Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G193100.1 | Wheat | plastid | 97.74 | 97.98 |
| HORVU2Hr1G035060.2 | Barley | cytosol | 76.98 | 97.92 |
| TraesCS2A01G194800.1 | Wheat | endoplasmic reticulum, extracellular | 57.11 | 97.63 |
| Os07t0590600-00 | Rice | plastid | 79.5 | 80.61 |
| KXG36606 | Sorghum | plastid | 77.36 | 79.56 |
| Zm00001d022003_P001 | Maize | plastid | 78.74 | 78.74 |
| GSMUA_Achr6P16830_001 | Banana | cytosol | 46.67 | 66.01 |
| CDX71198 | Canola | cytosol | 40.13 | 56.36 |
| KRH27571 | Soybean | plastid | 38.24 | 56.3 |
| VIT_03s0091g00440.t01 | Wine grape | plastid | 51.07 | 50.06 |
| CDY32056 | Canola | plastid | 48.68 | 47.84 |
| Bra035290.1-P | Field mustard | plastid | 48.05 | 47.75 |
| PGSC0003DMT400066525 | Potato | plastid | 49.31 | 47.63 |
| KRG91073 | Soybean | plastid | 47.42 | 47.48 |
| Solyc01g107320.2.1 | Tomato | plastid | 48.8 | 47.37 |
| AT5G02860.2 | Thale cress | plastid | 48.3 | 46.89 |
| TraesCS7B01G401800.2 | Wheat | plastid | 32.33 | 31.53 |
| TraesCS7B01G033900.1 | Wheat | plastid | 15.47 | 24.26 |
| TraesCS2B01G238300.1 | Wheat | plastid | 19.25 | 22.87 |
| TraesCS7B01G307500.2 | Wheat | cytosol | 14.47 | 22.16 |
| TraesCS4B01G359900.1 | Wheat | plastid | 13.58 | 21.47 |
| TraesCS5B01G091600.1 | Wheat | plastid | 21.76 | 20.16 |
| TraesCS4B01G138200.1 | Wheat | cytosol, mitochondrion, plastid | 13.33 | 20.11 |
| TraesCS2B01G269700.1 | Wheat | plastid | 20.25 | 19.73 |
| TraesCS5B01G500100.1 | Wheat | plastid | 19.87 | 17.98 |
| TraesCS6B01G332800.1 | Wheat | plastid | 12.58 | 17.67 |
| TraesCS6B01G186300.2 | Wheat | cytosol, mitochondrion | 13.21 | 16.75 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G212000.1 | EnsemblPlantsGene:TraesCS2B01G212000 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002885 | InterPro:IPR011990 | InterPro:Pentatricopeptide_repeat | InterPro:TPR-like_helical_dom_sf | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF308 |
| PFAM:PF01535 | PFAM:PF12854 | PFAM:PF13041 | PFAM:PF13812 | PFscan:PS51375 | SEG:seg |
| TIGRFAMs:TIGR00756 | MapMan:16.12.4.3 | : | : | : | : |
Description
No Description!
Coordinates
chr2B:-:195691320..195693921
Molecular Weight (calculated)
87995.2 Da
IEP (calculated)
9.100
GRAVY (calculated)
-0.215
Length
795 amino acids
Sequence
(BLAST)
(BLAST)
001: MVETVAFPLP LPLRAPAPPP PTSKTFRHQP PVHSPLRLFS PTSLLSSSHP TPTSSSRTPR LGRPHNPTRQ GGGGGQPWNL PPSLSLPARR ALLSLLSNPD
101: SARDTLSALP TSELASVLNA LASRGRPTVA LAALHAARDL HGEHVLQHPC VLPAAVRVLA RAGRLTDASA LLDAAPEPDA SAYTALVSAF SRASRFRDAV
201: AVFRRMVANG IQPATVTYNV VLHVYSKIAV PWKDVLALVD SMKNDGIPLD RYTYNTLISC CRRGALYKEA AKVFGEMRAA GFEPDKVTFN SLLDVYGKAR
301: MHDAAIGVLK EMELGGCPPS VVTYNSLISS YVKDGLLKEA AELKEEMEVK GIQPDVITYT TLISGLDRAG KIDAAIGTYD EMLRNRCKPN LCTYNALIKL
401: HGVRGKFPEM MVVFDDLRSA GFVPDVVTWN TLLAVFGQNG LDSEVSGVFK EMKKSGYVPE RDTYVSLITS YSRCGLFDQS MEIYKRMIEA GIYPDISTYN
501: AVLSALARGG RWEQAEKLFA EMENLDCRPD ELSYSSLLHA YANAKKLDKM KALSEDIYAE KIESHHGLVK TLVLVNSKVN NLSETEKAFL ELRKRRCSLD
