Factsheet for Bra021733.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 3
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19091	Canola	cytosol	66.3	99.86
Bra018247.1-P	Field mustard	nucleus	23.13	83.83
Bra019526.1-P	Field mustard	cytosol	18.31	76.14
AT2G31400.1	Thale cress	plastid	59.02	70.59
Bra018246.1-P	Field mustard	plastid	29.05	64.57
PGSC0003DMT400018827	Potato	cytosol	43.62	63.36
VIT_07s0005g01660.t01	Wine grape	plastid	49.91	63.21
Solyc06g009520.2.1	Tomato	nucleus, plastid	43.17	56.36
GSMUA_Achr2P02090_001	Banana	cytosol	32.79	55.38
Os12t0562300-01	Rice	cytosol	15.39	55.23
KRH45156	Soybean	plastid	35.34	44.19
TraesCS5B01G091600.1	Wheat	plastid	34.24	43.82
TraesCS5A01G085800.1	Wheat	plastid	34.24	43.82
TraesCS5D01G097800.1	Wheat	plastid	34.15	43.81
KRH01436	Soybean	plastid	34.79	43.66
Zm00001d030624_P001	Maize	plastid	34.24	43.22
EES16159	Sorghum	plastid	33.88	42.66
HORVU5Hr1G022350.1	Barley	plastid	16.67	35.6
Bra035290.1-P	Field mustard	plastid	14.85	20.38
Bra015889.1-P	Field mustard	plastid	15.94	20.25
Bra006974.1-P	Field mustard	cytosol, endoplasmic reticulum	8.65	19.04
Bra024454.1-P	Field mustard	plastid	14.03	18.85
Bra017881.1-P	Field mustard	plastid	11.84	18.57
Bra004642.1-P	Field mustard	cytosol, plastid	13.48	18.09
Bra011847.1-P	Field mustard	plastid	7.47	16.87
Bra037464.1-P	Field mustard	plastid	8.11	16.64
Bra035352.1-P	Field mustard	mitochondrion	6.65	15.15
Bra020748.1-P	Field mustard	plastid	6.74	15.07
Bra005366.1-P	Field mustard	cytosol, mitochondrion, nucleus	9.56	13.82

Protein Annotations

Gene3D:1.25.40.10	MapMan:3.1.4.4	Gene3D:3.30.1370.110	Gene3D:3.40.1190.20	EnsemblPlantsGene:Bra021733	EnsemblPlants:Bra021733.1
EnsemblPlants:Bra021733.1-P	InterPro:Carboh/pur_kinase_PfkB_CS	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0016773	InterPro:IPR002625	InterPro:IPR002885	InterPro:IPR011990	InterPro:IPR029056	UniProt:M4DYY6
PFAM:PF00294	PFAM:PF01535	PFAM:PF01713	PFAM:PF13041	PFAM:PF13812	PRINTS:PR00990
ScanProsite:PS00583	ScanProsite:PS00584	PFscan:PS50828	PFscan:PS51375	PANTHER:PTHR43085	PANTHER:PTHR43085:SF6
InterPro:Pentatricopeptide_repeat	InterPro:PfkB_dom	InterPro:Ribo/fructo_kinase	InterPro:Ribokinase-like	SMART:SM00463	SUPFAM:SSF160443
SUPFAM:SSF53613	InterPro:Smr_dom	InterPro:Smr_dom_sf	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI0002544B90
SEG:seg	:	:	:	:	:

Description

AT2G31400 (E=0.0) | pentatricopeptide (PPR) repeat-containing protein

Coordinates

chrA04:+:14150113..14156660

Molecular Weight (calculated)

120580.0 Da

IEP (calculated)

6.711

GRAVY (calculated)

-0.114

Length

1098 amino acids

Sequence
(BLAST)

