Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G179100.1 | Wheat | plastid | 90.57 | 89.3 |
| TraesCS7A01G177700.1 | Wheat | cytosol, plastid | 90.09 | 88.43 |
| TraesCS7A01G177500.1 | Wheat | cytosol, plastid | 90.09 | 88.43 |
| TraesCS7A01G232500.1 | Wheat | plastid | 83.02 | 85.44 |
| HORVU7Hr1G036500.7 | Barley | plastid | 79.72 | 82.84 |
| TraesCS7A01G177600.1 | Wheat | plastid | 83.96 | 82.79 |
| HORVU7Hr1G036570.2 | Barley | cytosol | 77.36 | 74.21 |
| HORVU7Hr1G036470.3 | Barley | cytosol, nucleus | 84.43 | 73.97 |
| HORVU7Hr1G036540.3 | Barley | mitochondrion, nucleus, plastid | 85.85 | 70.54 |
| TraesCS7A01G177800.1 | Wheat | nucleus | 75.47 | 69.57 |
| TraesCS6A01G316200.1 | Wheat | mitochondrion | 46.23 | 45.58 |
| OQU76071 | Sorghum | plastid | 41.51 | 43.56 |
| EER89430 | Sorghum | plastid | 45.28 | 42.29 |
| TraesCS5B01G123900.1 | Wheat | plastid | 47.17 | 41.84 |
| Solyc08g078700.2.1 | Tomato | plastid | 40.09 | 40.48 |
| Zm00001d044874_P001 | Maize | cytosol, plastid | 39.62 | 40.38 |
| PGSC0003DMT400012249 | Potato | mitochondrion | 40.09 | 40.28 |
| KRH39841 | Soybean | mitochondrion | 27.83 | 40.14 |
| OQU75612 | Sorghum | plastid | 41.98 | 39.91 |
| OQU75930 | Sorghum | plastid | 41.98 | 39.91 |
| KRH23958 | Soybean | mitochondrion | 38.68 | 38.68 |
| VIT_02s0154g00480.t01 | Wine grape | mitochondrion, plastid | 35.85 | 37.81 |
| AT5G51440.1 | Thale cress | mitochondrion | 37.26 | 37.62 |
| VIT_02s0154g00490.t01 | Wine grape | mitochondrion | 35.38 | 37.31 |
| CDY38862 | Canola | mitochondrion | 34.43 | 37.24 |
| Bra029174.1-P | Field mustard | mitochondrion | 34.43 | 37.06 |
| AT4G25200.1 | Thale cress | mitochondrion | 36.32 | 36.67 |
| VIT_16s0022g00510.t01 | Wine grape | mitochondrion | 35.85 | 36.54 |
| EER89431 | Sorghum | plastid | 36.79 | 35.94 |
| GSMUA_Achr10P... | Banana | mitochondrion | 36.32 | 35.65 |
| CDY32630 | Canola | mitochondrion | 28.3 | 35.29 |
| CDX89437 | Canola | mitochondrion | 35.38 | 35.21 |
| Bra013872.1-P | Field mustard | mitochondrion | 35.38 | 35.21 |
| CDY00476 | Canola | mitochondrion | 26.42 | 34.78 |
| CDY03368 | Canola | mitochondrion | 34.43 | 34.27 |
| CDX99920 | Canola | mitochondrion | 25.0 | 33.12 |
| Bra028253.1-P | Field mustard | mitochondrion | 24.06 | 31.68 |
| KXG19616 | Sorghum | plastid | 39.15 | 30.86 |
| Os06t0219500-00 | Rice | mitochondrion | 43.87 | 30.1 |
| PGSC0003DMT400012247 | Potato | mitochondrion | 20.75 | 22.56 |
| Solyc08g078710.1.1 | Tomato | mitochondrion | 20.75 | 22.45 |
| PGSC0003DMT400012246 | Potato | plastid | 15.57 | 19.41 |
| Solyc08g078720.2.1 | Tomato | mitochondrion | 14.62 | 18.45 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G236700.1 | EnsemblPlantsGene:TraesCS7A01G236700 | Gene3D:2.60.40.790 | InterPro:A-crystallin/Hsp20_dom | InterPro:HSP20 | InterPro:HSP20-like_chaperone |
| InterPro:IPR002068 | InterPro:IPR008978 | PANTHER:PTHR11527 | PANTHER:PTHR11527:SF176 | PFAM:PF00011 | PFscan:PS01031 |
| SUPFAM:SSF49764 | TIGR:cd06464 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr7A:+:210252308..210253445
Molecular Weight (calculated)
23235.5 Da
IEP (calculated)
5.175
GRAVY (calculated)
-0.426
Length
212 amino acids
Sequence
(BLAST)
(BLAST)
001: MASAVACKGA APVSPLKSGA PVTFCPLRSP AVTADRRPYN TQVKEASRYD DDNDYSGRDL VIPSFFSQDV LDPLSAPTSI ARLLSLMEDV ATQTGGLSST
101: ADAGASRLGR WVAKEDDDAV YLKVPMPGLT KEHVEVRADK NILVIKGEGE KQPWDGDDDS AVPRYNRRIE VPAADAYKMD KIKAEMKNGV LWVTLLKVKE
201: EERKDVFHVK VE
101: ADAGASRLGR WVAKEDDDAV YLKVPMPGLT KEHVEVRADK NILVIKGEGE KQPWDGDDDS AVPRYNRRIE VPAADAYKMD KIKAEMKNGV LWVTLLKVKE
201: EERKDVFHVK VE
001: MASSSALALR RLLSSSTVAV PRALRAVRPV AASSRLFNTN AARNYEDGVD RNHHSNRHVS RHGGDFFSHI LDPFTPTRSL SQMLNFMDQV SEIPLVSATR
101: GMGASGVRRG WNVKEKDDAL HLRIDMPGLS REDVKLALEQ NTLVIRGEGE TEEGEDVSGD GRRFTSRIEL PEKVYKTDEI KAEMKNGVLK VVIPKIKEDE
201: RNNIRHINVD
101: GMGASGVRRG WNVKEKDDAL HLRIDMPGLS REDVKLALEQ NTLVIRGEGE TEEGEDVSGD GRRFTSRIEL PEKVYKTDEI KAEMKNGVLK VVIPKIKEDE
201: RNNIRHINVD
Arabidopsis Description
HSP23.523.5 kDa heat shock protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FGM9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.