CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH01436	Soybean	plastid	94.53	94.86
CDY15384	Canola	cytosol	27.11	55.87
VIT_07s0005g01660.t01	Wine grape	plastid	52.05	52.71
Bra018247.1-P	Field mustard	nucleus	18.11	52.48
PGSC0003DMT400018827	Potato	cytosol	44.87	52.12
CDY19091	Canola	cytosol	42.37	51.03
Os12t0562300-01	Rice	cytosol	17.54	50.33
CDY56616	Canola	plastid	44.42	49.43
GSMUA_Achr2P02090_001	Banana	cytosol	36.56	49.38
Solyc06g009520.2.1	Tomato	nucleus, plastid	47.15	49.23
CDY10802	Canola	plastid	47.15	48.76
Bra019526.1-P	Field mustard	cytosol	14.35	47.73
AT2G31400.1	Thale cress	plastid	47.84	45.75
Bra018246.1-P	Field mustard	plastid	24.83	44.13
TraesCS5A01G085800.1	Wheat	plastid	41.34	42.31
TraesCS5D01G097800.1	Wheat	plastid	41.0	42.06
TraesCS5B01G091600.1	Wheat	plastid	40.89	41.84
Zm00001d030624_P001	Maize	plastid	40.43	40.8
EES16159	Sorghum	plastid	40.2	40.48
Bra021733.1-P	Field mustard	cytosol	44.19	35.34
HORVU5Hr1G022350.1	Barley	plastid	20.27	34.63
KRH03384	Soybean	nucleus	20.27	20.72
KRH56998	Soybean	nucleus	20.16	20.63
KRG91073	Soybean	plastid	18.0	19.9
KRH51622	Soybean	cytosol, plastid	15.6	19.68
KRH57931	Soybean	cytosol	2.39	19.63
KRH60945	Soybean	plastid	15.03	19.35
KRH14115	Soybean	plastid	10.14	18.5
KRH66918	Soybean	cytosol	17.31	18.16
KRH12254	Soybean	plastid	16.86	17.85
KRG90623	Soybean	nucleus	11.39	17.79
KRH36131	Soybean	plastid	11.16	17.72
KRH46714	Soybean	plastid	10.25	17.48
KRH37281	Soybean	plastid	16.51	17.47
KRH27571	Soybean	plastid	10.02	16.3
KRG95241	Soybean	plastid	12.41	16.01
KRH37687	Soybean	plastid	8.77	15.88
KRG90712	Soybean	cytosol, endoplasmic reticulum, plastid	11.05	15.52
KRH27783	Soybean	cytosol, plastid	9.23	15.52
KRH59429	Soybean	plastid	8.77	15.31
KRH77730	Soybean	plastid	9.11	15.3
KRH02371	Soybean	plastid	8.43	15.16
KRH02451	Soybean	plastid	8.43	15.16
KRH43291	Soybean	plastid	8.77	14.64

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:100794695	MapMan:35.1	EMBL:ACUP02004996	ncoils:Coil	EnsemblPlantsGene:GLYMA_08G254000
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004518	GO:GO:0004519
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009451	GO:GO:0009507	GO:GO:0009536
GO:GO:0009987	GO:GO:0016787	GO:GO:0090305	UniProt:I1KWM1	InterPro:IPR002625	InterPro:IPR002885
InterPro:IPR011990	EnsemblPlants:KRH45156	ProteinID:KRH45156	ProteinID:KRH45156.1	PFAM:PF01535	PFAM:PF13041
PFAM:PF13812	PFscan:PS50828	PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF366	InterPro:Pentatricopeptide_repeat
SMART:SM00463	SUPFAM:SSF160443	InterPro:Smr_dom	InterPro:Smr_dom_sf	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf
UniParc:UPI0002338107	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:22419811..22424099

Molecular Weight (calculated)

98132.6 Da

IEP (calculated)

8.523

GRAVY (calculated)

-0.274

Length

878 amino acids

Sequence
(BLAST)

