Factsheet for TraesCS2B01G269700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G244500.3	Wheat	plastid	96.81	94.27
HORVU2Hr1G056820.1	Barley	plastid	94.36	94.02
TraesCS2A01G239500.2	Wheat	plastid	96.94	92.62
KXG36530	Sorghum	plastid	81.62	81.32
Os07t0213300-01	Rice	cytosol	66.42	80.06
Zm00001d021871_P002	Maize	plastid	77.08	78.14
GSMUA_Achr7P21150_001	Banana	cytosol, plastid	60.05	58.47
VIT_08s0007g08590.t01	Wine grape	cytosol	57.48	55.05
KRH66918	Soybean	cytosol	55.88	54.48
AT2G41720.1	Thale cress	cytosol, plastid	54.04	53.65
CDY23832	Canola	plastid	53.19	53.06
Bra004642.1-P	Field mustard	cytosol, plastid	52.82	52.69
CDX79920	Canola	cytosol, plastid	52.7	52.63
Solyc04g015950.1.1	Tomato	plastid	54.78	52.59
KRG95241	Soybean	plastid	39.09	46.84
TraesCS7B01G401800.2	Wheat	plastid	21.08	21.1
TraesCS2B01G212000.1	Wheat	plastid	19.73	20.25
TraesCS7B01G307500.2	Wheat	cytosol	11.89	18.69
TraesCS7B01G033900.1	Wheat	plastid	11.4	18.34
TraesCS2B01G238300.1	Wheat	plastid	14.83	18.09
TraesCS4B01G359900.1	Wheat	plastid	10.66	17.3
TraesCS5B01G500100.1	Wheat	plastid	18.01	16.72
TraesCS6B01G332800.1	Wheat	plastid	11.52	16.61
TraesCS5B01G091600.1	Wheat	plastid	17.28	16.43
TraesCS4B01G138200.1	Wheat	cytosol, mitochondrion, plastid	10.29	15.94
TraesCS6B01G186300.2	Wheat	cytosol, mitochondrion	11.15	14.51

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	GO:GO:0000003	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198
GO:GO:0005488	GO:GO:0005515	GO:GO:0006139	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0008380	GO:GO:0009790	GO:GO:0009791	GO:GO:0009793	GO:GO:0009987	GO:GO:0010239
InterPro:IPR002885	InterPro:IPR011990	PFAM:PF01535	PFAM:PF12854	PFAM:PF13041	PFAM:PF13812
PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF1614	InterPro:Pentatricopeptide_repeat	SUPFAM:SSF48452	TIGRFAMs:TIGR00756
InterPro:TPR-like_helical_dom_sf	EnsemblPlantsGene:TraesCS2B01G269700	EnsemblPlants:TraesCS2B01G269700.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr2B:+:367657356..367709290

Molecular Weight (calculated)

91597.1 Da

IEP (calculated)

8.741

GRAVY (calculated)

-0.138

Length

816 amino acids

Sequence
(BLAST)

001: MSSATSPPPA SPNSEAPPRV VHPPPRRSPR SPGPPPWAKR RPSVSVDYDR GRRTVRVEVD GVGADALPAR HRLRVAGSRW QRDCKVSQVA ACVLALPRAD
101: THAVDTVLNC WAGRFARRNF PLLIREMAFS GSLQHAVYVF CWMKNQENYC ARNDIYGMMI RLHARHNQVD QARGLFFEMQ EWRCKPDADI YNSLINAHAR
201: AGLWRWAINI MDDMLRAAIP PSRATYNNVI NACGAAGNWK KALELCKKMI RNGVGPDLVT HNIVLSAFKN GSQYSEAIGY FEMMKGANIA PDTFTLNIVI
301: HCLVKVGQHG DAVDLLNSMR EKRAQCPPDV VTYTSIMHSY YVCGQVKNCK AVFDMMVAEG VKPNIVSYNA LLGAYASHGM HTEALGIFKL LKQNGLRPDV
401: VSYTTLLNAY GRSAQPEKAR EVFNEMRKNS CKPNKVSYNA LIDAYGSAGM FKEAISLLHE MEKDGIPPDV VSISTLLTAC GRCRQTTKID TVLEAAKFRG
501: IELNIVAYNS GIGSYLSFGD YEKALEFYAT MMASNVNPDA VTYNILISGL CKLGKYAESL KFFEDMVDLR IPLTKEVYSS LICSYVKQDK LAEAESTFSY
601: MKASGCFPDV LTYTAMIQAY TDHGSWTSVW DLFKEMEGNA ILPDAIICSS LMEALNKGNQ HERVLQLMRF MHDQCIQLNQ KAYFAIIASC SMLRDWKTAS
701: EIIEHLDSSL PSISVGKLNH LLNFLGKCGK TESMMKLFYK MVSSCSTVGL STYKVLLRNL LAVGKWRKYV EVLQWMEDAG VRPTLYMYQN VLPYIWRDNS
801: MDYVTLMQEK ISMLLL

Best Arabidopsis Sequence Match ( AT2G41720.1 )
(BLAST)

001: MATVTNFKLV TPPESSRADK PGATKASDAF QEKKSVSVNY DRGEHEVSVN IGGLRKADIP RRYRIRVEND RFQKDWSVSE VVDRLMALNR WEEVDGVLNS
101: WVGRFARKNF PVLIRELSRR GCIELCVNVF KWMKIQKNYC ARNDIYNMMI RLHARHNWVD QARGLFFEMQ KWSCKPDAET YDALINAHGR AGQWRWAMNL
201: MDDMLRAAIA PSRSTYNNLI NACGSSGNWR EALEVCKKMT DNGVGPDLVT HNIVLSAYKS GRQYSKALSY FELMKGAKVR PDTTTFNIII YCLSKLGQSS
301: QALDLFNSMR EKRAECRPDV VTFTSIMHLY SVKGEIENCR AVFEAMVAEG LKPNIVSYNA LMGAYAVHGM SGTALSVLGD IKQNGIIPDV VSYTCLLNSY
401: GRSRQPGKAK EVFLMMRKER RKPNVVTYNA LIDAYGSNGF LAEAVEIFRQ MEQDGIKPNV VSVCTLLAAC SRSKKKVNVD TVLSAAQSRG INLNTAAYNS
501: AIGSYINAAE LEKAIALYQS MRKKKVKADS VTFTILISGS CRMSKYPEAI SYLKEMEDLS IPLTKEVYSS VLCAYSKQGQ VTEAESIFNQ MKMAGCEPDV
601: IAYTSMLHAY NASEKWGKAC ELFLEMEANG IEPDSIACSA LMRAFNKGGQ PSNVFVLMDL MREKEIPFTG AVFFEIFSAC NTLQEWKRAI DLIQMMDPYL
701: PSLSIGLTNQ MLHLFGKSGK VEAMMKLFYK IIASGVGINL KTYAILLEHL LAVGNWRKYI EVLEWMSGAG IQPSNQMYRD IISFGERSAG IEFEPLIRQK
801: LESLRNKGEG LIPTFRHEGT LL

Arabidopsis Description

EMB2654EMB2654 [Source:UniProtKB/TrEMBL;Acc:A0A178VXZ9]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.