Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G178900.1 | Wheat | cytosol | 31.73 | 54.1 |
| TraesCS7B01G083300.1 | Wheat | cytosol | 31.25 | 48.87 |
| EER89431 | Sorghum | plastid | 50.48 | 48.39 |
| TraesCS7B01G082900.1 | Wheat | plastid | 41.35 | 43.0 |
| HORVU7Hr1G036500.7 | Barley | plastid | 40.38 | 41.18 |
| TraesCS7A01G232500.1 | Wheat | plastid | 40.38 | 40.78 |
| TraesCS7B01G083100.1 | Wheat | plastid | 41.35 | 40.38 |
| TraesCS7D01G179300.1 | Wheat | plastid | 40.87 | 40.09 |
| TraesCS7D01G179000.1 | Wheat | plastid | 40.87 | 39.91 |
| TraesCS7D01G232600.1 | Wheat | plastid | 39.9 | 39.71 |
| TraesCS7D01G179200.1 | Wheat | cytosol, plastid | 39.9 | 39.71 |
| TraesCS7A01G236700.1 | Wheat | plastid | 40.38 | 39.62 |
| TraesCS7D01G179100.1 | Wheat | plastid | 40.87 | 39.53 |
| TraesCS7D01G179400.1 | Wheat | plastid | 39.9 | 39.52 |
| TraesCS7B01G083400.1 | Wheat | plastid | 40.38 | 39.44 |
| TraesCS7D01G179500.1 | Wheat | plastid | 40.38 | 39.07 |
| TraesCS7B01G083500.1 | Wheat | mitochondrion | 43.75 | 39.06 |
| TraesCS7B01G083200.2 | Wheat | plastid | 41.35 | 38.91 |
| TraesCS7A01G177600.1 | Wheat | plastid | 39.9 | 38.6 |
| TraesCS7D01G179600.1 | Wheat | mitochondrion | 43.27 | 38.46 |
| HORVU7Hr1G036570.2 | Barley | cytosol | 40.38 | 38.01 |
| TraesCS7A01G177700.1 | Wheat | cytosol, plastid | 39.42 | 37.96 |
| TraesCS7A01G177500.1 | Wheat | cytosol, plastid | 39.42 | 37.96 |
| Zm00001d052194_P001 | Maize | mitochondrion | 38.94 | 37.16 |
| KRH39841 | Soybean | mitochondrion | 25.48 | 36.05 |
| Solyc08g078700.2.1 | Tomato | plastid | 36.06 | 35.71 |
| PGSC0003DMT400012249 | Potato | mitochondrion | 36.06 | 35.55 |
| KRH23958 | Soybean | mitochondrion | 36.06 | 35.38 |
| GSMUA_Achr10P... | Banana | mitochondrion | 36.54 | 35.19 |
| CDY00476 | Canola | mitochondrion | 26.92 | 34.78 |
| HORVU7Hr1G036470.3 | Barley | cytosol, nucleus | 40.38 | 34.71 |
| TraesCS7B01G130900.1 | Wheat | plastid | 26.92 | 34.57 |
| TraesCS2B01G531300.1 | Wheat | plastid | 28.37 | 33.52 |
| HORVU7Hr1G036540.3 | Barley | mitochondrion, nucleus, plastid | 41.35 | 33.33 |
| VIT_16s0022g00510.t01 | Wine grape | mitochondrion | 33.17 | 33.17 |
| Bra028253.1-P | Field mustard | mitochondrion | 25.48 | 32.92 |
| CDX99920 | Canola | mitochondrion | 25.0 | 32.5 |
| VIT_02s0154g00490.t01 | Wine grape | mitochondrion | 31.25 | 32.34 |
| VIT_02s0154g00480.t01 | Wine grape | mitochondrion, plastid | 31.25 | 32.34 |
| CDY03368 | Canola | mitochondrion | 32.69 | 31.92 |
