Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G269700.1 | Wheat | plastid | 94.27 | 96.81 |
| TraesCS2A01G239500.2 | Wheat | plastid | 95.82 | 94.03 |
| HORVU2Hr1G056820.1 | Barley | plastid | 91.17 | 93.28 |
| KXG36530 | Sorghum | plastid | 79.47 | 81.32 |
| Os07t0213300-01 | Rice | cytosol | 64.56 | 79.91 |
| Zm00001d021871_P002 | Maize | plastid | 75.66 | 78.76 |
| GSMUA_Achr7P21150_001 | Banana | cytosol, plastid | 58.71 | 58.71 |
| VIT_08s0007g08590.t01 | Wine grape | cytosol | 56.44 | 55.52 |
| KRH66918 | Soybean | cytosol | 54.42 | 54.48 |
| AT2G41720.1 | Thale cress | cytosol, plastid | 52.86 | 53.89 |
| CDY23832 | Canola | plastid | 52.03 | 53.3 |
| Bra004642.1-P | Field mustard | cytosol, plastid | 51.67 | 52.93 |
| Solyc04g015950.1.1 | Tomato | plastid | 53.58 | 52.82 |
| CDX79920 | Canola | cytosol, plastid | 51.43 | 52.75 |
| KRG95241 | Soybean | plastid | 37.95 | 46.7 |
| TraesCS7D01G482800.1 | Wheat | plastid | 20.64 | 21.25 |
| TraesCS2D01G193100.1 | Wheat | plastid | 19.21 | 20.3 |
| TraesCS7D01G400900.3 | Wheat | cytosol | 11.58 | 18.69 |
| TraesCS5D01G500300.1 | Wheat | plastid | 17.78 | 17.13 |
| TraesCS4D01G353200.2 | Wheat | cytosol | 9.9 | 17.11 |
| TraesCS6D01G282900.1 | Wheat | plastid | 10.86 | 16.85 |
| TraesCS5D01G097800.1 | Wheat | plastid | 17.06 | 16.71 |
| TraesCS4D01G132900.3 | Wheat | plastid | 10.26 | 15.9 |
| TraesCS3D01G529200.1 | Wheat | plastid | 11.58 | 15.88 |
| TraesCS6D01G147800.2 | Wheat | cytosol, mitochondrion | 10.62 | 15.01 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.1 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008380 | GO:GO:0009790 | GO:GO:0009791 | GO:GO:0009793 | GO:GO:0009987 | GO:GO:0010239 |
| InterPro:IPR002885 | InterPro:IPR011990 | PFAM:PF01535 | PFAM:PF12854 | PFAM:PF13041 | PFAM:PF13812 |
| PFscan:PS51375 | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF1614 | InterPro:Pentatricopeptide_repeat | SUPFAM:SSF48452 | TIGRFAMs:TIGR00756 |
| InterPro:TPR-like_helical_dom_sf | EnsemblPlantsGene:TraesCS2D01G244500 | EnsemblPlants:TraesCS2D01G244500.3 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr2D:-:274848387..274863295
Molecular Weight (calculated)
93999.0 Da
IEP (calculated)
8.674
GRAVY (calculated)
-0.137
Length
838 amino acids
Sequence
(BLAST)
(BLAST)
001: MHNGRALPPT AAMSSATLPP PASPNPEAPP RVVRPPPRRS PRSPGPPLWA KRRPSVSVDY DRGRRTVRVE VDGVGADALP ARHRLRVEGS RWQRDCKVSQ
101: VAARVLALPR ADTHAVDAVL NCWAGRFACR NFPLLIREMA FSGSLQHAVY VFCWMKNQEN YCARNDIYGM MIRLHARHNQ VDQARGLFFE MQEWRCKPDA
201: DIYNSLINAH ARAGLWRWAI NIMDDMLRAA IPPSRATYNN VINACGAAGN WKKALELCKK MIRNGVGPDL VTHNIVLSAF KNGSQYSEAI GYFEMMKGAN
301: IAPDTFTLNI VIHCLVKAGQ HGDAVDLLNS MREKRAQCPP DVVTYTSIMH SYYVCGQVKD CKAVFDMMVA EGVKPNIVSY NALLGAYASH GMHTEALGVF
401: KLLKQNGLRP DVVSYTTLLN AYGRSAQPEK AREVFNEMRK NSCKPNKVSY NALIDAYGSA GMFKEAISLL HEMEKDGIPP DVVSISTLLT ACGRCRQTTK
501: IDTVLEAAKF RGIELNIVAY NSGIGSYLSF GDYEKALEFY AAMMASNVNP DAVTYNILIS GLCKLGKYAE SLKFFEDMVD LQIPLTKEVY SSLICSYVKQ
