P | Field mustard | nucleus | 21.81 | 44.0 |
| PGSC0003DMT400006709 | Potato | nucleus | 33.14 | 41.34 |
| Solyc03g121060.2.1 | Tomato | nucleus | 33.43 | 41.12 |
| KRH09948 | Soybean | nucleus | 36.83 | 40.62 |
| CDY19790 | Canola | cytosol | 22.1 | 40.0 |
| CDY64626 | Canola | cytosol | 30.03 | 39.41 |
| Bra021184.1-P | Field mustard | nucleus | 29.75 | 39.03 |
| CDY34957 | Canola | nucleus | 29.75 | 39.03 |
| Zm00001d039513_P001 | Maize | cytosol, nucleus, plastid | 25.21 | 38.86 |
| KRH47203 | Soybean | nucleus | 34.84 | 38.8 |
| KRH44271 | Soybean | nucleus | 33.99 | 38.34 |
| CDY43104 | Canola | nucleus | 28.9 | 38.2 |
| CDX87863 | Canola | nucleus | 27.48 | 38.19 |
| AT3G16500.1 | Thale cress | nucleus | 28.9 | 37.92 |
| KRH23388 | Soybean | nucleus | 36.83 | 37.57 |
| CDX82399 | Canola | nucleus | 28.9 | 37.5 |
| Bra001634.1-P | Field mustard | nucleus | 28.9 | 37.5 |
| AT1G51950.1 | Thale cress | nucleus | 28.33 | 37.45 |
| Bra014303.1-P | Field mustard | nucleus | 28.61 | 37.41 |
| VIT_04s0008g00220.t01 | Wine grape | nucleus | 36.54 | 37.39 |
| CDX75884 | Canola | cytosol | 28.61 | 37.27 |
| CDY46538 | Canola | nucleus | 28.33 | 37.04 |
| Zm00001d010360_P001 | Maize | cytosol, nucleus | 23.8 | 36.84 |
| CDY33844 | Canola | nucleus | 26.35 | 36.76 |
| CDY22876 | Canola | nucleus | 26.06 | 36.36 |
| CDY53439 | Canola | nucleus | 28.05 | 36.26 |
| Zm00001d016277_P002 | Maize | nucleus | 30.59 | 36.12 |
| Bra018938.1-P | Field mustard | nucleus | 25.78 | 35.97 |
| Bra022164.1-P | Field mustard | nucleus | 28.9 | 35.79 |
| CDX92077 | Canola | nucleus | 28.9 | 35.79 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.31 | 34.74 |
| Zm00001d037691_P003 | Maize | cytosol, nucleus | 23.51 | 33.6 |
| GSMUA_Achr7P13680_001 | Banana | nucleus | 34.56 | 33.24 |
| VIT_09s0002g03410.t01 | Wine grape | nucleus | 36.54 | 29.39 |
| Zm00001d049715_P001 | Maize | nucleus | 17.28 | 26.18 |
| Zm00001d000288_P001 | Maize | cytosol | 12.46 | 22.34 |
| Zm00001d051911_P002 | Maize | nucleus | 18.41 | 22.11 |
| Zm00001d045203_P001 | Maize | cytosol | 13.03 | 21.3 |
| Zm00001d018414_P001 | Maize | nucleus | 11.61 | 19.9 |
| Zm00001d040541_P001 | Maize | nucleus, plastid | 10.2 | 19.89 |
| Zm00001d004697_P001 | Maize | nucleus | 17.0 | 17.19 |
| Zm00001d008201_P001 | Maize | cytosol | 5.95 | 16.15 |
| Zm00001d049141_P002 | Maize | nucleus | 16.15 | 16.06 |
Protein Annotations
| MapMan:11.2.2.1.2 | Gene3D:3.10.20.90 | UniProt:A0A1D6MAK0 | ProteinID:AQK87805.1 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009734 |
| GO:GO:0009987 | InterPro:IPR000270 | InterPro:PB1_dom | PFAM:PF02309 | PFscan:PS51745 | PANTHER:PTHR31734 |
| PANTHER:PTHR31734:SF90 | SUPFAM:SSF54277 | UniParc:UPI0008434A51 | EnsemblPlantsGene:Zm00001d038784 | EnsemblPlants:Zm00001d038784_P001 | EnsemblPlants:Zm00001d038784_T001 |
| SEG:seg | : | : | : | : | : |
Description
Aux/IAA-transcription factor 30Auxin-responsive protein IAA26
Coordinates
chr6:+:164332917..164336206
Molecular Weight (calculated)
37678.8 Da
IEP (calculated)
4.742
GRAVY (calculated)
-0.558
Length
353 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDSSGERGP PSTPQLLNLI RDEREWTVTR EVVEDGGAGS TSATATAASP DHPEEDDYSK LELRLCLPGA QDDERTPPPP GEKGTCTALS LGSGCFPSHP
101: KLAASAGASA TAATWAKRGF LATVGAKAQG YCRQEEDSEG CGNELTLGGE NMAGETKKGC CCPPSSSHDS DAGPAVHRGD VLPVVGWPPV RSFRRNLANA
201: SSSKQSLEQQ QQNDDEASCD KAKQTCKRSP LIKINMDGIP IGRKINLSAY DSYQKLSSAV QDLFCGFLDD FFSSKDCGFG CLAAQKDESR GRGAEEKMFS
301: GLLDGTGEYT LVCEDSEGGR TLVGHLPWNV FVSTAKRLRV MESSELPHGL MWC
101: KLAASAGASA TAATWAKRGF LATVGAKAQG YCRQEEDSEG CGNELTLGGE NMAGETKKGC CCPPSSSHDS DAGPAVHRGD VLPVVGWPPV RSFRRNLANA
201: SSSKQSLEQQ QQNDDEASCD KAKQTCKRSP LIKINMDGIP IGRKINLSAY DSYQKLSSAV QDLFCGFLDD FFSSKDCGFG CLAAQKDESR GRGAEEKMFS
301: GLLDGTGEYT LVCEDSEGGR TLVGHLPWNV FVSTAKRLRV MESSELPHGL MWC
001: MEGCPRNREI GPKLLDLIPQ GRKWYQEDKN NTDQEKKLEL RLGPPGGDEE DHSAIKKKNT EIRNIKKETE DKSFHCFNGN HFSPSNKTTS VPHISQKRTA
101: PGPVVGWPPV RSFRKNLAST SSSKLGNESS HGGQINKSDD GEKQVETKKE GMFVKINMDG VPIGRKVDLN AYNSYEQLSF VVDKLFRGLL AAQRDISDGQ
201: GEEKPIIGLL DGKGEFTLTY EDNEGDKMLV GDVPWQMFVS SVKRLRVIKS SEISSALTFG CSKQEKMMH
101: PGPVVGWPPV RSFRKNLAST SSSKLGNESS HGGQINKSDD GEKQVETKKE GMFVKINMDG VPIGRKVDLN AYNSYEQLSF VVDKLFRGLL AAQRDISDGQ
201: GEEKPIIGLL DGKGEFTLTY EDNEGDKMLV GDVPWQMFVS SVKRLRVIKS SEISSALTFG CSKQEKMMH
Arabidopsis Description
IAA26Auxin-responsive protein IAA26 [Source:UniProtKB/Swiss-Prot;Acc:Q8LAL2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.