Factsheet for TraesCS5D01G097800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G091600.1	Wheat	plastid	98.48	98.25
TraesCS5A01G085800.1	Wheat	plastid	98.01	97.79
HORVU5Hr1G022350.1	Barley	plastid	56.89	94.75
Os12t0562300-01	Rice	cytosol	31.19	87.25
EES16159	Sorghum	plastid	85.16	83.6
Zm00001d030624_P001	Maize	plastid	84.0	82.64
GSMUA_Achr2P02090_001	Banana	cytosol	55.26	72.77
CDY15384	Canola	cytosol	26.64	53.52
PGSC0003DMT400018827	Potato	cytosol	44.39	50.26
CDY19091	Canola	cytosol	42.29	49.66
Bra018247.1-P	Field mustard	nucleus	17.52	49.51
VIT_07s0005g01660.t01	Wine grape	plastid	48.95	48.33
Solyc06g009520.2.1	Tomato	nucleus, plastid	46.38	47.21
CDY56616	Canola	plastid	42.29	45.88
CDY10802	Canola	plastid	45.09	45.47
Bra019526.1-P	Field mustard	cytosol	13.43	43.56
AT2G31400.1	Thale cress	plastid	46.5	43.36
Bra018246.1-P	Field mustard	plastid	24.3	42.11
KRH45156	Soybean	plastid	42.06	41.0
KRH01436	Soybean	plastid	41.47	40.57
Bra021733.1-P	Field mustard	cytosol	43.81	34.15
TraesCS2D01G193100.1	Wheat	plastid	20.33	21.94
TraesCS5D01G500300.1	Wheat	plastid	19.98	19.66
TraesCS7D01G400900.3	Wheat	cytosol	11.92	19.65
TraesCS7D01G482800.1	Wheat	plastid	18.57	19.53
TraesCS4D01G353200.2	Wheat	cytosol	10.63	18.76
TraesCS6D01G282900.1	Wheat	plastid	11.57	18.33
TraesCS4D01G132900.3	Wheat	plastid	11.1	17.56
TraesCS2D01G244500.3	Wheat	plastid	16.71	17.06
TraesCS3D01G529200.1	Wheat	plastid	11.45	16.04
TraesCS6D01G147800.2	Wheat	cytosol, mitochondrion	10.51	15.18

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR002625
InterPro:IPR002885	InterPro:IPR011990	PFAM:PF12854	PFAM:PF13041	PFAM:PF13812	PFscan:PS50828
PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF366	InterPro:Pentatricopeptide_repeat	SMART:SM00463	SUPFAM:SSF160443
SUPFAM:SSF48452	InterPro:Smr_dom	InterPro:Smr_dom_sf	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	EnsemblPlantsGene:TraesCS5D01G097800
EnsemblPlants:TraesCS5D01G097800.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5D:+:108515892..108520024

Molecular Weight (calculated)

92970.0 Da

IEP (calculated)

8.533

GRAVY (calculated)

0.004

Length

856 amino acids

Sequence
(BLAST)

001: MAPTTHFTPS QAHAAATSHH PAAAAAAATA TARLHASASA SAPAAAAALC PPFLAAGSHS VTCPPVQNPI FSGPAAPWAV QPQRAAAGAL GPEFRRARST
101: KNISKRNNRG AGGQERGARA SSAAAGRCVD KLLRVAPEDR RALGASLSSF RGELVGPDDY CHVLRELGDR DKSALRALEV FHAALPLVGN GSVDKGKLLT
201: AAIGALGKMG RPDLARRGFD SGIAGGYGKT VFAYSALISA YARSGLATEA MGVLESMKGA GLRPTTVTYN AVIDACGKGG VDLRFTLGYF RQMLRDGLCP
301: DRKTFNSLLS ACSRAGHLED ARAVFDEMIH LGIGRDIYTY NTFIDAICKC GNIELAMQVL LDMEAKKLKP NVVTYSTLID GYSKLEKYEE ALKLYEKMKS
401: LGIRLDRVCY NTVLAIYVKT GKYAEIAIVC DEMEDSGIEK DTVTYNSLIN GYGKQGRLDI VSFLVQDMRR RGVAPSVLTY STLIDIYSKA GMHGDAFNVY
501: LDFKESGLKA DVVLFSSFID TLAKNGLVEW ALSLLNDMTE MGIKPNVVTY NTIIDAFGKS KVHAEEDPEV GEMGIVGVYN GQIIRAANPV TRGRSAIDVR
601: MRRSQELYFI LELFQKMVQQ GVRPNVVTFS AILNACSRCN NFEDAALLLE QLRLFDNFVY GVAYGLLMGY QEIWSQAQSL FNQLGRMDSP TSSAFYNALT
701: DMLWHFGQRQ GAQLIVLEGV NRRVWENTWS EFCLDLHLMS CGAAQAMVHA WLLNVRSIVF EGRAMPEFVS ILTGWGKHSK IAGASTLRHV IEALLNSIGA
801: PFQVERFNIG RFVSPSVVVA AWLKESGTIN TILLSDERAQ RASPSNLVPR LEALQL

Best Arabidopsis Sequence Match ( AT2G31400.1 )
(BLAST)

001: MASTPPHWVT TTNNHRPWLP QRPRPGRSVT SAPPSSSASV SSAHLSQTTP NFSPLQTPKS DFSGRQSTRF VSPATNNHRQ TRQNPNYNHR PYGASSSPRG
101: SAPPPSSVAT VAPAQLSQPP NFSPLQTPKS DLSSDFSGRR STRFVSKMHF GRQKTTMATR HSSAAEDALQ NAIDFSGDDE MFHSLMLSFE SKLCGSDDCT
201: YIIRELGNRN ECDKAVGFYE FAVKRERRKN EQGKLASAMI STLGRYGKVT IAKRIFETAF AGGYGNTVYA FSALISAYGR SGLHEEAISV FNSMKEYGLR
301: PNLVTYNAVI DACGKGGMEF KQVAKFFDEM QRNGVQPDRI TFNSLLAVCS RGGLWEAARN LFDEMTNRRI EQDVFSYNTL LDAICKGGQM DLAFEILAQM
401: PVKRIMPNVV SYSTVIDGFA KAGRFDEALN LFGEMRYLGI ALDRVSYNTL LSIYTKVGRS EEALDILREM ASVGIKKDVV TYNALLGGYG KQGKYDEVKK
501: VFTEMKREHV LPNLLTYSTL IDGYSKGGLY KEAMEIFREF KSAGLRADVV LYSALIDALC KNGLVGSAVS LIDEMTKEGI SPNVVTYNSI IDAFGRSATM
601: DRSADYSNGG SLPFSSSALS ALTETEGNRV IQLFGQLTTE SNNRTTKDCE EGMQELSCIL EVFRKMHQLE IKPNVVTFSA ILNACSRCNS FEDASMLLEE
701: LRLFDNKVYG VVHGLLMGQR ENVWLQAQSL FDKVNEMDGS TASAFYNALT DMLWHFGQKR GAELVALEGR SRQVWENVWS DSCLDLHLMS SGAARAMVHA
801: WLLNIRSIVY EGHELPKVLS ILTGWGKHSK VVGDGALRRA VEVLLRGMDA PFHLSKCNMG RFTSSGSVVA TWLRESATLK LLILHDHITT ATATTTTMKS
901: TDQQQRKQTS FALQPLLL

Arabidopsis Description

GUN1Pentatricopeptide repeat-containing protein At2g31400, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SIC9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.