601: DKLAEAESTF SYMKTSGCFP DVLTYTAMIQ AYIDHGSWTS VWDLFKEMEG NAILPDAIIC SSLMEALNKG NQHERVLQLM KFMHDRSIQL NQKAYFEIIA
701: SCSMLRDWRT ASEIIEHLDS SLPSISVGKL NHLLNFLGKC GKTESMMKLF YKMVSSCSTV GLSTYKVLLR NLLAVGKWRK YVEVLQWMED AGVRPTLYMY
801: QNVLPYIWRD NSMDCVTLMQ EKIRSVIFCN SFCTGNIF
101: VAARVLALPR ADTHAVDAVL NCWAGRFACR NFPLLIREMA FSGSLQHAVY VFCWMKNQEN YCARNDIYGM MIRLHARHNQ VDQARGLFFE MQEWRCKPDA
201: DIYNSLINAH ARAGLWRWAI NIMDDMLRAA IPPSRATYNN VINACGAAGN WKKALELCKK MIRNGVGPDL VTHNIVLSAF KNGSQYSEAI GYFEMMKGAN
301: IAPDTFTLNI VIHCLVKAGQ HGDAVDLLNS MREKRAQCPP DVVTYTSIMH SYYVCGQVKD CKAVFDMMVA EGVKPNIVSY NALLGAYASH GMHTEALGVF
401: KLLKQNGLRP DVVSYTTLLN AYGRSAQPEK AREVFNEMRK NSCKPNKVSY NALIDAYGSA GMFKEAISLL HEMEKDGIPP DVVSISTLLT ACGRCRQTTK
501: IDTVLEAAKF RGIELNIVAY NSGIGSYLSF GDYEKALEFY AAMMASNVNP DAVTYNILIS GLCKLGKYAE SLKFFEDMVD LQIPLTKEVY SSLICSYVKQ
601: DKLAEAESTF SYMKTSGCFP DVLTYTAMIQ AYIDHGSWTS VWDLFKEMEG NAILPDAIIC SSLMEALNKG NQHERVLQLM KFMHDRSIQL NQKAYFEIIA
701: SCSMLRDWRT ASEIIEHLDS SLPSISVGKL NHLLNFLGKC GKTESMMKLF YKMVSSCSTV GLSTYKVLLR NLLAVGKWRK YVEVLQWMED AGVRPTLYMY
801: QNVLPYIWRD NSMDCVTLMQ EKIRSVIFCN SFCTGNIF
001: MATVTNFKLV TPPESSRADK PGATKASDAF QEKKSVSVNY DRGEHEVSVN IGGLRKADIP RRYRIRVEND RFQKDWSVSE VVDRLMALNR WEEVDGVLNS
101: WVGRFARKNF PVLIRELSRR GCIELCVNVF KWMKIQKNYC ARNDIYNMMI RLHARHNWVD QARGLFFEMQ KWSCKPDAET YDALINAHGR AGQWRWAMNL
201: MDDMLRAAIA PSRSTYNNLI NACGSSGNWR EALEVCKKMT DNGVGPDLVT HNIVLSAYKS GRQYSKALSY FELMKGAKVR PDTTTFNIII YCLSKLGQSS
301: QALDLFNSMR EKRAECRPDV VTFTSIMHLY SVKGEIENCR AVFEAMVAEG LKPNIVSYNA LMGAYAVHGM SGTALSVLGD IKQNGIIPDV VSYTCLLNSY
401: GRSRQPGKAK EVFLMMRKER RKPNVVTYNA LIDAYGSNGF LAEAVEIFRQ MEQDGIKPNV VSVCTLLAAC SRSKKKVNVD TVLSAAQSRG INLNTAAYNS
501: AIGSYINAAE LEKAIALYQS MRKKKVKADS VTFTILISGS CRMSKYPEAI SYLKEMEDLS IPLTKEVYSS VLCAYSKQGQ VTEAESIFNQ MKMAGCEPDV
601: IAYTSMLHAY NASEKWGKAC ELFLEMEANG IEPDSIACSA LMRAFNKGGQ PSNVFVLMDL MREKEIPFTG AVFFEIFSAC NTLQEWKRAI DLIQMMDPYL
701: PSLSIGLTNQ MLHLFGKSGK VEAMMKLFYK IIASGVGINL KTYAILLEHL LAVGNWRKYI EVLEWMSGAG IQPSNQMYRD IISFGERSAG IEFEPLIRQK
801: LESLRNKGEG LIPTFRHEGT LL
101: WVGRFARKNF PVLIRELSRR GCIELCVNVF KWMKIQKNYC ARNDIYNMMI RLHARHNWVD QARGLFFEMQ KWSCKPDAET YDALINAHGR AGQWRWAMNL
201: MDDMLRAAIA PSRSTYNNLI NACGSSGNWR EALEVCKKMT DNGVGPDLVT HNIVLSAYKS GRQYSKALSY FELMKGAKVR PDTTTFNIII YCLSKLGQSS
301: QALDLFNSMR EKRAECRPDV VTFTSIMHLY SVKGEIENCR AVFEAMVAEG LKPNIVSYNA LMGAYAVHGM SGTALSVLGD IKQNGIIPDV VSYTCLLNSY
401: GRSRQPGKAK EVFLMMRKER RKPNVVTYNA LIDAYGSNGF LAEAVEIFRQ MEQDGIKPNV VSVCTLLAAC SRSKKKVNVD TVLSAAQSRG INLNTAAYNS
501: AIGSYINAAE LEKAIALYQS MRKKKVKADS VTFTILISGS CRMSKYPEAI SYLKEMEDLS IPLTKEVYSS VLCAYSKQGQ VTEAESIFNQ MKMAGCEPDV
601: IAYTSMLHAY NASEKWGKAC ELFLEMEANG IEPDSIACSA LMRAFNKGGQ PSNVFVLMDL MREKEIPFTG AVFFEIFSAC NTLQEWKRAI DLIQMMDPYL
701: PSLSIGLTNQ MLHLFGKSGK VEAMMKLFYK IIASGVGINL KTYAILLEHL LAVGNWRKYI EVLEWMSGAG IQPSNQMYRD IISFGERSAG IEFEPLIRQK
801: LESLRNKGEG LIPTFRHEGT LL
Arabidopsis Description
EMB2654EMB2654 [Source:UniProtKB/TrEMBL;Acc:A0A178VXZ9]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.