0001: MHFGRPKTTT SSSRHSSAAE EALRTAITFS GEDQTFQSLI SSFELRGSDD YTFILRELGN RGECDKAVTF YEFAVLRERR KIEQGKLASA MIGTLGRLGK
0101: VSIAKRVFEE ALSGGYGNTV YAFSAIISAF GRSGLHEEAI SVFTSMKSYN LRPNLVTYNA VIDACGKGGM EFKQVAEFLY EMQRNNVQPD RITFNSLLAV
0201: CSRGGLWEAA RNLFDEMSKR GIEQDVFTYN TLLDAICKGG KMDMAFEILS QMPSKRIMPN VVSYSAVIDG FAKAGRFDEA LNLFDEMKYL GIALDRVSYN
0301: TLLSIYTKLG RSKEALDVLR EMASVGIKKD VVTYNALLGG YGKQRNYLEV KNVFAEMKRE RVTPNLLTYS TLIDVYSKGG LYKEAMEIFK EFKGAGLRAD
0401: VVLYSALIDA LCKNGLVGSA VSLIDEMTKE GISPNVVTYN SIIDAFGRSA TVECLAESGD GGVGSSSLLP SLSKLAETED NQVMQIFGKL TIESSNRGKK
0501: DCKEGMHELS SILEVIRKMH QLEIKPNVVT FSAILNACSR CNSFEDASVL LEELRLFDNQ VYGVVHGLLK GHRENVWLQA QSLFDKVNEM DGSTAAAFYN
0601: ALTDMLWHFG QKRGAQLVAL EGRSRQVWEN VWSESCLDLH LMSSGAARAM VHAWLLNIRS IVYEGHELPK LLSILTGWGK HSKVVGDAAL RPAVEALLRG
0701: MDAPFYLSKC NMGRFTSSGS VVATWLRESA TLKLLIVHDH VTTKASTTRG PAEQHEQTSL TLQPLLLSRP LLQWLHPTAR KDSSSASARC SSTSSPPNPA
0801: SLAEAPGFLK APGGAPANVA IAVSRLGGRS AFVGKLGDDE FGHMLAGILK ENGVADQGIN FDTGARTALA FVTLRADGDR EFMFYRNPSA DMLLRPDELD
0901: LDLIRSAKVF HYGSISLIVE PCRSAHLKAM EVAKEAGAIL SYDPNLREPL WPSNEEAKTQ IMSIWDKAEI IKVSDVELEF LTGSNKIDDE TAMSLWHPNL
1001: KLLLVTLGEK GCRYYAKTFR GSVDPFHVNA VDTTGAGDSF VGALLNKIAE DQSILEDEER LRKVLRFANA CGAITTTKKG AIPALPTDAE VLSFLEGK

Best Arabidopsis Sequence Match ( AT2G31400.1 )
(BLAST)

001: MASTPPHWVT TTNNHRPWLP QRPRPGRSVT SAPPSSSASV SSAHLSQTTP NFSPLQTPKS DFSGRQSTRF VSPATNNHRQ TRQNPNYNHR PYGASSSPRG
101: SAPPPSSVAT VAPAQLSQPP NFSPLQTPKS DLSSDFSGRR STRFVSKMHF GRQKTTMATR HSSAAEDALQ NAIDFSGDDE MFHSLMLSFE SKLCGSDDCT
201: YIIRELGNRN ECDKAVGFYE FAVKRERRKN EQGKLASAMI STLGRYGKVT IAKRIFETAF AGGYGNTVYA FSALISAYGR SGLHEEAISV FNSMKEYGLR
301: PNLVTYNAVI DACGKGGMEF KQVAKFFDEM QRNGVQPDRI TFNSLLAVCS RGGLWEAARN LFDEMTNRRI EQDVFSYNTL LDAICKGGQM DLAFEILAQM
401: PVKRIMPNVV SYSTVIDGFA KAGRFDEALN LFGEMRYLGI ALDRVSYNTL LSIYTKVGRS EEALDILREM ASVGIKKDVV TYNALLGGYG KQGKYDEVKK
501: VFTEMKREHV LPNLLTYSTL IDGYSKGGLY KEAMEIFREF KSAGLRADVV LYSALIDALC KNGLVGSAVS LIDEMTKEGI SPNVVTYNSI IDAFGRSATM
601: DRSADYSNGG SLPFSSSALS ALTETEGNRV IQLFGQLTTE SNNRTTKDCE EGMQELSCIL EVFRKMHQLE IKPNVVTFSA ILNACSRCNS FEDASMLLEE
701: LRLFDNKVYG VVHGLLMGQR ENVWLQAQSL FDKVNEMDGS TASAFYNALT DMLWHFGQKR GAELVALEGR SRQVWENVWS DSCLDLHLMS SGAARAMVHA
801: WLLNIRSIVY EGHELPKVLS ILTGWGKHSK VVGDGALRRA VEVLLRGMDA PFHLSKCNMG RFTSSGSVVA TWLRESATLK LLILHDHITT ATATTTTMKS
901: TDQQQRKQTS FALQPLLL

Arabidopsis Description

GUN1Pentatricopeptide repeat-containing protein At2g31400, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SIC9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.