Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G194800.1 | Wheat | endoplasmic reticulum, extracellular | 57.38 | 97.85 |
| HORVU2Hr1G035060.2 | Barley | cytosol | 77.05 | 97.76 |
| TraesCS2B01G212000.1 | Wheat | plastid | 97.98 | 97.74 |
| Os07t0590600-00 | Rice | plastid | 80.33 | 81.25 |
| KXG36606 | Sorghum | plastid | 78.44 | 80.47 |
| Zm00001d022003_P001 | Maize | plastid | 79.95 | 79.75 |
| GSMUA_Achr6P16830_001 | Banana | cytosol | 46.53 | 65.66 |
| KRH27571 | Soybean | plastid | 38.71 | 56.85 |
| CDX71198 | Canola | cytosol | 40.48 | 56.71 |
| VIT_03s0091g00440.t01 | Wine grape | plastid | 51.45 | 50.31 |
| CDY32056 | Canola | plastid | 49.05 | 48.08 |
| Bra035290.1-P | Field mustard | plastid | 48.42 | 48.0 |
| KRG91073 | Soybean | plastid | 47.79 | 47.73 |
| PGSC0003DMT400066525 | Potato | plastid | 49.43 | 47.63 |
| Solyc01g107320.2.1 | Tomato | plastid | 48.93 | 47.37 |
| AT5G02860.2 | Thale cress | plastid | 48.68 | 47.13 |
| TraesCS7D01G482800.1 | Wheat | plastid | 32.53 | 31.7 |
| TraesCS7D01G400900.3 | Wheat | cytosol | 14.63 | 22.35 |
| TraesCS4D01G353200.2 | Wheat | cytosol | 13.62 | 22.27 |
| TraesCS5D01G097800.1 | Wheat | plastid | 21.94 | 20.33 |
| TraesCS4D01G132900.3 | Wheat | plastid | 13.49 | 19.78 |
| TraesCS2D01G244500.3 | Wheat | plastid | 20.3 | 19.21 |
| TraesCS6D01G282900.1 | Wheat | plastid | 12.74 | 18.7 |
| TraesCS5D01G500300.1 | Wheat | plastid | 19.8 | 18.05 |
| TraesCS6D01G147800.2 | Wheat | cytosol, mitochondrion | 13.24 | 17.71 |
| TraesCS3D01G529200.1 | Wheat | plastid | 13.37 | 17.35 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G193100.1 | EnsemblPlantsGene:TraesCS2D01G193100 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002885 | InterPro:IPR011990 | InterPro:Pentatricopeptide_repeat | InterPro:TPR-like_helical_dom_sf | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF308 |
| PFAM:PF01535 | PFAM:PF12854 | PFAM:PF13041 | PFAM:PF13812 | PFscan:PS51375 | SEG:seg |
| TIGRFAMs:TIGR00756 | MapMan:16.12.4.3 | : | : | : | : |
Description
No Description!
Coordinates
chr2D:-:137590307..137592688
Molecular Weight (calculated)
87817.1 Da
IEP (calculated)
9.157
GRAVY (calculated)
-0.206
Length
793 amino acids
Sequence
(BLAST)
(BLAST)
001: MVETVAFPLP LRAPAPPPPT SKIFRHQPPV HSPLRLFSPT SLLSSSHPTP TSSSRTPRLG RPHNPTRQGG GGGQPWNLPP SLSLPARRAL LSLLSDPDSA
101: RDILSALPTS ELAPVLNALA SRGRPGVALA ALHAARDLHG EHVLQHPRVL PAAVRVLARA GRLADASALL DAAPEPDASA YTALVSAFSR ASRFRDAVAV
201: FRRMVANGIQ PAIVTYNVVL HVYSKIAVPW KDVLALVDSM KKDGIPLDRY TYNTLISCCR RGALYKEAGK VFDEMRAAGF EPDKVTFNSL LDVYGKARMH
301: DAAIGVLKEM ELGGCPPSVV TYNSLISSYV KDGLLKEAAE LKEEMEFKGI QPDVITYTTL ISGLDRAGKI DAAIATYDEM LRNGCKPNLC TYNALIKLHG
401: VRGKFPEMMV VFDDLRSAGF VPDVVTWNTL LAVFGQNGLD SEVSGVFKEM KKSGYVPERD TYVSLISSYS RCGLFDQSME IYKRMIEAGI YPDISTYNAV
501: LSALARGGRW EQAEKLFAEM ENLDCRPDEL SYSSLLHAYA NAKKLDKMKA LSEDIYAEKI ESHHGLVKTL VLVNSKVNNL SETEKAFLEL RKRRCSLDIN
