Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 6
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra013872.1-P | Field mustard | mitochondrion | 81.43 | 80.28 |
| CDX89437 | Canola | mitochondrion | 81.43 | 80.28 |
| CDY03368 | Canola | mitochondrion | 80.48 | 79.34 |
| AT5G51440.1 | Thale cress | mitochondrion | 67.14 | 67.14 |
| VIT_16s0022g00510.t01 | Wine grape | mitochondrion | 59.05 | 59.62 |
| KRH23958 | Soybean | mitochondrion | 58.1 | 57.55 |
| Solyc08g078700.2.1 | Tomato | plastid | 53.33 | 53.33 |
| PGSC0003DMT400012249 | Potato | mitochondrion | 52.38 | 52.13 |
| KRH39841 | Soybean | mitochondrion | 33.33 | 47.62 |
| GSMUA_Achr10P... | Banana | mitochondrion | 46.19 | 44.91 |
| TraesCS7D01G178900.1 | Wheat | cytosol | 25.71 | 44.26 |
| TraesCS7B01G083300.1 | Wheat | cytosol | 25.71 | 40.6 |
| Os02t0758000-01 | Rice | plastid | 42.38 | 40.45 |
| OQU85385 | Sorghum | mitochondrion | 41.43 | 39.37 |
| TraesCS6A01G316200.1 | Wheat | mitochondrion | 39.52 | 38.6 |
| Zm00001d052194_P001 | Maize | mitochondrion | 39.52 | 38.07 |
| TraesCS6D01G295500.1 | Wheat | mitochondrion | 39.05 | 37.96 |
| TraesCS6B01G346700.1 | Wheat | mitochondrion | 37.62 | 36.74 |
| TraesCS7D01G179200.1 | Wheat | cytosol, plastid | 36.19 | 36.36 |
| TraesCS7A01G236700.1 | Wheat | plastid | 36.67 | 36.32 |
| TraesCS7D01G179400.1 | Wheat | plastid | 36.19 | 36.19 |
| TraesCS7B01G082900.1 | Wheat | plastid | 34.29 | 36.0 |
| TraesCS7A01G232500.1 | Wheat | plastid | 35.24 | 35.92 |
| TraesCS7A01G177500.1 | Wheat | cytosol, plastid | 36.67 | 35.65 |
| TraesCS7A01G177700.1 | Wheat | cytosol, plastid | 36.67 | 35.65 |
| TraesCS7D01G179300.1 | Wheat | plastid | 35.71 | 35.38 |
| TraesCS7A01G177600.1 | Wheat | plastid | 36.19 | 35.35 |
| TraesCS7B01G083100.1 | Wheat | plastid | 35.71 | 35.21 |
| TraesCS7D01G179100.1 | Wheat | plastid | 35.71 | 34.88 |
| HORVU7Hr1G036500.7 | Barley | plastid | 33.81 | 34.8 |
| TraesCS7D01G232600.1 | Wheat | plastid | 34.29 | 34.45 |
| TraesCS7D01G179000.1 | Wheat | plastid | 34.76 | 34.27 |
| TraesCS7B01G083400.1 | Wheat | plastid | 34.76 | 34.27 |
| TraesCS7D01G179500.1 | Wheat | plastid | 34.76 | 33.95 |
| TraesCS7B01G083200.2 | Wheat | plastid | 35.71 | 33.94 |
| TraesCS7B01G083500.1 | Wheat | mitochondrion | 37.14 | 33.48 |
| TraesCS7D01G179600.1 | Wheat | mitochondrion | 36.67 | 32.91 |
| OQU76071 | Sorghum | plastid | 31.43 | 32.67 |
| HORVU7Hr1G036570.2 | Barley | cytosol | 34.29 | 32.58 |
| OQU75612 | Sorghum | plastid | 33.81 | 31.84 |
| OQU75930 | Sorghum | plastid | 33.81 | 31.84 |
| TraesCS7B01G130900.1 | Wheat | plastid | 23.81 | 30.86 |
| Zm00001d044874_P001 | Maize | cytosol, plastid | 30.48 | 30.77 |
| TraesCS2B01G531300.1 | Wheat | plastid | 25.71 | 30.68 |
| EER89431 | Sorghum | plastid | 30.95 | 29.95 |
| HORVU7Hr1G036470.3 | Barley | cytosol, nucleus | 34.29 | 29.75 |
| TraesCS7A01G177800.1 | Wheat | nucleus | 32.38 | 29.57 |
| HORVU7Hr1G036540.3 | Barley | mitochondrion, nucleus, plastid | 35.71 | 29.07 |
| EER89430 | Sorghum | plastid | 30.48 | 28.19 |
| KXG19616 | Sorghum | plastid | 32.38 | 25.28 |
| HORVU6Hr1G077710.3 | Barley | cytosol | 32.38 | 24.91 |
| TraesCS5B01G123900.1 | Wheat | plastid | 25.71 | 22.59 |
| Os06t0219500-00 | Rice | mitochondrion | 31.9 | 21.68 |
Protein Annotations
| MapMan:19.1.8.8 | Gene3D:2.60.40.790 | EntrezGene:828623 | InterPro:A-crystallin/Hsp20_dom | UniProt:A0A178USN5 | ProteinID:AEE85024.1 |
| EMBL:AK119118 | EMBL:AK317291 | ArrayExpress:AT4G25200 | EnsemblPlantsGene:AT4G25200 | RefSeq:AT4G25200 | TAIR:AT4G25200 |
| RefSeq:AT4G25200-TAIR-G | EnsemblPlants:AT4G25200.1 | TAIR:AT4G25200.1 | Symbol:ATHSP23.6-MITO | EMBL:BT005229 | ProteinID:CAA23061.1 |
| ProteinID:CAA67022.1 | ProteinID:CAB79429.1 | GO:GO:0003674 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0008150 | GO:GO:0046686 | InterPro:HSP20 | InterPro:HSP20-like_chaperone |
| InterPro:IPR002068 | InterPro:IPR008978 | RefSeq:NP_194250.1 | ProteinID:OAO96623.1 | PFAM:PF00011 | PO:PO:0000005 |
| PO:PO:0000293 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009046 | PO:PO:0009052 | PFscan:PS01031 | PANTHER:PTHR11527 | PANTHER:PTHR11527:SF238 | UniProt:Q96331 |
| SUPFAM:SSF49764 | EMBL:U72958 | UniParc:UPI000000420D | EMBL:Y11864 | SEG:seg | : |
Description
HSP23.6HSP23.6-MITO [Source:UniProtKB/TrEMBL;Acc:A0A178USN5]
Coordinates
chr4:+:12916926..12918110
Molecular Weight (calculated)
23611.1 Da
IEP (calculated)
7.040
GRAVY (calculated)
-0.649
Length
210 amino acids
Sequence
(BLAST)
(BLAST)
001: MASALALKRL LSSSIAPRSR SVLRPAVSSR LFNTNAVRSY DDDGENGDGV DLYRRSVPRR RGDFFSDVFD PFSPTRSVSQ VLNLMDQFME NPLLSATRGM
101: GASGARRGWD IKEKDDALYL RIDMPGLSRE DVKLALEQDT LVIRGEGKNE EDGGEEGESG NRRFTSRIGL PDKIYKIDEI KAEMKNGVLK VVIPKMKEQE
201: RNDVRQIEIN
101: GASGARRGWD IKEKDDALYL RIDMPGLSRE DVKLALEQDT LVIRGEGKNE EDGGEEGESG NRRFTSRIGL PDKIYKIDEI KAEMKNGVLK VVIPKMKEQE
201: RNDVRQIEIN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.