| TraesCS7A01G177800.1 | Wheat | nucleus | 35.1 | 31.74 |
| CDX89437 | Canola | mitochondrion | 32.21 | 31.46 |
| Bra013872.1-P | Field mustard | mitochondrion | 32.21 | 31.46 |
| AT5G51440.1 | Thale cress | mitochondrion | 31.73 | 31.43 |
| AT4G25200.1 | Thale cress | mitochondrion | 30.77 | 30.48 |
| CDY38862 | Canola | mitochondrion | 28.37 | 30.1 |
| Bra029174.1-P | Field mustard | mitochondrion | 28.37 | 29.95 |
| CDY32630 | Canola | mitochondrion | 22.6 | 27.65 |
| Os06t0219500-00 | Rice | mitochondrion | 36.06 | 24.27 |
| TraesCS5B01G123900.1 | Wheat | plastid | 25.0 | 21.76 |
| Solyc08g078710.1.1 | Tomato | mitochondrion | 18.75 | 19.9 |
| PGSC0003DMT400012247 | Potato | mitochondrion | 17.79 | 18.97 |
| Solyc08g078720.2.1 | Tomato | mitochondrion | 12.98 | 16.07 |
| PGSC0003DMT400012246 | Potato | plastid | 12.98 | 15.88 |
Protein Annotations
| EMBL:BT086018 | EnsemblPlants:Zm00001d044874_P001 | EnsemblPlants:Zm00001d044874_T001 | EnsemblPlantsGene:Zm00001d044874 | EntrezGene:100276133 | Gene3D:2.60.40.790 |
| InterPro:A-crystallin/Hsp20_dom | InterPro:HSP20 | InterPro:HSP20-like_chaperone | InterPro:IPR002068 | InterPro:IPR008978 | PANTHER:PTHR11527 |
| PANTHER:PTHR11527:SF176 | PFAM:PF00011 | PFscan:PS01031 | ProteinID:AQL01048.1 | SEG:seg | SUPFAM:SSF49764 |
| UniParc:UPI0001A4BE03 | UniProt:C4J5C1 | MapMan:35.1 | : | : | : |
Description
23.6 kDa heat shock protein mitochondrial
Coordinates
chr9:+:6096248..6097444
Molecular Weight (calculated)
22277.8 Da
IEP (calculated)
5.392
GRAVY (calculated)
-0.274
Length
208 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPGVASVLV PQEPVLLKDI IASPSPCGNT AVSARHLFGN GVAPPRSSDD GIKDVAADRH GDRDLSIPKI FTGDVLDLLD DAARLDLMLA LTGDGGAASM
101: AGFSARGWWV SKEDGNAVQL KVPMPGLGKE HVKMRVEKDA LVIKGEAGKD LEGDDDKGPA RYSYRIGLSS QAFKMDQIKA DMKNGVLRVT VPKIKDEERK
201: DVFEIKIE
101: AGFSARGWWV SKEDGNAVQL KVPMPGLGKE HVKMRVEKDA LVIKGEAGKD LEGDDDKGPA RYSYRIGLSS QAFKMDQIKA DMKNGVLRVT VPKIKDEERK
201: DVFEIKIE
001: MASSSALALR RLLSSSTVAV PRALRAVRPV AASSRLFNTN AARNYEDGVD RNHHSNRHVS RHGGDFFSHI LDPFTPTRSL SQMLNFMDQV SEIPLVSATR
101: GMGASGVRRG WNVKEKDDAL HLRIDMPGLS REDVKLALEQ NTLVIRGEGE TEEGEDVSGD GRRFTSRIEL PEKVYKTDEI KAEMKNGVLK VVIPKIKEDE
201: RNNIRHINVD
101: GMGASGVRRG WNVKEKDDAL HLRIDMPGLS REDVKLALEQ NTLVIRGEGE TEEGEDVSGD GRRFTSRIEL PEKVYKTDEI KAEMKNGVLK VVIPKIKEDE
201: RNNIRHINVD
Arabidopsis Description
HSP23.523.5 kDa heat shock protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FGM9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.