601: VLNAMVSVYG KNRMVKKVEE ILSLMKGSSI NLSTATYNSL MHMYSRLGDC EKCENILTEI KSSGARPDRY SYNTMIYAYG RKGQMKEASR LFSEMKSSGL
701: VPDIVTYNIF VKSYVANSMF EEAIDLVRYM VTHGCKPNQR TYNSILQEYC RHDKIADAKS FLSNLPQLHP GISKQEQQRL LELLARHTSR DRG
101: RDILSALPTS ELAPVLNALA SRGRPGVALA ALHAARDLHG EHVLQHPRVL PAAVRVLARA GRLADASALL DAAPEPDASA YTALVSAFSR ASRFRDAVAV
201: FRRMVANGIQ PAIVTYNVVL HVYSKIAVPW KDVLALVDSM KKDGIPLDRY TYNTLISCCR RGALYKEAGK VFDEMRAAGF EPDKVTFNSL LDVYGKARMH
301: DAAIGVLKEM ELGGCPPSVV TYNSLISSYV KDGLLKEAAE LKEEMEFKGI QPDVITYTTL ISGLDRAGKI DAAIATYDEM LRNGCKPNLC TYNALIKLHG
401: VRGKFPEMMV VFDDLRSAGF VPDVVTWNTL LAVFGQNGLD SEVSGVFKEM KKSGYVPERD TYVSLISSYS RCGLFDQSME IYKRMIEAGI YPDISTYNAV
501: LSALARGGRW EQAEKLFAEM ENLDCRPDEL SYSSLLHAYA NAKKLDKMKA LSEDIYAEKI ESHHGLVKTL VLVNSKVNNL SETEKAFLEL RKRRCSLDIN
601: VLNAMVSVYG KNRMVKKVEE ILSLMKGSSI NLSTATYNSL MHMYSRLGDC EKCENILTEI KSSGARPDRY SYNTMIYAYG RKGQMKEASR LFSEMKSSGL
701: VPDIVTYNIF VKSYVANSMF EEAIDLVRYM VTHGCKPNQR TYNSILQEYC RHDKIADAKS FLSNLPQLHP GISKQEQQRL LELLARHTSR DRG
001: MADKLALPLL LPCTPSSKPY SHDQNHHISR TPFLTTSLSS PPPPPVEPLL HDVFLHQNPN SRQPISSQTS RNRNRTRIGK SRDPNLGKPW SYHGLSPQGQ
101: QVLRSLIEPN FDSGQLDSVL SELFEPFKDK PESTSSELLA FLKGLGFHKK FDLALRAFDW FMKQKDYQSM LDNSVVAIII SMLGKEGRVS SAANMFNGLQ
201: EDGFSLDVYS YTSLISAFAN SGRYREAVNV FKKMEEDGCK PTLITYNVIL NVFGKMGTPW NKITSLVEKM KSDGIAPDAY TYNTLITCCK RGSLHQEAAQ
301: VFEEMKAAGF SYDKVTYNAL LDVYGKSHRP KEAMKVLNEM VLNGFSPSIV TYNSLISAYA RDGMLDEAME LKNQMAEKGT KPDVFTYTTL LSGFERAGKV
401: ESAMSIFEEM RNAGCKPNIC TFNAFIKMYG NRGKFTEMMK IFDEINVCGL SPDIVTWNTL LAVFGQNGMD SEVSGVFKEM KRAGFVPERE TFNTLISAYS
501: RCGSFEQAMT VYRRMLDAGV TPDLSTYNTV LAALARGGMW EQSEKVLAEM EDGRCKPNEL TYCSLLHAYA NGKEIGLMHS LAEEVYSGVI EPRAVLLKTL
601: VLVCSKCDLL PEAERAFSEL KERGFSPDIT TLNSMVSIYG RRQMVAKANG VLDYMKERGF TPSMATYNSL MYMHSRSADF GKSEEILREI LAKGIKPDII
701: SYNTVIYAYC RNTRMRDASR IFSEMRNSGI VPDVITYNTF IGSYAADSMF EEAIGVVRYM IKHGCRPNQN TYNSIVDGYC KLNRKDEAKL FVEDLRNLDP
801: HAPKGEDLRL LERIVKKWP
101: QVLRSLIEPN FDSGQLDSVL SELFEPFKDK PESTSSELLA FLKGLGFHKK FDLALRAFDW FMKQKDYQSM LDNSVVAIII SMLGKEGRVS SAANMFNGLQ
201: EDGFSLDVYS YTSLISAFAN SGRYREAVNV FKKMEEDGCK PTLITYNVIL NVFGKMGTPW NKITSLVEKM KSDGIAPDAY TYNTLITCCK RGSLHQEAAQ
301: VFEEMKAAGF SYDKVTYNAL LDVYGKSHRP KEAMKVLNEM VLNGFSPSIV TYNSLISAYA RDGMLDEAME LKNQMAEKGT KPDVFTYTTL LSGFERAGKV
401: ESAMSIFEEM RNAGCKPNIC TFNAFIKMYG NRGKFTEMMK IFDEINVCGL SPDIVTWNTL LAVFGQNGMD SEVSGVFKEM KRAGFVPERE TFNTLISAYS
501: RCGSFEQAMT VYRRMLDAGV TPDLSTYNTV LAALARGGMW EQSEKVLAEM EDGRCKPNEL TYCSLLHAYA NGKEIGLMHS LAEEVYSGVI EPRAVLLKTL
601: VLVCSKCDLL PEAERAFSEL KERGFSPDIT TLNSMVSIYG RRQMVAKANG VLDYMKERGF TPSMATYNSL MYMHSRSADF GKSEEILREI LAKGIKPDII
701: SYNTVIYAYC RNTRMRDASR IFSEMRNSGI VPDVITYNTF IGSYAADSMF EEAIGVVRYM IKHGCRPNQN TYNSIVDGYC KLNRKDEAKL FVEDLRNLDP
801: HAPKGEDLRL LERIVKKWP
Arabidopsis Description
Pentatricopeptide repeat-containing protein At5g02860 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYZ9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.