601: INVLNAMVSV YGKNRMVKKV EEILSLMKGS SINLSTATYN SLMHMYSRLG DCEKCENILT EIKSSGARPD RYSYNTMIYA YGRKGQMKEA SRLFSEMKSS
701: GLVPDIVTYN IFVKSYVANS MFEEAIDLVR YMVTHGCKPN ERTYNSILQE YCRHDKIADA KSFLSNLPQL HPGISKQEQQ RLLELLARHT SRDRG
101: SARDTLSALP TSELASVLNA LASRGRPTVA LAALHAARDL HGEHVLQHPC VLPAAVRVLA RAGRLTDASA LLDAAPEPDA SAYTALVSAF SRASRFRDAV
201: AVFRRMVANG IQPATVTYNV VLHVYSKIAV PWKDVLALVD SMKNDGIPLD RYTYNTLISC CRRGALYKEA AKVFGEMRAA GFEPDKVTFN SLLDVYGKAR
301: MHDAAIGVLK EMELGGCPPS VVTYNSLISS YVKDGLLKEA AELKEEMEVK GIQPDVITYT TLISGLDRAG KIDAAIGTYD EMLRNRCKPN LCTYNALIKL
401: HGVRGKFPEM MVVFDDLRSA GFVPDVVTWN TLLAVFGQNG LDSEVSGVFK EMKKSGYVPE RDTYVSLITS YSRCGLFDQS MEIYKRMIEA GIYPDISTYN
501: AVLSALARGG RWEQAEKLFA EMENLDCRPD ELSYSSLLHA YANAKKLDKM KALSEDIYAE KIESHHGLVK TLVLVNSKVN NLSETEKAFL ELRKRRCSLD
601: INVLNAMVSV YGKNRMVKKV EEILSLMKGS SINLSTATYN SLMHMYSRLG DCEKCENILT EIKSSGARPD RYSYNTMIYA YGRKGQMKEA SRLFSEMKSS
701: GLVPDIVTYN IFVKSYVANS MFEEAIDLVR YMVTHGCKPN ERTYNSILQE YCRHDKIADA KSFLSNLPQL HPGISKQEQQ RLLELLARHT SRDRG
001: MADKLALPLL LPCTPSSKPY SHDQNHHISR TPFLTTSLSS PPPPPVEPLL HDVFLHQNPN SRQPISSQTS RNRNRTRIGK SRDPNLGKPW SYHGLSPQGQ
101: QVLRSLIEPN FDSGQLDSVL SELFEPFKDK PESTSSELLA FLKGLGFHKK FDLALRAFDW FMKQKDYQSM LDNSVVAIII SMLGKEGRVS SAANMFNGLQ
201: EDGFSLDVYS YTSLISAFAN SGRYREAVNV FKKMEEDGCK PTLITYNVIL NVFGKMGTPW NKITSLVEKM KSDGIAPDAY TYNTLITCCK RGSLHQEAAQ
301: VFEEMKAAGF SYDKVTYNAL LDVYGKSHRP KEAMKVLNEM VLNGFSPSIV TYNSLISAYA RDGMLDEAME LKNQMAEKGT KPDVFTYTTL LSGFERAGKV
401: ESAMSIFEEM RNAGCKPNIC TFNAFIKMYG NRGKFTEMMK IFDEINVCGL SPDIVTWNTL LAVFGQNGMD SEVSGVFKEM KRAGFVPERE TFNTLISAYS
501: RCGSFEQAMT VYRRMLDAGV TPDLSTYNTV LAALARGGMW EQSEKVLAEM EDGRCKPNEL TYCSLLHAYA NGKEIGLMHS LAEEVYSGVI EPRAVLLKTL
601: VLVCSKCDLL PEAERAFSEL KERGFSPDIT TLNSMVSIYG RRQMVAKANG VLDYMKERGF TPSMATYNSL MYMHSRSADF GKSEEILREI LAKGIKPDII
701: SYNTVIYAYC RNTRMRDASR IFSEMRNSGI VPDVITYNTF IGSYAADSMF EEAIGVVRYM IKHGCRPNQN TYNSIVDGYC KLNRKDEAKL FVEDLRNLDP
801: HAPKGEDLRL LERIVKKWP
101: QVLRSLIEPN FDSGQLDSVL SELFEPFKDK PESTSSELLA FLKGLGFHKK FDLALRAFDW FMKQKDYQSM LDNSVVAIII SMLGKEGRVS SAANMFNGLQ
201: EDGFSLDVYS YTSLISAFAN SGRYREAVNV FKKMEEDGCK PTLITYNVIL NVFGKMGTPW NKITSLVEKM KSDGIAPDAY TYNTLITCCK RGSLHQEAAQ
301: VFEEMKAAGF SYDKVTYNAL LDVYGKSHRP KEAMKVLNEM VLNGFSPSIV TYNSLISAYA RDGMLDEAME LKNQMAEKGT KPDVFTYTTL LSGFERAGKV
401: ESAMSIFEEM RNAGCKPNIC TFNAFIKMYG NRGKFTEMMK IFDEINVCGL SPDIVTWNTL LAVFGQNGMD SEVSGVFKEM KRAGFVPERE TFNTLISAYS
501: RCGSFEQAMT VYRRMLDAGV TPDLSTYNTV LAALARGGMW EQSEKVLAEM EDGRCKPNEL TYCSLLHAYA NGKEIGLMHS LAEEVYSGVI EPRAVLLKTL
601: VLVCSKCDLL PEAERAFSEL KERGFSPDIT TLNSMVSIYG RRQMVAKANG VLDYMKERGF TPSMATYNSL MYMHSRSADF GKSEEILREI LAKGIKPDII
701: SYNTVIYAYC RNTRMRDASR IFSEMRNSGI VPDVITYNTF IGSYAADSMF EEAIGVVRYM IKHGCRPNQN TYNSIVDGYC KLNRKDEAKL FVEDLRNLDP
801: HAPKGEDLRL LERIVKKWP
Arabidopsis Description
Pentatricopeptide repeat-containing protein At5g02860 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYZ9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.