Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES16569 | Sorghum | plastid | 88.83 | 89.33 |
| Os06t0308000-01 | Rice | plastid | 80.49 | 79.14 |
| TraesCS7D01G224400.1 | Wheat | plastid | 78.6 | 78.9 |
| HORVU7Hr1G045680.1 | Barley | plastid | 78.6 | 78.9 |
| TraesCS7B01G129300.1 | Wheat | plastid | 78.41 | 78.71 |
| TraesCS7A01G222800.1 | Wheat | plastid | 78.41 | 78.71 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane | 59.66 | 55.26 |
| VIT_19s0090g01210.t01 | Wine grape | plastid | 56.06 | 55.22 |
| Zm00001d000318_P001 | Maize | peroxisome | 28.98 | 53.87 |
| Bra002923.1-P | Field mustard | cytosol, nucleus, plastid | 6.06 | 52.46 |
| Solyc07g064950.2.1 | Tomato | nucleus, plastid | 51.7 | 51.8 |
| Zm00001d047056_P001 | Maize | plastid | 32.95 | 51.79 |
| KRH26213 | Soybean | cytosol, extracellular, nucleus, plastid | 11.36 | 51.72 |
| PGSC0003DMT400057431 | Potato | plastid | 52.84 | 51.1 |
| CDY20778 | Canola | plastid | 51.7 | 50.09 |
| Bra035563.1-P | Field mustard | plastid | 51.52 | 49.91 |
| CDY06597 | Canola | plastid | 51.7 | 49.82 |
| AT5G55220.1 | Thale cress | plastid | 51.52 | 49.73 |
| KRH73811 | Soybean | plastid | 50.95 | 49.63 |
| KRH14319 | Soybean | plastid | 50.95 | 49.36 |
| CDY19904 | Canola | plastid | 11.93 | 38.89 |
| CDY19903 | Canola | extracellular | 10.23 | 38.57 |
| Zm00001d013704_P001 | Maize | plastid | 14.39 | 33.78 |
| CDY17312 | Canola | endoplasmic reticulum | 24.24 | 33.42 |
| KRH14348 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 16.1 | 32.44 |
Protein Annotations
| Gene3D:1.10.3120.10 | EntrezGene:103640683 | MapMan:18.12.3 | Gene3D:3.10.50.40 | Gene3D:3.30.70.1050 | ProteinID:AQK38855.1 |
| ProteinID:AQK38856.1 | GO:GO:0006457 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015031 |
| InterPro:IPR036611 | InterPro:IPR037041 | UniProt:K7TWH1 | HAMAP:MF_00303 | PFAM:PF05697 | PFAM:PF05698 |
| PANTHER:PTHR30560 | PANTHER:PTHR30560:SF3 | SUPFAM:SSF102735 | SUPFAM:SSF109998 | SUPFAM:SSF54534 | TIGRFAMs:TIGR00115 |
| InterPro:Trig_fac | InterPro:Trigger_fac_C | InterPro:Trigger_fac_C_sf | InterPro:Trigger_fac_ribosome-bd_bac | InterPro:Trigger_fac_ribosome-bd_sf | InterPro:Trigger_fact/SurA_dom_sf |
| UniParc:UPI000221F315 | EnsemblPlantsGene:Zm00001d023292 | EnsemblPlants:Zm00001d023292_P001 | EnsemblPlants:Zm00001d023292_T001 | SEG:seg | : |
Description
Trigger factor-like protein TIG Chloroplastic
Coordinates
chr10:-:2237430..2246135
Molecular Weight (calculated)
59140.2 Da
IEP (calculated)
5.038