001: MASTPTPRPH FSSVPPIPSN NNQRHHHNQN RSHHRRNNNR NRWSSSSTRF YSSPASSAGA GAGVPSAAAT ASAAFSSSLS PWLGAQKTRL APEFSGRRSN
101: RNPGKMNSGG PRAVPNNQQH SKAAEEVLHS LTNAGNDVSA IDSVLLHYRL YVAEDYVYLL KEFANTGDLL LATRTYDFAM SRATDNTFMG KLTSNMIRTL
201: GRLKKIELAL DLFEESRTRG YGNTVYSFSA MISALGRNNR FSEAVSLLRS MGKFGLEPNL VTYNAIIDAG AKGELTFEIV VKFLEEMIAA GCMPDRLTYN
301: SLLKTCVAKG RWKLCRDLLA EMEWKGIGRD VYTYNTYVDA LCKGGRMDLA RHAIDVEMPA KNIWPNVVTY STLMAGYSKA ERFEDALNIY DEMKHLLIRL
401: DRVSYNTLVG LYANLGWFEE AVGKFKEMEC CGIKNDVVTY NALIEGYGRH NKYVEVQKLF DEMKARRIYP NDLTYSTLIK IYTKGRMYAE AMDVYRELKQ
501: EGMKTDVVFY SALIDALCKN GLIESSLRLL DVMTEKGSRP NVVTYNSIID AFKIGQQLPA LECAVDTPFQ ANEHQIKPSS SRLIVGNFQD QKTDIGNNDE
601: IMKMLEQLAA EKAGLTKKDK RSRQDNFFIV QIFQKMHEME IKPNVVTFSA ILNACSCCET FQDASKLLDA LRVFDSQVYG VAHGLLMGHR QGIWDQTQTL
701: FDELEHLDSS TASAFYNALT DMLWHFGQKL GAQMVVIEGR NRNVWKGGWS TESLDLHLTS CGAACAMVHT WLLELRTTVF GGQKLPPILS ILTGWGKHSK
801: VVGNGTLRKA VEALLNGIGA PFQISECNLG RFKSEGPEVA AWLRQPSTLN VLLLHDCIVY SQPVERNQTF NIPSLGAL

Best Arabidopsis Sequence Match ( AT2G31400.1 )
(BLAST)

001: MASTPPHWVT TTNNHRPWLP QRPRPGRSVT SAPPSSSASV SSAHLSQTTP NFSPLQTPKS DFSGRQSTRF VSPATNNHRQ TRQNPNYNHR PYGASSSPRG
101: SAPPPSSVAT VAPAQLSQPP NFSPLQTPKS DLSSDFSGRR STRFVSKMHF GRQKTTMATR HSSAAEDALQ NAIDFSGDDE MFHSLMLSFE SKLCGSDDCT
201: YIIRELGNRN ECDKAVGFYE FAVKRERRKN EQGKLASAMI STLGRYGKVT IAKRIFETAF AGGYGNTVYA FSALISAYGR SGLHEEAISV FNSMKEYGLR
301: PNLVTYNAVI DACGKGGMEF KQVAKFFDEM QRNGVQPDRI TFNSLLAVCS RGGLWEAARN LFDEMTNRRI EQDVFSYNTL LDAICKGGQM DLAFEILAQM
401: PVKRIMPNVV SYSTVIDGFA KAGRFDEALN LFGEMRYLGI ALDRVSYNTL LSIYTKVGRS EEALDILREM ASVGIKKDVV TYNALLGGYG KQGKYDEVKK
501: VFTEMKREHV LPNLLTYSTL IDGYSKGGLY KEAMEIFREF KSAGLRADVV LYSALIDALC KNGLVGSAVS LIDEMTKEGI SPNVVTYNSI IDAFGRSATM
601: DRSADYSNGG SLPFSSSALS ALTETEGNRV IQLFGQLTTE SNNRTTKDCE EGMQELSCIL EVFRKMHQLE IKPNVVTFSA ILNACSRCNS FEDASMLLEE
701: LRLFDNKVYG VVHGLLMGQR ENVWLQAQSL FDKVNEMDGS TASAFYNALT DMLWHFGQKR GAELVALEGR SRQVWENVWS DSCLDLHLMS SGAARAMVHA
801: WLLNIRSIVY EGHELPKVLS ILTGWGKHSK VVGDGALRRA VEVLLRGMDA PFHLSKCNMG RFTSSGSVVA TWLRESATLK LLILHDHITT ATATTTTMKS
901: TDQQQRKQTS FALQPLLL

Arabidopsis Description

GUN1Pentatricopeptide repeat-containing protein At2g31400, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SIC9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.