GRAVY (calculated)
-0.330
Length
528 amino acids
Sequence
(BLAST)
(BLAST)
001: MELATVAAAV ASAAARPHGP FSSPRAVSAS VSWTSLSLAY TSRCLSSTSS RRRLRWLPVT SAAVELREAT AGGGDSLRVT KTPQPGSSVK FSVEVPTSII
101: HECYQSTLQE YAKRVKVPGF RPGKTIPENV LINYVGPQHV QDATIEAILK HTLPQALSSV EERALEDSVR ILTQFDDMRN SFSLDNVFRY DVAVDVAPEV
201: RWLSEDKYRN LKVVVEIDEA VDAEKAAEKE LQRRHKALGL LRIVADRGLQ IGDLVVLDIF AESINNDGSR GEKISSAEST GFHLDTEENS NLVPGFLGSL
301: IGIRAGETRS FPIQFPESFE RESLRGVRAQ FTVVCKELFY RELPVMDDSL AVKLLPGCTT IDEVRERILK RCKEVEKTAI EQATDNAILD QLGKLVEVDV
401: PRALFQEQGQ QLYGAKLLQL QAERKLDKDQ LASLSTKRSV QAYLEDEKEN ITRIIKQMLA VGDIFKSENL QYSTDQLVKE VENSIAEFKQ YNQDYDEDNI
501: RQQVQDVLEA AKVLEWLKEN CSVEYIRR
101: HECYQSTLQE YAKRVKVPGF RPGKTIPENV LINYVGPQHV QDATIEAILK HTLPQALSSV EERALEDSVR ILTQFDDMRN SFSLDNVFRY DVAVDVAPEV
201: RWLSEDKYRN LKVVVEIDEA VDAEKAAEKE LQRRHKALGL LRIVADRGLQ IGDLVVLDIF AESINNDGSR GEKISSAEST GFHLDTEENS NLVPGFLGSL
301: IGIRAGETRS FPIQFPESFE RESLRGVRAQ FTVVCKELFY RELPVMDDSL AVKLLPGCTT IDEVRERILK RCKEVEKTAI EQATDNAILD QLGKLVEVDV
401: PRALFQEQGQ QLYGAKLLQL QAERKLDKDQ LASLSTKRSV QAYLEDEKEN ITRIIKQMLA VGDIFKSENL QYSTDQLVKE VENSIAEFKQ YNQDYDEDNI
501: RQQVQDVLEA AKVLEWLKEN CSVEYIRR
001: MELCVISTTT TVKAINPFLP SITRRVSSRL FQSDSVLQFG GRLKKPISRP LDMSCVSRKI GFFGDFMSHG GNFRLFAAAS PAVETSVKED KLPADLKVTE
101: TVQANSSVKL SVEVPEIVCE DCYQRVLTEF MKLSKVPGFR PKTRVPENII VGFVGRQYVL RATVESILKR TLPHAMESVT GRALKDSIQI VSSFPDMEKA
201: YSKLKTLSYE VVVDVVPELK WNPEDGYKNM KVVVELGDEI DAKKACERQL RQKYKSLGAL KIVTERGLQV GDLAVVDISA TTIDEDGSTG QAIPDAESKG
301: FHFDTEEGNR LLPGFLDAII GIRAGESKSF TLVFPESWKQ ESLRGQRAQF TVDCKELFYR DLPTLDDSLA DKLLPGCTTL KEVEETLAKR CQEMEQEAKE
401: QATDNAILEQ IRKMVEVEIP QSLFEEQGRQ FYGARLLEIQ GNMKLNEDQL ASLSSQKAVN EFLETQRESI TNIIKQNIAV GDIFKRENLE FSTDELVKEV
501: ENSISEFKKH KQEFDEERVK DQVQEILEGA KVLEWLKDRA EIQYITR
101: TVQANSSVKL SVEVPEIVCE DCYQRVLTEF MKLSKVPGFR PKTRVPENII VGFVGRQYVL RATVESILKR TLPHAMESVT GRALKDSIQI VSSFPDMEKA
201: YSKLKTLSYE VVVDVVPELK WNPEDGYKNM KVVVELGDEI DAKKACERQL RQKYKSLGAL KIVTERGLQV GDLAVVDISA TTIDEDGSTG QAIPDAESKG
301: FHFDTEEGNR LLPGFLDAII GIRAGESKSF TLVFPESWKQ ESLRGQRAQF TVDCKELFYR DLPTLDDSLA DKLLPGCTTL KEVEETLAKR CQEMEQEAKE
401: QATDNAILEQ IRKMVEVEIP QSLFEEQGRQ FYGARLLEIQ GNMKLNEDQL ASLSSQKAVN EFLETQRESI TNIIKQNIAV GDIFKRENLE FSTDELVKEV
501: ENSISEFKKH KQEFDEERVK DQVQEILEGA KVLEWLKDRA EIQYITR
Arabidopsis Description
TIGTrigger factor-like protein TIG, Chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8S9L5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.